CuGenDBv2

Gene ID	CmaCh08G010180
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Cytochrome c oxidase subunit 2
Genome location	Cma_Chr08:6380232..6381254
RNA-Seq Expression	CmaCh08G010180
Synteny	CmaCh08G010180
Gene Ontology terms	GO:0022900 - electron transport chain (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0070469 - respirasome (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0005507 - copper ion binding (molecular function)
InterPro domains	IPR002429 - Cytochrome c oxidase subunit II-like C-terminal IPR008972 - Cupredoxin IPR011759 - Cytochrome C oxidase subunit II, transmembrane domain

Homology

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GenBank top hits

e value

%identity

Alignment

AEN56105.1 cytochrome c oxidase subunit 2 [Cucumis melo subsp. melo]

2.3e-56

89.31

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISILVQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

KAA0033570.1 cytochrome c oxidase subunit 2 [Cucumis melo var. makuwa]

2.3e-56

89.31

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISILVQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

KAE8648249.1 hypothetical protein Csa_018529 [Cucumis sativus]

2.3e-56

89.31

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISILVQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

YP_004849352.1 cytochrome c oxidase subunit 2 [Cucumis sativus]

2.3e-56

89.31

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISILVQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

YP_009913658.1 cytochrome c oxidase subunit 2 [Luffa acutangula]

2.3e-56

89.31

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISILVQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

TrEMBL top hits

e value

%identity

Alignment

A0A3S9JIH4 Cytochrome c oxidase subunit 2

1.1e-56

89.31

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISILVQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

A0A5A7SRN3 Cytochrome-c oxidase

1.1e-56

89.31

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISILVQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

A0A7D6C0E1 Cytochrome c oxidase subunit 2

1.1e-56

89.31

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISILVQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

G3EJ04 Cytochrome c oxidase subunit 2

1.1e-56

89.31

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISILVQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

G3EU21 Cytochrome c oxidase subunit 2

1.1e-56

89.31

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISILVQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

SwissProt top hits

e value

%identity

Alignment

P05491 Cytochrome c oxidase subunit 2

9.7e-58

87.02

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAKTHLRIIVTPADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISI VQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

P08744 Cytochrome c oxidase subunit 2

3.1e-56

85.5

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMD V+VDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDDLELGQS LLEVDNRVV+PAKTHLRIIVTPADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISI VQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

P27168 Cytochrome c oxidase subunit 2

1.8e-56

86.26

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD ELGQSRLLEVDNRVV+PAKTHLRIIVT ADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISI VQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

P93285 Cytochrome c oxidase subunit 2

1.5e-53

83.21

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPA+TIKAIGHQWY TYEYSDYN SDEQSLTFDSY IPE+DLELGQ RLLEVDNRVV+PAKTHLRIIVT ADV HS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISILVQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

P98012 Cytochrome c oxidase subunit 2

2.9e-54

83.21

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Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPA+TIKAIGHQWYR+YEYSDYN SDEQSLTFDSYTIPEDD ELGQSRLLEVDNRVV+PAKTH+RIIVT ADV HS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQ SILVQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

Arabidopsis top hits

e value

%identity

Alignment

ATMG00160.1 cytochrome oxidase 2

1.7e-57

85.5

Show/hide

Query:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----
        MFIAIPSF LLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYN SDEQSLTFDSY IPE+DLELGQSRLLEVDNRVV+PAKTHLRIIVT ADVPHS     
Subjt:  MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-----

Query:  --VKCDVVPGRLNQISILVQREGVYYAKFEE
          VKCD VPGRLNQISILVQREGVYY +  E
Subjt:  --VKCDVVPGRLNQISILVQREGVYYAKFEE

Sequences

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CDS sequence

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ATGTTCATTGCTATACCATCCTTTACTCTCTTATACTCAATGGACGAGGTAGTAGTAGATCCAGCCATGACTATCAAAGCTATTGGACATCAATGGTATCGAACTTATGA
GTATTCTGACTATAACCGTTCCGATGAACAGTCACTCACTTTTGACAGTTATACGATTCCAGAAGATGATTTAGAATTGGGTCAATCACGTTTATTAGAAGTGGACAATA
GAGTGGTTCTACCAGCCAAAACTCATCTACGTATTATTGTAACACCTGCTGATGTACCTCATAGTGTCAAATGTGATGTTGTACCTGGTCGTTTAAATCAAATCTCCATC
TTGGTACAACGAGAAGGAGTTTACTATGCAAAATTTGAAGAGCAAGACAACACCCAAGGGTTTTATGAAACACGAGTCTTGAGATTCAATAATCTACCGTTTCTATGA

mRNA sequence

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Protein sequence

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MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSVKCDVVPGRLNQISI
LVQREGVYYAKFEEQDNTQGFYETRVLRFNNLPFL

CmaCh08G010180 (gene) of Cucurbita maxima (Rimu) v1.1 genome