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CmaCh08G009080 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G009080
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionBeta-amylase
Genome locationCma_Chr08:5655677..5656471
RNA-Seq ExpressionCmaCh08G009080
SyntenyCmaCh08G009080
Gene Ontology termsGO:0000272 - polysaccharide catabolic process (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0016161 - beta-amylase activity (molecular function)
GO:0102229 - amylopectin maltohydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026001.1 hypothetical protein SDJN02_12499 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3267.54Show/hide
Query:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF---------------------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
        MFLDSSPV  CL+ GKSILKYLAFRWKGF                                 ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA
Subjt:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF---------------------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQA

Query:  HSGSGTIWNTLSGQ
        HSGSGTIWNTLSGQ
Subjt:  HSGSGTIWNTLSGQ
XP_022964580.1 beta-amylase 7-like isoform X1 [Cucurbita moschata]8.7e-2974.19Show/hide
Query:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
        MFLDSSPV  CL+ GKSILKYLAFRWKGF                    ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
Subjt:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
XP_022964581.1 beta-amylase 7-like isoform X2 [Cucurbita moschata]8.7e-2974.19Show/hide
Query:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
        MFLDSSPV  CL+ GKSILKYLAFRWKGF                    ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
Subjt:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
XP_022964582.1 beta-amylase 7-like isoform X3 [Cucurbita moschata]1.8e-2979.31Show/hide
Query:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
        MFLDSSPV  CL+ GKSILKYLAFRWKGF              ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
Subjt:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
XP_022964593.1 beta-amylase 7-like isoform X6 [Cucurbita moschata]8.7e-2974.19Show/hide
Query:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
        MFLDSSPV  CL+ GKSILKYLAFRWKGF                    ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
Subjt:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
TrEMBL top hitse value%identityAlignment
A0A6J1HI67 Beta-amylase8.5e-3079.31Show/hide
Query:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
        MFLDSSPV  CL+ GKSILKYLAFRWKGF              ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
Subjt:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
A0A6J1HI70 Beta-amylase7.7e-07100Show/hide
Query:  MKIKRDVLKCTFSCQLCREVQAHSGSGT
        MKIKRDVLKCTFSCQLCREVQAHSGSGT
Subjt:  MKIKRDVLKCTFSCQLCREVQAHSGSGT
A0A6J1HJC8 Beta-amylase4.2e-2974.19Show/hide
Query:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
        MFLDSSPV  CL+ GKSILKYLAFRWKGF                    ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
Subjt:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
A0A6J1HL80 Beta-amylase4.2e-2974.19Show/hide
Query:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
        MFLDSSPV  CL+ GKSILKYLAFRWKGF                    ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
Subjt:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
A0A6J1HLB5 Beta-amylase4.2e-2974.19Show/hide
Query:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
        MFLDSSPV  CL+ GKSILKYLAFRWKGF                    ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
Subjt:  MFLDSSPVGTCLIHGKSILKYLAFRWKGF--------------------ALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTTGACTCTTCTCCGGTCGGAACCTGCCTGATTCACGGCAAATCGATTCTGAAGTACCTTGCCTTTCGCTGGAAAGGTTTCGCTTTGGAGACATGCGTG
CCTTCTGCTGGTGCTGGTAGAGCTTGTGCGATGAAAATCAAACGTGACGTACTTAAGTGTACTTTTTCCTGCCAGCTTTGTAGAGAAGTCCAAGCGCATAGTGGC
AGTGGTACCATATGGAACACGTTATCTGGACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCTTGACTCTTCTCCGGTCGGAACCTGCCTGATTCACGGCAAATCGATTCTGAAGTACCTTGCCTTTCGCTGGAAAGGTTTCGCTTTGGAGACATGCGTG
CCTTCTGCTGGTGCTGGTAGAGCTTGTGCGATGAAAATCAAACGTGACGTACTTAAGTGTACTTTTTCCTGCCAGCTTTGTAGAGAAGTCCAAGCGCATAGTGGC
AGTGGTACCATATGGAACACGTTATCTGGACAATAA
Protein sequenceShow/hide protein sequence
MFLDSSPVGTCLIHGKSILKYLAFRWKGFALETCVPSAGAGRACAMKIKRDVLKCTFSCQLCREVQAHSGSGTIWNTLSGQ