; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh08G007980 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G007980
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptiontranscription initiation factor TFIID subunit 9
Genome locationCma_Chr08:4818910..4821974
RNA-Seq ExpressionCmaCh08G007980
SyntenyCmaCh08G007980
Gene Ontology termsGO:0043966 - histone H3 acetylation (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0051123 - RNA polymerase II preinitiation complex assembly (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003162 - Transcription initiation factor TAFII31


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575445.1 Transcription initiation factor TFIID subunit 9, partial [Cucurbita argyrosperma subsp. sororia]9.5e-2850.32Show/hide
Query:  HFLAEARSSRVGERGSKEIIEGERDLKME------FTRSM------------------------------------QARLLCDGATLAIQSKVNFSFSRP
        +F  EAR S++G+RG KE+ EG+ DL  +        +SM                                    +A + CD   LAIQSKVNFSFS+P
Subjt:  HFLAEARSSRVGERGSKEIIEGERDLKME------FTRSM------------------------------------QARLLCDGATLAIQSKVNFSFSRP

Query:  SPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETME
         PREVLLELARNRNKIPLPRSIGGPGI LPP+QDTLL PN+QLAIP+K+ VE ME
Subjt:  SPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETME

KAG6593551.1 Transcription initiation factor TFIID subunit 9, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2984.88Show/hide
Query:  FLAEARSSRVGERGSKEIIEGERDL----KMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGP
        F  EAR SRVGERGS+EI EGE+DL    K+EFTRSMQARLLCDG TLA QSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGP
Subjt:  FLAEARSSRVGERGSKEIIEGERDL----KMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGP

KAG7025893.1 Transcription initiation factor TFIID subunit 9, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-3284.62Show/hide
Query:  SRVGERGSKEIIEGERDL----KMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLL
        S  GERGS+EI EGE+DL    K+EFTRSMQARLLCDG TLA QSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGI +PPNQDTLL
Subjt:  SRVGERGSKEIIEGERDL----KMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLL

XP_022144675.1 transcription initiation factor TFIID subunit 9 [Momordica charantia]1.7e-2949.69Show/hide
Query:  HFLAEARSSRVGERGSKEIIEGERDLKME------FTRSM------------------------------------QARLLCDGATLAIQSKVNFSFSRP
        +F  EAR S++GERGSKE+ EG+ DL  +        +SM                                    +A + CD   LAIQSKVNFSFS+P
Subjt:  HFLAEARSSRVGERGSKEIIEGERDLKME------FTRSM------------------------------------QARLLCDGATLAIQSKVNFSFSRP

Query:  SPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETMEGPPGESHL
         PREVLLELARNRNKIPLPR+IGGPGI LPP+ D L+ PN+QLAIPKKQPVETME    E ++
Subjt:  SPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETMEGPPGESHL

XP_022992393.1 transcription initiation factor TFIID subunit 9 [Cucurbita maxima]2.5e-2850.97Show/hide
Query:  HFLAEARSSRVGERGSKEIIEGERDLKME------FTRSM------------------------------------QARLLCDGATLAIQSKVNFSFSRP
        +F  EAR+S++G+RG KE+ EG+ DL  +        +SM                                    +A + CD   LAIQSKVNFSFS+P
Subjt:  HFLAEARSSRVGERGSKEIIEGERDLKME------FTRSM------------------------------------QARLLCDGATLAIQSKVNFSFSRP

Query:  SPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETME
         PREVLLELARNRNKIPLPRSIGGPGI LPP+ DTLL PN+QLAIPKK+PVE ME
Subjt:  SPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETME

TrEMBL top hitse value%identityAlignment
A0A1S3CGN5 transcription initiation factor TFIID subunit 9 isoform X21.7e-2769.47Show/hide
Query:  IIEGERDLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETME
        +++   D ++    + +A + CD   LAIQSKVNFSFS+P PREVLLELARNRNKIPLPRSIGGPGI LPP+QDTLL PN+QLAIPKKQ VETME
Subjt:  IIEGERDLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETME

A0A5A7UW56 Transcription initiation factor TFIID subunit 9 isoform X21.7e-2769.47Show/hide
Query:  IIEGERDLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETME
        +++   D ++    + +A + CD   LAIQSKVNFSFS+P PREVLLELARNRNKIPLPRSIGGPGI LPP+QDTLL PN+QLAIPKKQ VETME
Subjt:  IIEGERDLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETME

A0A6J1CSB1 transcription initiation factor TFIID subunit 98.4e-3049.69Show/hide
Query:  HFLAEARSSRVGERGSKEIIEGERDLKME------FTRSM------------------------------------QARLLCDGATLAIQSKVNFSFSRP
        +F  EAR S++GERGSKE+ EG+ DL  +        +SM                                    +A + CD   LAIQSKVNFSFS+P
Subjt:  HFLAEARSSRVGERGSKEIIEGERDLKME------FTRSM------------------------------------QARLLCDGATLAIQSKVNFSFSRP

Query:  SPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETMEGPPGESHL
         PREVLLELARNRNKIPLPR+IGGPGI LPP+ D L+ PN+QLAIPKKQPVETME    E ++
Subjt:  SPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETMEGPPGESHL

A0A6J1GPP8 transcription initiation factor TFIID subunit 94.6e-2850.32Show/hide
Query:  HFLAEARSSRVGERGSKEIIEGERDLKME------FTRSM------------------------------------QARLLCDGATLAIQSKVNFSFSRP
        +F  EAR S++G+RG KE+ EG+ DL  +        +SM                                    +A + CD   LAIQSKVNFSFS+P
Subjt:  HFLAEARSSRVGERGSKEIIEGERDLKME------FTRSM------------------------------------QARLLCDGATLAIQSKVNFSFSRP

Query:  SPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETME
         PREVLLELARNRNKIPLPRSIGGPGI LPP+QDTLL PN+QLAIP+K+ VE ME
Subjt:  SPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETME

A0A6J1JZ27 transcription initiation factor TFIID subunit 91.2e-2850.97Show/hide
Query:  HFLAEARSSRVGERGSKEIIEGERDLKME------FTRSM------------------------------------QARLLCDGATLAIQSKVNFSFSRP
        +F  EAR+S++G+RG KE+ EG+ DL  +        +SM                                    +A + CD   LAIQSKVNFSFS+P
Subjt:  HFLAEARSSRVGERGSKEIIEGERDLKME------FTRSM------------------------------------QARLLCDGATLAIQSKVNFSFSRP

Query:  SPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETME
         PREVLLELARNRNKIPLPRSIGGPGI LPP+ DTLL PN+QLAIPKK+PVE ME
Subjt:  SPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQPVETME

SwissProt top hitse value%identityAlignment
Q16594 Transcription initiation factor TFIID subunit 91.9e-0737.35Show/hide
Query:  DLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQ
        D K+  + + +A +  D   LAIQ + + SF+ P PR+ LL++AR RN+ PLP      G  LPP++  L  PN++L   +K+
Subjt:  DLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQ

Q17QQ4 Transcription initiation factor TFIID subunit 91.9e-0737.35Show/hide
Query:  DLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQ
        D K+  + + +A +  D   LAIQ + + SF+ P PR+ LL++AR RN+ PLP      G  LPP++  L  PN++L   +K+
Subjt:  DLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKKQ

Q5BKE0 Transcription initiation factor TFIID subunit 91.9e-0737.65Show/hide
Query:  DLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQL-AIPKKQP
        D K+  + + +  +  D   LAIQ + + SF+ P PR+ LL++AR RN+ PLP      G  LPP++  L  PN++L ++ KK P
Subjt:  DLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQL-AIPKKQP

Q8VI33 Transcription initiation factor TFIID subunit 95.1e-0838.82Show/hide
Query:  DLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQL-AIPKKQP
        D K+  + + +A +  D   LAIQ + + SF+ P PR+ LL++AR RN+ PLP      G  LPP++  L  PN++L ++ KK P
Subjt:  DLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQL-AIPKKQP

Q9SYH2 Transcription initiation factor TFIID subunit 93.0e-2455.05Show/hide
Query:  IIEGERDLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKK----QPVETMEG
        ++E   D ++    + +  + CD   LAIQSKVNFSFS+P PREVLLELA +RNKIPLP+SI GPG+ LPP QDTLL PN+QL IPKK    +P ET + 
Subjt:  IIEGERDLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKK----QPVETMEG

Query:  ----PPGES
             PG+S
Subjt:  ----PPGES

Arabidopsis top hitse value%identityAlignment
AT1G54140.1 TATA binding protein associated factor 21kDa subunit2.1e-2555.05Show/hide
Query:  IIEGERDLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKK----QPVETMEG
        ++E   D ++    + +  + CD   LAIQSKVNFSFS+P PREVLLELA +RNKIPLP+SI GPG+ LPP QDTLL PN+QL IPKK    +P ET + 
Subjt:  IIEGERDLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIGGPGITLPPNQDTLLGPNHQLAIPKK----QPVETMEG

Query:  ----PPGES
             PG+S
Subjt:  ----PPGES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATGTCGGGAAAGGAATTCTGTTGTTTAGATTCTAGAGAAGATGAGTCGTGGAAATGGAGGTGGATACGACAACCAAAACACCATTTTCTCGCCGAAGCTCGATC
TTCACGAGTAGGTGAAAGGGGCAGTAAGGAAATAATTGAGGGAGAGAGGGACCTAAAGATGGAGTTTACTCGGAGCATGCAGGCAAGGCTGCTGTGTGATGGTGCGACGC
TTGCTATCCAGTCAAAAGTTAATTTCAGTTTCTCACGACCTTCTCCAAGAGAGGTTCTTCTAGAGTTAGCCAGAAATAGAAACAAAATACCATTGCCAAGGTCCATTGGT
GGGCCTGGTATCACCCTTCCACCTAATCAAGACACATTGCTCGGACCCAACCATCAACTGGCAATCCCAAAGAAGCAACCAGTAGAAACCATGGAGGGGCCTCCTGGGGA
AAGTCATCTATTTCTTTGTGGCAACTATCAAGTTGTTTTGTACAGAGACCGCTATATACAGAATAATTTGATAATCATCACTAAATGTATATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAATGTCGGGAAAGGAATTCTGTTGTTTAGATTCTAGAGAAGATGAGTCGTGGAAATGGAGGTGGATACGACAACCAAAACACCATTTTCTCGCCGAAGCTCGATC
TTCACGAGTAGGTGAAAGGGGCAGTAAGGAAATAATTGAGGGAGAGAGGGACCTAAAGATGGAGTTTACTCGGAGCATGCAGGCAAGGCTGCTGTGTGATGGTGCGACGC
TTGCTATCCAGTCAAAAGTTAATTTCAGTTTCTCACGACCTTCTCCAAGAGAGGTTCTTCTAGAGTTAGCCAGAAATAGAAACAAAATACCATTGCCAAGGTCCATTGGT
GGGCCTGGTATCACCCTTCCACCTAATCAAGACACATTGCTCGGACCCAACCATCAACTGGCAATCCCAAAGAAGCAACCAGTAGAAACCATGGAGGGGCCTCCTGGGGA
AAGTCATCTATTTCTTTGTGGCAACTATCAAGTTGTTTTGTACAGAGACCGCTATATACAGAATAATTTGATAATCATCACTAAATGTATATCATAG
Protein sequenceShow/hide protein sequence
MLMSGKEFCCLDSREDESWKWRWIRQPKHHFLAEARSSRVGERGSKEIIEGERDLKMEFTRSMQARLLCDGATLAIQSKVNFSFSRPSPREVLLELARNRNKIPLPRSIG
GPGITLPPNQDTLLGPNHQLAIPKKQPVETMEGPPGESHLFLCGNYQVVLYRDRYIQNNLIIITKCIS