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CmaCh08G006800 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G006800
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionthionin-like protein 2
Genome locationCma_Chr08:4175176..4175796
RNA-Seq ExpressionCmaCh08G006800
SyntenyCmaCh08G006800
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593441.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]9.4e-5598.15Show/hide
Query:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKS+VVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLF ASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
Subjt:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        CSRTCLKA
Subjt:  CSRTCLKA

KAG7014098.1 Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma]2.0e-4478.7Show/hide
Query:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKSVV+ICFILSL+AGRSTASF KCYAKCFI CAITPG+ +GTCG  CLA CLF+ASAP D NH++THYFCKLGCATS+CTKFSTK DP+EKKVE CV+S
Subjt:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        C+ TC+KA
Subjt:  CSRTCLKA

KAG7025781.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-5497.22Show/hide
Query:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKS+VVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLF ASAP DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
Subjt:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        CSRTCLKA
Subjt:  CSRTCLKA

XP_023000407.1 thionin-like protein 2 [Cucurbita maxima]1.1e-55100Show/hide
Query:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
Subjt:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        CSRTCLKA
Subjt:  CSRTCLKA

XP_038899787.1 thionin-like protein 2 [Benincasa hispida]2.0e-4985.19Show/hide
Query:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKSV++ICFI+SLV GRSTASFGKCYAKCF+VCAITPG+PIGTCG KCL DCLF+AS+P D NHLDTHYFCKLGCATSLCTKFSTK DPAEKKVESCVNS
Subjt:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        C +TC+KA
Subjt:  CSRTCLKA

TrEMBL top hitse value%identityAlignment
A0A067E0U5 Uncharacterized protein5.4e-2452.38Show/hide
Query:  SVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCS
        S++++  +  L+ G+S A+F +CY  CFI+C ITPG  +G+C  KCL DC+F       L+  DT YFCKLGCATSLCT  S+K +PA +KVE CVNSCS
Subjt:  SVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCS

Query:  RTCLK
        ++C K
Subjt:  RTCLK

A0A0A0KC18 Uncharacterized protein1.1e-4079.41Show/hide
Query:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKSVV+ICFILSLVAGRSTASFGKCYAKCFIVCAITPG+P+GTCG KCLADCLF+AS+P DLN++DTHYFCKLGCATS CTKFSTK DP +K   + V +
Subjt:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CS
         S
Subjt:  CS

A0A5D3BCH5 Thionin-like protein 21.5e-2657.66Show/hide
Query:  MKSVVVICFILSLVAGRST--ASFGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESC
        M+S+V+I FILSLVAGRST      K + KC   CAI P +P +  C  KC+ADC+ +AS+P DLN +DTHYFCKLGC T  CTK STK D  E KVE+C
Subjt:  MKSVVVICFILSLVAGRST--ASFGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESC

Query:  VNSCSRTCLKA
         N+C +TC+KA
Subjt:  VNSCSRTCLKA

A0A6J1DDL8 thionin-like protein 27.3e-3771.03Show/hide
Query:  VVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLF-LASAPRDLN-HLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSC
        ++++  +LSLVAG+STASFGKCYAKCF+VCAITPG+P+GTC  KCL DCLF  AS   D N  +DT YFCKLGCATSLCTKFSTK DPAEKKV SCV+SC
Subjt:  VVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLF-LASAPRDLN-HLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSC

Query:  SRTCLKA
        S+ C+ A
Subjt:  SRTCLKA

A0A6J1KDK0 thionin-like protein 25.4e-56100Show/hide
Query:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
Subjt:  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        CSRTCLKA
Subjt:  CSRTCLKA

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 21.4e-0834.55Show/hide
Query:  SVVVICFILSLVAGRSTAS--FGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLASAPR-DLNHLD-THYFCKLGCATSLCTKFSTKTDPAEKKVESC
        +V+++  I +L+A  +     F +CY  C + C      P    C   C  +CL   S P    N++D + YFCKLGCAT  C   S+  +P  ++V +C
Subjt:  SVVVICFILSLVAGRSTAS--FGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLASAPR-DLNHLD-THYFCKLGCATSLCTKFSTKTDPAEKKVESC

Query:  VNSCSRTCLK
        V+SCS  C K
Subjt:  VNSCSRTCLK

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.9.8e-1034.55Show/hide
Query:  SVVVICFILSLVAGRSTAS--FGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLASAPR-DLNHLD-THYFCKLGCATSLCTKFSTKTDPAEKKVESC
        +V+++  I +L+A  +     F +CY  C + C      P    C   C  +CL   S P    N++D + YFCKLGCAT  C   S+  +P  ++V +C
Subjt:  SVVVICFILSLVAGRSTAS--FGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLASAPR-DLNHLD-THYFCKLGCATSLCTKFSTKTDPAEKKVESC

Query:  VNSCSRTCLK
        V+SCS  C K
Subjt:  VNSCSRTCLK

AT1G12672.1 unknown protein2.5e-0546.67Show/hide
Query:  DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTC
        ++NH D  Y+CKLGC+T  C   S+  +P   KV  CV+SCS  C
Subjt:  DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTC

AT1G12672.2 unknown protein3.9e-0641.94Show/hide
Query:  CLADCLFLASAPRD----LNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTC
        C+  CL   S+  D    +NH D  Y+CKLGC+T  C   S+  +P   KV  CV+SCS  C
Subjt:  CLADCLFLASAPRD----LNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCCGTTGTTGTAATATGCTTCATTCTGAGCTTAGTTGCAGGCAGGTCCACAGCCTCCTTTGGGAAGTGCTACGCCAAGTGCTTCATTGTGTGTGCTATC
ACACCAGGCGTCCCTATTGGCACATGCGGCGGAAAGTGCTTGGCTGATTGCCTCTTCCTTGCCTCTGCCCCTAGAGATCTCAACCATTTGGACACTCATTATTTC
TGCAAACTTGGCTGTGCCACTTCTCTCTGCACCAAATTTAGCACCAAGACAGACCCAGCTGAGAAGAAAGTGGAAAGTTGTGTGAACTCGTGCTCTCGAACATGT
TTGAAGGCTTAA
mRNA sequenceShow/hide mRNA sequence
CGTCAATGCTTCAATCATTTGGGTTTCGGCAAAGGAAGTGTTTATTTAAGAAACACTCTTTCCCACAGCCCCAAACCACAGAAAGCAAGAAAAATGAAGTCCGTT
GTTGTAATATGCTTCATTCTGAGCTTAGTTGCAGGCAGGTCCACAGCCTCCTTTGGGAAGTGCTACGCCAAGTGCTTCATTGTGTGTGCTATCACACCAGGCGTC
CCTATTGGCACATGCGGCGGAAAGTGCTTGGCTGATTGCCTCTTCCTTGCCTCTGCCCCTAGAGATCTCAACCATTTGGACACTCATTATTTCTGCAAACTTGGC
TGTGCCACTTCTCTCTGCACCAAATTTAGCACCAAGACAGACCCAGCTGAGAAGAAAGTGGAAAGTTGTGTGAACTCGTGCTCTCGAACATGTTTGAAGGCTTAA
Protein sequenceShow/hide protein sequence
MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTC
LKA