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CmaCh08G010730 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G010730
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionglycine-rich cell wall structural protein-like
Genome locationCma_Chr08:6687593..6688228
RNA-Seq ExpressionCmaCh08G010730
SyntenyCmaCh08G010730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593828.1 hypothetical protein SDJN03_13304, partial [Cucurbita argyrosperma subsp. sororia]9.3e-2475.88Show/hide
Query:  VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGGLGGGSGGGGGLGGGSGGGFGGG
        VLARGVAK RNEEEEKFLF+GKGGGLGGGYGGGSG GGGGAGGGSGFGGGGAGGGSGF                               GGGSGG FGGG
Subjt:  VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGGLGGGSGGGGGLGGGSGGGFGGG

Query:  HGIGGGVGGGGGDGDGDGDGGLGGGDGGGFGNGGGYGGGFG-GGGLGGGGGFGKGGGFGGGIGK-GGGLGGD--------GGGGGGSGGGFGGGGNGHH
        HGIGGGVGGGG  GDGDGDGGLGGGDGGGFGNGGGYGGGFG GGGLGGGGGFGKGGG+GGGIGK GGGLGGD        GGGGGGSGGGFGGGGNGHH
Subjt:  HGIGGGVGGGGGDGDGDGDGGLGGGDGGGFGNGGGYGGGFG-GGGLGGGGGFGKGGGFGGGIGK-GGGLGGD--------GGGGGGSGGGFGGGGNGHH

XP_022964362.1 glycine-rich cell wall structural protein [Cucurbita moschata]9.6e-2976.02Show/hide
Query:  MDSGWNRAAF------------VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGG
        M SGWNR A             VLARGVAK RNEEEEKFLF+GKGGGLGGGYGGGSG GGGGAGGGSGFGGGGAGGGSGFG                   
Subjt:  MDSGWNRAAF------------VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGG

Query:  LGGGSGGGGGLGGGSGGGFGGGHGIGGGVGGGGGD----GDGDGDGGLGGGDGGGFGNGGGYGGGFG-GGGLGGGGGFGKGGGFGGGIGK-GGGLGGD--
         GG  GGGGG+GGGSGGGFGGGHGIGGGVGGGGGD    GDGDGDGGLGGGDGGGFGNGGGYGGGFG GGGLGGGGGFGKGGG+GGG+GK GGGLGGD  
Subjt:  LGGGSGGGGGLGGGSGGGFGGGHGIGGGVGGGGGD----GDGDGDGGLGGGDGGGFGNGGGYGGGFG-GGGLGGGGGFGKGGGFGGGIGK-GGGLGGD--

Query:  --GGGGGGSGGGFGGGGNGHH
          GGGGGGSGGGFGGGGNGHH
Subjt:  --GGGGGGSGGGFGGGGNGHH

XP_023000548.1 glycine-rich cell wall structural protein-like [Cucurbita maxima]2.7e-4793.84Show/hide
Query:  MDSGWNRAAF------------VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGG
        MDSGWNRAA             VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGG
Subjt:  MDSGWNRAAF------------VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGG

Query:  LGGGSGGGGGLGGGSGGGFGGGHGIGGGVGGGGGDGDGDGDGGLGGGDGGGFGNGGGYGGGFGGGGLGGGGGFGKGGGFGGGIGKGGGLGGDGGGGGGSG
        LGGGSGGGGGLGGGSGGGFGGGHGIGGGVGGGGGDGDGDGDGGLGGGDGGGFGNGGGYGGGFGGGGLGGGGGFGKGGGFGGGIGKGGGLGGDGGGGGGSG
Subjt:  LGGGSGGGGGLGGGSGGGFGGGHGIGGGVGGGGGDGDGDGDGGLGGGDGGGFGNGGGYGGGFGGGGLGGGGGFGKGGGFGGGIGKGGGLGGDGGGGGGSG

Query:  GGFGGGGNGHH
        GGFGGGGNGHH
Subjt:  GGFGGGGNGHH

XP_023514452.1 glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo]2.7e-3178.04Show/hide
Query:  MDSGWNRAAF------------VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGG
        M SGWNR A             VLARGVAK RNEEEEKFLF+GKGGGLGGGYGGGSG GGGGA                      G GSGFGGGSGGGGG
Subjt:  MDSGWNRAAF------------VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGG

Query:  LGGGSGGGGGLGGGSGGGFGGGHGIGGGVGGGGGDGDGDGDGGLGGGDGGGFGNGGGYGGGFG-GGGLGGGGGFGKGGGFGGGIGKGGGLGGD--GGGGG
        LGGGSGGGGG+GGGSGGGFGGGHGIGGGVGGGGGDGDGDGDGGLGGGDGGGFGNGGGYGGGFG GGGLGGGGGFGKGGG+GGGIGKGGGLGGD  GGGGG
Subjt:  LGGGSGGGGGLGGGSGGGFGGGHGIGGGVGGGGGDGDGDGDGGLGGGDGGGFGNGGGYGGGFG-GGGLGGGGGFGKGGGFGGGIGKGGGLGGD--GGGGG

Query:  GSGGGFGGGGNGHH
        GSGGGF GGGNGHH
Subjt:  GSGGGFGGGGNGHH

TrEMBL top hitse value%identityAlignment
A0A6J1HHL8 glycine-rich cell wall structural protein4.6e-2976.02Show/hide
Query:  MDSGWNRAAF------------VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGG
        M SGWNR A             VLARGVAK RNEEEEKFLF+GKGGGLGGGYGGGSG GGGGAGGGSGFGGGGAGGGSGFG                   
Subjt:  MDSGWNRAAF------------VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGG

Query:  LGGGSGGGGGLGGGSGGGFGGGHGIGGGVGGGGGD----GDGDGDGGLGGGDGGGFGNGGGYGGGFG-GGGLGGGGGFGKGGGFGGGIGK-GGGLGGD--
         GG  GGGGG+GGGSGGGFGGGHGIGGGVGGGGGD    GDGDGDGGLGGGDGGGFGNGGGYGGGFG GGGLGGGGGFGKGGG+GGG+GK GGGLGGD  
Subjt:  LGGGSGGGGGLGGGSGGGFGGGHGIGGGVGGGGGD----GDGDGDGGLGGGDGGGFGNGGGYGGGFG-GGGLGGGGGFGKGGGFGGGIGK-GGGLGGD--

Query:  --GGGGGGSGGGFGGGGNGHH
          GGGGGGSGGGFGGGGNGHH
Subjt:  --GGGGGGSGGGFGGGGNGHH

A0A6J1KMY0 glycine-rich cell wall structural protein-like1.3e-4793.84Show/hide
Query:  MDSGWNRAAF------------VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGG
        MDSGWNRAA             VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGG
Subjt:  MDSGWNRAAF------------VLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGG

Query:  LGGGSGGGGGLGGGSGGGFGGGHGIGGGVGGGGGDGDGDGDGGLGGGDGGGFGNGGGYGGGFGGGGLGGGGGFGKGGGFGGGIGKGGGLGGDGGGGGGSG
        LGGGSGGGGGLGGGSGGGFGGGHGIGGGVGGGGGDGDGDGDGGLGGGDGGGFGNGGGYGGGFGGGGLGGGGGFGKGGGFGGGIGKGGGLGGDGGGGGGSG
Subjt:  LGGGSGGGGGLGGGSGGGFGGGHGIGGGVGGGGGDGDGDGDGGLGGGDGGGFGNGGGYGGGFGGGGLGGGGGFGKGGGFGGGIGKGGGLGGDGGGGGGSG

Query:  GGFGGGGNGHH
        GGFGGGGNGHH
Subjt:  GGFGGGGNGHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGTGGCTGGAACAGAGCGGCTTTTGTGCTTGCTAGGGGAGTGGCTAAAGCGAGGAATGAGGAGGAGGAGAAGTTTCTGTTCTATGGCAAGGGTGGTGGA
CTAGGAGGTGGATATGGTGGTGGCAGTGGTTCTGGAGGAGGAGGAGCTGGTGGTGGCAGTGGTTTTGGAGGTGGAGGAGCTGGTGGTGGCAGTGGTTTTGGAGGT
GGAGGAACTGGTGGTGGCAGTGGTTTTGGAGGTGGAAGTGGTGGCGGCGGTGGTCTTGGAGGTGGAAGTGGTGGCGGCGGTGGTCTTGGAGGTGGAAGTGGAGGA
GGCTTTGGAGGGGGTCATGGGATTGGTGGTGGTGTAGGAGGTGGAGGTGGAGATGGAGATGGAGATGGAGATGGAGGCCTTGGAGGTGGTGATGGTGGCGGGTTT
GGTAATGGTGGTGGTTATGGCGGAGGATTTGGGGGTGGAGGTCTTGGAGGTGGAGGAGGGTTCGGTAAGGGTGGTGGATTCGGTGGTGGCATTGGAAAGGGTGGA
GGACTTGGTGGTGATGGTGGAGGTGGAGGTGGCTCGGGTGGTGGGTTTGGCGGCGGCGGAAATGGACACCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGTGGCTGGAACAGAGCGGCTTTTGTGCTTGCTAGGGGAGTGGCTAAAGCGAGGAATGAGGAGGAGGAGAAGTTTCTGTTCTATGGCAAGGGTGGTGGA
CTAGGAGGTGGATATGGTGGTGGCAGTGGTTCTGGAGGAGGAGGAGCTGGTGGTGGCAGTGGTTTTGGAGGTGGAGGAGCTGGTGGTGGCAGTGGTTTTGGAGGT
GGAGGAACTGGTGGTGGCAGTGGTTTTGGAGGTGGAAGTGGTGGCGGCGGTGGTCTTGGAGGTGGAAGTGGTGGCGGCGGTGGTCTTGGAGGTGGAAGTGGAGGA
GGCTTTGGAGGGGGTCATGGGATTGGTGGTGGTGTAGGAGGTGGAGGTGGAGATGGAGATGGAGATGGAGATGGAGGCCTTGGAGGTGGTGATGGTGGCGGGTTT
GGTAATGGTGGTGGTTATGGCGGAGGATTTGGGGGTGGAGGTCTTGGAGGTGGAGGAGGGTTCGGTAAGGGTGGTGGATTCGGTGGTGGCATTGGAAAGGGTGGA
GGACTTGGTGGTGATGGTGGAGGTGGAGGTGGCTCGGGTGGTGGGTTTGGCGGCGGCGGAAATGGACACCACTAA
Protein sequenceShow/hide protein sequence
MDSGWNRAAFVLARGVAKARNEEEEKFLFYGKGGGLGGGYGGGSGSGGGGAGGGSGFGGGGAGGGSGFGGGGTGGGSGFGGGSGGGGGLGGGSGGGGGLGGGSGG
GFGGGHGIGGGVGGGGGDGDGDGDGGLGGGDGGGFGNGGGYGGGFGGGGLGGGGGFGKGGGFGGGIGKGGGLGGDGGGGGGSGGGFGGGGNGHH