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CmaCh08G011920 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G011920
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionLow-density receptor-like protein
Genome locationCma_Chr08:7330478..7335682
RNA-Seq ExpressionCmaCh08G011920
SyntenyCmaCh08G011920
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023000086.1 uncharacterized protein LOC111494388 isoform X2 [Cucurbita maxima]2.5e-4288.29Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEIK
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ       
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEIK

Query:  RPSLIKVEGLE
           LIK +G E
Subjt:  RPSLIKVEGLE
XP_023000087.1 uncharacterized protein LOC111494388 isoform X3 [Cucurbita maxima]1.9e-4291.51Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEI-
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ +   + 
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEI-

Query:  KRPSLI
        +RP LI
Subjt:  KRPSLI
XP_023000088.1 uncharacterized protein LOC111494388 isoform X4 [Cucurbita maxima]8.7e-4398.95Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFR
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQF+
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFR
XP_023514360.1 uncharacterized protein LOC111778653 isoform X1 [Cucurbita pepo subsp. pepo]4.3e-4294.9Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVE
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ   ++
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVE
XP_023514362.1 uncharacterized protein LOC111778653 isoform X3 [Cucurbita pepo subsp. pepo]3.3e-4297.89Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFR
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ +
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFR
TrEMBL top hitse value%identityAlignment
A0A6J1KCK7 uncharacterized protein LOC111494388 isoform X39.3e-4391.51Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEI-
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ +   + 
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEI-

Query:  KRPSLI
        +RP LI
Subjt:  KRPSLI
A0A6J1KEW6 uncharacterized protein LOC111494388 isoform X21.2e-4288.29Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEIK
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ       
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEIK

Query:  RPSLIKVEGLE
           LIK +G E
Subjt:  RPSLIKVEGLE
A0A6J1KHD0 uncharacterized protein LOC111494388 isoform X12.1e-4296.97Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEI
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ   VEI
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEI
A0A6J1KIX7 uncharacterized protein LOC111494388 isoform X53.6e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ
A0A6J1KLL4 uncharacterized protein LOC111494388 isoform X44.2e-4398.95Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFR
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQF+
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18850.1 unknown protein1.4e-2765.56Show/hide
Query:  ASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLL
        +S   RI FR V+++ L++V+FYVGRPLYWKISAT+HDIR NKQ+V+EG SQIV EAQ+SVGWYHDESDSG  +G   KK+G   +RRLL
Subjt:  ASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGTCGGCCGCTAGGATTACGTTTCGCGTTGTCATGGTGGTAGTCCTCCTCCTCGTCATTTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCCACTGT
CCATGACATTCGCCGGAACAAACAGACCGTTAAAGAAGGTTTCTCTCAAATCGTTCTTGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCGGGCGTCC
ATGATGGAGCTGATGGAAAGAAGGCTGGATCGGTTGCTGCTCGGAGGCTGCTTCATCAGTTTAGAACAGTAGAGATTAAGCGTCCCAGTCTAATAAAAGTTGAAGGACTA
GAATTAGATTGA
mRNA sequenceShow/hide mRNA sequence
GATCGAACCATGTCAACTGCATAGCGGGAATCTCTAAGCTCTGGTAGATCACAGTTTTTCTCGCTCTCTCTCTCTCTTTCTCTCTGTTTCTTTCTGCAAGACAAAGCCAC
CGGAAGCAATGGCGTCGTCGGCCGCTAGGATTACGTTTCGCGTTGTCATGGTGGTAGTCCTCCTCCTCGTCATTTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCC
GCCACTGTCCATGACATTCGCCGGAACAAACAGACCGTTAAAGAAGGTTTCTCTCAAATCGTTCTTGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTC
GGGCGTCCATGATGGAGCTGATGGAAAGAAGGCTGGATCGGTTGCTGCTCGGAGGCTGCTTCATCAGTTTAGAACAGTAGAGATTAAGCGTCCCAGTCTAATAAAAGTTG
AAGGACTAGAATTAGATTGA
Protein sequenceShow/hide protein sequence
MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEIKRPSLIKVEGL
ELD