; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh08G007790 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G007790
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionNeurofilament heavy protein
Genome locationCma_Chr08:4699644..4700572
RNA-Seq ExpressionCmaCh08G007790
SyntenyCmaCh08G007790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593528.1 hypothetical protein SDJN03_13004, partial [Cucurbita argyrosperma subsp. sororia]3.4e-3793.33Show/hide
Query:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN
        MEDPKT MKDSSSEEDA+SINIFERLKEE+EAVIHSHESP HHKETHGTS+DIDETTPADEVKAPG+FERVKEEIEALVETIHPKKDSSN
Subjt:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN

XP_023000451.1 uncharacterized protein LOC111494718 isoform X1 [Cucurbita maxima]1.9e-4098.91Show/hide
Query:  MEDPKTPMKDSSS-EEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSNR
        MEDPKTPMKDSSS EEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSNR
Subjt:  MEDPKTPMKDSSS-EEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSNR

XP_023000452.1 uncharacterized protein LOC111494718 isoform X2 [Cucurbita maxima]7.7e-42100Show/hide
Query:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSNR
        MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSNR
Subjt:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSNR

XP_023515025.1 uncharacterized protein LOC111779175 isoform X1 [Cucurbita pepo subsp. pepo]5.7e-3794.51Show/hide
Query:  MEDPKTPMKDSSS-EEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN
        MEDPKTPMKDSSS EEDA+SINIFERLKEEMEAVIHSHESP HHKETHGT +DIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN
Subjt:  MEDPKTPMKDSSS-EEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN

XP_023515027.1 uncharacterized protein LOC111779175 isoform X2 [Cucurbita pepo subsp. pepo]2.3e-3895.56Show/hide
Query:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN
        MEDPKTPMKDSSSEEDA+SINIFERLKEEMEAVIHSHESP HHKETHGT +DIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN
Subjt:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN

TrEMBL top hitse value%identityAlignment
A0A0A0KAY9 Uncharacterized protein1.3e-2674.44Show/hide
Query:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN
        ME+ KT +K SSSE + KS NIFER KEE+EAVIH ++SP HHKETHG S+DIDETTPADEVKAPGVF RVKEE+EALV  IHPKKDS +
Subjt:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN

A0A6J1CRC8 uncharacterized protein LOC111014044 isoform X11.1e-2876.92Show/hide
Query:  MEDPKTPMKDSSSE-EDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN
        ME+PKT +KDSSSE +DAK+ N+FER KEE+EA++HS++SP HHKETHG S+DIDETTP+DEVKAPGVF RVKEEIEALV TIHPKKDS N
Subjt:  MEDPKTPMKDSSSE-EDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN

A0A6J1CT17 uncharacterized protein LOC111014044 isoform X22.8e-2976.67Show/hide
Query:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN
        ME+PKT +KDSSS +DAK+ N+FER KEE+EA++HS++SP HHKETHG S+DIDETTP+DEVKAPGVF RVKEEIEALV TIHPKKDS N
Subjt:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSN

A0A6J1KDN6 uncharacterized protein LOC111494718 isoform X23.7e-42100Show/hide
Query:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSNR
        MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSNR
Subjt:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSNR

A0A6J1KFX0 uncharacterized protein LOC111494718 isoform X19.2e-4198.91Show/hide
Query:  MEDPKTPMKDSSS-EEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSNR
        MEDPKTPMKDSSS EEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSNR
Subjt:  MEDPKTPMKDSSS-EEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G17490.1 unknown protein4.1e-0943.18Show/hide
Query:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDS
        M +PK      SS  + K+ N+    KEE E++ H        KETHG S DIDE T  D+VK PGV  R+ EE+EA+V+ + P K S
Subjt:  MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDS

AT1G72690.1 unknown protein2.4e-1754.88Show/hide
Query:  KDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHH--KETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDS
        ++ S E+  KS N+FER+KEE+EA+ H  +S   H  KETHGTS+DIDE+TP D VK PG F+R+KEEIEA+   + PK+ S
Subjt:  KDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHH--KETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDS

AT5G57000.1 unknown protein1.5e-1446.51Show/hide
Query:  KTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESP----CHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKK
        K   K    E+  K  N+ ++ +E+++++    + P     HHKETHG S+DI E TP DEVKAP V ER KEEIEA+++TIH KK
Subjt:  KTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESP----CHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKK

AT5G57000.2 unknown protein1.2e-1347.13Show/hide
Query:  KTPMKDSSSEEDA-KSINIFERLKEEMEAVIHSHESP----CHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKK
        K  M+  S + D  K  N+ ++ +E+++++    + P     HHKETHG S+DI E TP DEVKAP V ER KEEIEA+++TIH KK
Subjt:  KTPMKDSSSEEDA-KSINIFERLKEEMEAVIHSHESP----CHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCCAAAGACTCCAATGAAAGATTCTTCTTCAGAAGAAGATGCAAAATCAATCAATATTTTTGAGAGACTTAAAGAAGAGATGGAGGCTGTGATTCACTCTCA
TGAATCACCTTGCCATCACAAAGAAACACATGGAACAAGCAATGATATTGACGAGACTACACCAGCCGATGAAGTAAAGGCCCCCGGCGTGTTTGAAAGAGTCAAGGAAG
AGATTGAGGCCCTCGTAGAAACGATTCATCCCAAGAAGGATTCGAGCAATCGTTAG
mRNA sequenceShow/hide mRNA sequence
CGAGCATACACGAGTGAGACGGGGTTAATCGATTCCACGGGAAAGCTCGAATGGAGGATCCAAAGACTCCAATGAAAGATTCTTCTTCAGAAGAAGATGCAAAATCAATC
AATATTTTTGAGAGACTTAAAGAAGAGATGGAGGCTGTGATTCACTCTCATGAATCACCTTGCCATCACAAAGAAACACATGGAACAAGCAATGATATTGACGAGACTAC
ACCAGCCGATGAAGTAAAGGCCCCCGGCGTGTTTGAAAGAGTCAAGGAAGAGATTGAGGCCCTCGTAGAAACGATTCATCCCAAGAAGGATTCGAGCAATCGTTAG
Protein sequenceShow/hide protein sequence
MEDPKTPMKDSSSEEDAKSINIFERLKEEMEAVIHSHESPCHHKETHGTSNDIDETTPADEVKAPGVFERVKEEIEALVETIHPKKDSSNR