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CmaCh08G010300 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G010300
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCLAVATA3/ESR-related protein
Genome locationCma_Chr08:6441742..6442499
RNA-Seq ExpressionCmaCh08G010300
SyntenyCmaCh08G010300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574868.1 CLAVATA3/ESR (CLE)-related protein TDIF, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1868.04Show/hide
Query:  MASLKEHYVSTSL-TSTKSRACFFLFLL-LLLVVVPYNFSTSPSS-TSVSTPSRPPSSSLAMEEQAFSSPYTSKRTLQQFEAAMHEVPSGPNPTTNK
        MA  +++Y STSL TSTKS+ACFFLFLL LLL+ VPY FSTSPSS  S S PSRPPSS  AM EQAF  P        QFEA+MHEVPSGPNPT+NK
Subjt:  MASLKEHYVSTSL-TSTKSRACFFLFLL-LLLVVVPYNFSTSPSS-TSVSTPSRPPSSSLAMEEQAFSSPYTSKRTLQQFEAAMHEVPSGPNPTTNK
KAG6593788.1 hypothetical protein SDJN03_13264, partial [Cucurbita argyrosperma subsp. sororia]5.3e-3488.3Show/hide
Query:  MASLKEHYVSTSLTSTKSRACFFLFLLLLLVVVPYNFSTSPSSTSVSTPSRPPSSSLAMEEQAFSSPYTSKRTLQQFEAAMHEVPSGPNPTTNK
        MA LKEHY STSLTSTKSRACFFLFLLLL    PYNFST PSS S STPSRPPSSSLAMEEQAFSSPY+S+RTLQQFEAAMHEVPSGPNPTTNK
Subjt:  MASLKEHYVSTSLTSTKSRACFFLFLLLLLVVVPYNFSTSPSSTSVSTPSRPPSSSLAMEEQAFSSPYTSKRTLQQFEAAMHEVPSGPNPTTNK
KGN61461.1 hypothetical protein Csa_006135 [Cucumis sativus]1.0e-0856.96Show/hide
Query:  KSRACFFLFLL-LLLVVVPYNFSTSPSSTSVSTPSRPPSSSLAMEEQAFSSPYTSKRTLQQFEAAMHEVPSGPNPTTNK
        KS+ACFFLFLL LLL+VVP+  ST P     +TPSRPPS+ +AM                 FEAAMHEVPSGPNPT+NK
Subjt:  KSRACFFLFLL-LLLVVVPYNFSTSPSSTSVSTPSRPPSSSLAMEEQAFSSPYTSKRTLQQFEAAMHEVPSGPNPTTNK
TrEMBL top hitse value%identityAlignment
A0A0A0LNB8 CLAVATA3/ESR-related protein4.9e-0956.96Show/hide
Query:  KSRACFFLFLL-LLLVVVPYNFSTSPSSTSVSTPSRPPSSSLAMEEQAFSSPYTSKRTLQQFEAAMHEVPSGPNPTTNK
        KS+ACFFLFLL LLL+VVP+  ST P     +TPSRPPS+ +AM                 FEAAMHEVPSGPNPT+NK
Subjt:  KSRACFFLFLL-LLLVVVPYNFSTSPSSTSVSTPSRPPSSSLAMEEQAFSSPYTSKRTLQQFEAAMHEVPSGPNPTTNK
SwissProt top hitse value%identityAlignment
A1EC31 CLAVATA3/ESR (CLE)-related protein TDIF3.5e-0433.33Show/hide
Query:  MASLKEHYVSTSLTSTKSRACFFLFLLLLLVVVPYNFSTSPSSTSVSTPSRPPSSSLAMEEQAFSSPYTS------KRTLQQ--------FEAAMHEVPS
        MA L+     +  T+ +S +  F   LL++ ++     +S S    S P+  P+SS + +E + SS  T+      KRT  Q        FEA  HEVPS
Subjt:  MASLKEHYVSTSLTSTKSRACFFLFLLLLLVVVPYNFSTSPSSTSVSTPSRPPSSSLAMEEQAFSSPYTS------KRTLQQ--------FEAAMHEVPS

Query:  GPNPTTNK
        GPNP +N+
Subjt:  GPNPTTNK
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAACAAAGTGGGCGTCGTCGTTATCGATCATCATTATCCTCATCGTCATCATCACCTTTTTTCCGCTCCCTTTTCATGGCAAGTCTTAAAGAGCATTAT
GTCTCCACAAGTTTAACCTCAACGAAGTCTCGAGCTTGCTTCTTCCTCTTTCTCCTCCTCCTTCTCGTTGTTGTTCCTTACAACTTCTCGACCAGTCCGAGCTCG
ACATCTGTGAGTACTCCATCTCGTCCTCCTTCATCTTCTTTGGCCATGGAAGAACAAGCCTTCTCTAGCCCTTATACGAGTAAGAGGACATTACAACAATTTGAA
GCAGCTATGCATGAAGTCCCTAGTGGCCCAAATCCCACAACCAACAAAACTTTTTTACTTATTTACATAGATCTGTTACCGGAGTACATATTTATATTCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAACAAAGTGGGCGTCGTCGTTATCGATCATCATTATCCTCATCGTCATCATCACCTTTTTTCCGCTCCCTTTTCATGGCAAGTCTTAAAGAGCATTAT
GTCTCCACAAGTTTAACCTCAACGAAGTCTCGAGCTTGCTTCTTCCTCTTTCTCCTCCTCCTTCTCGTTGTTGTTCCTTACAACTTCTCGACCAGTCCGAGCTCG
ACATCTGTGAGTACTCCATCTCGTCCTCCTTCATCTTCTTTGGCCATGGAAGAACAAGCCTTCTCTAGCCCTTATACGAGTAAGAGGACATTACAACAATTTGAA
GCAGCTATGCATGAAGTCCCTAGTGGCCCAAATCCCACAACCAACAAAACTTTTTTACTTATTTACATAGATCTGTTACCGGAGTACATATTTATATTCTATTAA
Protein sequenceShow/hide protein sequence
MPKQSGRRRYRSSLSSSSSSPFFRSLFMASLKEHYVSTSLTSTKSRACFFLFLLLLLVVVPYNFSTSPSSTSVSTPSRPPSSSLAMEEQAFSSPYTSKRTLQQFE
AAMHEVPSGPNPTTNKTFLLIYIDLLPEYIFIFY