; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh08G009860 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G009860
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionupstream activation factor subunit spp27-like
Genome locationCma_Chr08:6162668..6164782
RNA-Seq ExpressionCmaCh08G009860
SyntenyCmaCh08G009860
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593744.1 hypothetical protein SDJN03_13220, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6895.92Show/hide
Query:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
        MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGE+KASGAAA+RKKSEAGEKKEGNRSGGI KSVQVSPALAGFLGMSESSR+EAVKQIWSYIK
Subjt:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK

Query:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS
        LN+LQNPANKRQINCDEKLKAIFDGRENVG LEIGKLLSPHFVKSSS
Subjt:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS

KAG6593745.1 hypothetical protein SDJN03_13221, partial [Cucurbita argyrosperma subsp. sororia]4.1e-6997.28Show/hide
Query:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
        MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAA+RKKSEAGEKKEGNRSGGI KSVQVSPALAGFLGMSESSR EAVKQIWSYIK
Subjt:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK

Query:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS
        LN+LQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS
Subjt:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS

XP_023000110.1 upstream activation factor subunit spp27-like [Cucurbita maxima]5.7e-7199.32Show/hide
Query:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
        MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAA+RKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
Subjt:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK

Query:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS
        LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS
Subjt:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS

XP_023000111.1 upstream activation factor subunit spp27-like [Cucurbita maxima]2.0e-71100Show/hide
Query:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
        MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
Subjt:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK

Query:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS
        LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS
Subjt:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS

XP_023514456.1 upstream activation factor subunit UAF30-like [Cucurbita pepo subsp. pepo]8.6e-6795.24Show/hide
Query:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
        MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKG+LKASGAAA+RK SEAGEKKE NRSGGIFKSVQVSPALAGFLGMSESSR EAVKQIWSYIK
Subjt:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK

Query:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS
        LN+LQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLS HFVKSSS
Subjt:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS

TrEMBL top hitse value%identityAlignment
A0A0A0KCY9 SWIB domain-containing protein8.4e-4469.66Show/hide
Query:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
        MASGL+NGTR F+GCRTLLDSLKSTTQAYSS   VS K  LK S AA + +KS+   KK  N SGG+ K+ +VSP LAGFLG SE +R+EAVKQIW YIK
Subjt:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK

Query:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKS
        LN+LQNP +KRQI CD KLKAIF GRE VG+LEI K LS HFVKS
Subjt:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKS

A0A1S3CBA0 protein TRI1-like3.7e-4771.03Show/hide
Query:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
        MASGL+NGTR FRGC+TLLDSLK TTQAYSS  AVS K +LK   AA + +KS+A  K++ N SGGI KS++VSP LAGFLG SE SR++A+KQIWSYIK
Subjt:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK

Query:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKS
        LN+LQN  +KRQINCD KLKAIF GRE VG+LEI K LSPHFVKS
Subjt:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKS

A0A5D3DMJ2 Protein TRI1-like3.7e-4771.03Show/hide
Query:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
        MASGL+NGTR FRGC+TLLDSLK TTQAYSS  AVS K +LK   AA + +KS+A  K++ N SGGI KS++VSP LAGFLG SE SR++A+KQIWSYIK
Subjt:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK

Query:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKS
        LN+LQN  +KRQINCD KLKAIF GRE VG+LEI K LSPHFVKS
Subjt:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKS

A0A6J1KEZ2 upstream activation factor subunit spp27-like9.5e-72100Show/hide
Query:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
        MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
Subjt:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK

Query:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS
        LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS
Subjt:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS

A0A6J1KHF5 upstream activation factor subunit spp27-like2.8e-7199.32Show/hide
Query:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
        MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAA+RKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK
Subjt:  MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIK

Query:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS
        LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS
Subjt:  LNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp271.8e-1144.71Show/hide
Query:  AAATRKKSEAGE---KKEGNR---SGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFD
        A  TRK+ E GE   K++ N+   +  + K +++SP LA FLG+ + SR + VK++W YIK +DLQ+P +KR I CD+KLK++F+
Subjt:  AAATRKKSEAGE---KKEGNR---SGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFD

Q05024 Protein TRI16.5e-0935Show/hide
Query:  KASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPH
        K  G + ++ K +  +    + +    + V +S  L  FLG  E  R++ VK IW YIK +DLQNP ++R+I CDEK++ IF   + + +  + KLL+ H
Subjt:  KASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPH

Q08747 Upstream activation factor subunit UAF302.9e-0932.85Show/hide
Query:  RTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAG------EKKEG--NRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNP
        R+L D LK      ++  A+    E+  S  ++  +K+++       EKK+G  ++S    + V +S +LA  LG  E +R+E V+++W+YIK ++LQNP
Subjt:  RTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAG------EKKEG--NRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNP

Query:  ANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVK
         NK++I CDEKL+ I    ++  + E+ K+L+ H  +
Subjt:  ANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVK

Q6P9Z1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 32.2e-0441.51Show/hide
Query:  QVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFD
        ++ P LA  LG+   SRS  V+ +W Y+K N LQ+  +K  IN D+  + IFD
Subjt:  QVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFD

Q6STE5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 32.2e-0441.51Show/hide
Query:  QVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFD
        ++ P LA  LG+   SRS  V+ +W Y+K N LQ+  +K  IN D+  + IFD
Subjt:  QVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFD

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein3.6e-2354.9Show/hide
Query:  SGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFV
        S AA     + AGE K      GIFK+  VS  LA F G  E +R  A+K++W Y+KL++LQNPANK++I+CD+KLK IFDG++ VGI EI KLLSPHF 
Subjt:  SGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFV

Query:  KS
        KS
Subjt:  KS

AT2G14880.1 SWIB/MDM2 domain superfamily protein1.6e-1840.74Show/hide
Query:  TRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPA
        T  FR   T L SL+          A  P  +L+   A  +  +S            GI K   VSP +   + + E +R++A+K+IW+YIK +DLQ+P 
Subjt:  TRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPA

Query:  NKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFV
        NKR+I CDEKLK IF+GR+ VG LEI KL+ PHF+
Subjt:  NKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFV

AT2G35605.1 SWIB/MDM2 domain superfamily protein7.3e-2457.29Show/hide
Query:  KKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSS
        K + +   K G +  GI K V VS  LA F+G +E SR+ AVK+IW YIKLN+LQNP NKR+I CDE+LK IF G++ VG LEI KLLS HF KS+
Subjt:  KKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSS

AT3G03590.1 SWIB/MDM2 domain superfamily protein5.8e-2951.09Show/hide
Query:  LFRGCRTLL-DSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPAN
        +FRG R+LL  + ++T+   S+ +   P  + KA      + KS++  KK   RS GIFK   VSP LA FLG  E+SR++A+K IW+YIK +DLQNPA+
Subjt:  LFRGCRTLL-DSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPAN

Query:  KRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSS
        KR+I CDE LK IF+G++ VG LEI KLLSPHFVK++
Subjt:  KRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSS

AT4G34290.1 SWIB/MDM2 domain superfamily protein5.4e-1949Show/hide
Query:  SGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFV
        S AAA+   +   + +E     GI K   VS A+   +G+ E  R++A+K+IW+YIK +DLQ+P NKR I CDEKLK IF+G+E VG LEI KL+ PHF+
Subjt:  SGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQNPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAGGTCTGAACAATGGCACTAGGTTATTCAGAGGTTGCAGAACCCTCTTAGATTCACTCAAGTCCACCACTCAAGCTTACTCTTCTGCTGCTGCGGTT
TCTCCCAAGGGGGAGCTAAAAGCTTCAGGTGCCGCTGCTACCCGCAAAAAATCGGAAGCCGGAGAGAAGAAAGAGGGGAATCGTTCGGGGGGGATTTTTAAGTCC
GTCCAGGTTTCTCCGGCTCTCGCTGGCTTCCTCGGCATGTCCGAGTCTTCGCGTTCTGAAGCCGTCAAGCAAATATGGTCCTACATCAAGCTGAATGATCTCCAG
AACCCAGCTAATAAGAGGCAGATCAATTGTGATGAAAAGCTAAAGGCCATATTTGATGGAAGAGAGAATGTGGGGATCTTAGAGATCGGAAAATTGCTATCCCCT
CATTTTGTGAAGTCGTCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCAGGTCTGAACAATGGCACTAGGTTATTCAGAGGTTGCAGAACCCTCTTAGATTCACTCAAGTCCACCACTCAAGCTTACTCTTCTGCTGCTGCGGTT
TCTCCCAAGGGGGAGCTAAAAGCTTCAGGTGCCGCTGCTACCCGCAAAAAATCGGAAGCCGGAGAGAAGAAAGAGGGGAATCGTTCGGGGGGGATTTTTAAGTCC
GTCCAGGTTTCTCCGGCTCTCGCTGGCTTCCTCGGCATGTCCGAGTCTTCGCGTTCTGAAGCCGTCAAGCAAATATGGTCCTACATCAAGCTGAATGATCTCCAG
AACCCAGCTAATAAGAGGCAGATCAATTGTGATGAAAAGCTAAAGGCCATATTTGATGGAAGAGAGAATGTGGGGATCTTAGAGATCGGAAAATTGCTATCCCCT
CATTTTGTGAAGTCGTCTAGTTAACCATCAAACTTCCAATGCATGTATCGACTTAGTTGTTCTAACAGTTATCTCTCAACCTATCTTCCAAATCGCTGAGATGAT
ATTGTGCTGTGTTTGGCTAATCTTATGTACTCCTTGGTTTGTCTCTGCTTTAAGAAAAAGAGGTATTTCATGCCCCGACCTTGTTGTTCATT
Protein sequenceShow/hide protein sequence
MASGLNNGTRLFRGCRTLLDSLKSTTQAYSSAAAVSPKGELKASGAAATRKKSEAGEKKEGNRSGGIFKSVQVSPALAGFLGMSESSRSEAVKQIWSYIKLNDLQ
NPANKRQINCDEKLKAIFDGRENVGILEIGKLLSPHFVKSSS