| GenBank top hits | e value | %identity | Alignment |
|---|
| QXO02104.1 RNA polymerase beta'' subunit [Arabidopsis thaliana] | 1.7e-10 | 40.62 | Show/hide |
Query: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIP-LENPKQISRGGER
TGRAL+E + I +G K+ + + S +ETAR + R L E +LGGMIPVG GF+ + HRS +HN I LE K+I+ E+
Subjt: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIP-LENPKQISRGGER
Query: ---FCSTTNNYCIFAFQRIYMIEQNKHF
FCSTT + IF+FQ+I I Q+ HF
Subjt: ---FCSTTNNYCIFAFQRIYMIEQNKHF
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| YP_009236270.1 DNA-directed RNA polymerase beta'' chain [Gynostemma pentaphyllum] | 3.1e-09 | 43.59 | Show/hide |
Query: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGER-
TGRALEE++ I +G K+ + + S +ETAR + R L E +LGGMIPVG GFRELAHRSR+HNNIPLE PK GE
Subjt: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGER-
Query: -----------FCSTTN
FC +TN
Subjt: -----------FCSTTN
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| YP_009440321.1 RNA polymerase beta subunit-2 [Gynostemma pubescens] | 3.1e-09 | 43.59 | Show/hide |
Query: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGER-
TGRALEE++ I +G K+ + + S +ETAR + R L E +LGGMIPVG GFRELAHRSR+HNNIPLE PK GE
Subjt: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGER-
Query: -----------FCSTTN
FC +TN
Subjt: -----------FCSTTN
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| YP_009768069.1 RNA polymerase beta'' subunit [Euchresta japonica] | 1.7e-10 | 40.62 | Show/hide |
Query: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIP-LENPKQISRGGER
TGRAL+E + I +G K+ + + S +ETAR + R L E +LGGMIPVG GF+ + HRS +HN I LE K+I+ E+
Subjt: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIP-LENPKQISRGGER
Query: ---FCSTTNNYCIFAFQRIYMIEQNKHF
FCSTT + IF+FQ+I I Q+ HF
Subjt: ---FCSTTNNYCIFAFQRIYMIEQNKHF
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| YP_010006685.1 RNA polymerase beta'' subunit [Passiflora cerradensis] | 3.7e-10 | 42.52 | Show/hide |
Query: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQ---ISRG-
TGRALEE + ++G ++ + + S +ETAR + R L E +LGGMIPVG GF+ L HRSR+H +IPL K+ SRG
Subjt: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQ---ISRG-
Query: GERFCSTTNNYCIFAFQRIYMIEQNKH
E F STT +Y I AFQ+ MI QNK+
Subjt: GERFCSTTNNYCIFAFQRIYMIEQNKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A109X1E5 DNA-directed RNA polymerase subunit beta'' | 1.5e-09 | 43.59 | Show/hide |
Query: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGER-
TGRALEE++ I +G K+ + + S +ETAR + R L E +LGGMIPVG GFRELAHRSR+HNNIPLE PK GE
Subjt: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGER-
Query: -----------FCSTTN
FC +TN
Subjt: -----------FCSTTN
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| A0A191T460 DNA-directed RNA polymerase subunit beta'' | 1.5e-09 | 43.59 | Show/hide |
Query: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGER-
TGRALEE++ I +G K+ + + S +ETAR + R L E +LGGMIPVG GFRELAHRSR+HNNIPLE PK GE
Subjt: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGER-
Query: -----------FCSTTN
FC +TN
Subjt: -----------FCSTTN
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| A0A286QM57 DNA-directed RNA polymerase subunit beta'' | 1.5e-09 | 43.59 | Show/hide |
Query: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGER-
TGRALEE++ I +G K+ + + S +ETAR + R L E +LGGMIPVG GFRELAHRSR+HNNIPLE PK GE
Subjt: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGER-
Query: -----------FCSTTN
FC +TN
Subjt: -----------FCSTTN
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| A0A6H0E8P3 DNA-directed RNA polymerase | 8.0e-11 | 40.62 | Show/hide |
Query: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIP-LENPKQISRGGER
TGRAL+E + I +G K+ + + S +ETAR + R L E +LGGMIPVG GF+ + HRS +HN I LE K+I+ E+
Subjt: TGRALEELVSEPPI-IGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIP-LENPKQISRGGER
Query: ---FCSTTNNYCIFAFQRIYMIEQNKHF
FCSTT + IF+FQ+I I Q+ HF
Subjt: ---FCSTTNNYCIFAFQRIYMIEQNKHF
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| A0A7H0TWQ0 DNA-directed RNA polymerase subunit beta'' | 1.8e-10 | 42.52 | Show/hide |
Query: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQ---ISRG-
TGRALEE + ++G ++ + + S +ETAR + R L E +LGGMIPVG GF+ L HRSR+H +IPL K+ SRG
Subjt: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQ---ISRG-
Query: GERFCSTTNNYCIFAFQRIYMIEQNKH
E F STT +Y I AFQ+ MI QNK+
Subjt: GERFCSTTNNYCIFAFQRIYMIEQNKH
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A0ZZ25 DNA-directed RNA polymerase subunit beta'' | 4.7e-08 | 40.82 | Show/hide |
Query: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGE
TGRALEE + ++G ++ + + S +ETAR + R L E +LGGMIP G GF+ L HRSR+HNNI LE K+ GGE
Subjt: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGE
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| A6MM26 DNA-directed RNA polymerase subunit beta'' | 2.1e-08 | 40.82 | Show/hide |
Query: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGE
TGRALEE + ++G ++ + + S +ETAR + R L E +LGG+IPVG GF+ L HRSR+HNNIPLE K+ GE
Subjt: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGE
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| Q09G56 DNA-directed RNA polymerase subunit beta'' | 2.1e-08 | 41.84 | Show/hide |
Query: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGE
TGRALEE + ++G ++ + + S +ETAR + R L E +LGGMIPVG GF+ L HRSR+HNNIPLE K+ GE
Subjt: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQISRGGE
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| Q09X27 DNA-directed RNA polymerase subunit beta'' | 3.6e-08 | 41.3 | Show/hide |
Query: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQ
TGRAL+E + + ++G K+ + + S +ETAR + R L E +LGGMIPVG GF+ L HRS++HNNIPLE K+
Subjt: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLENPKQ
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| Q4VZP3 DNA-directed RNA polymerase subunit beta'' | 3.5e-11 | 47 | Show/hide |
Query: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLEN-PKQISRGGER
TGRALEE + ++G K+ + + S +ETAR + R L E +LGGMIPVG GFRELAHRSR+HNNIPLE PK+I G R
Subjt: TGRALEELVS-EPPIIGNNKSIYKYSTNKNIGSKKETARQKPPSEYR-----LGERSERELLGGMIPVGAGFRELAHRSRKHNNIPLEN-PKQISRGGER
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