; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh08G012200 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G012200
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionDynein beta chain, ciliary protein
Genome locationCma_Chr08:7486673..7489504
RNA-Seq ExpressionCmaCh08G012200
SyntenyCmaCh08G012200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026303.1 hypothetical protein SDJN02_12804 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-7071.57Show/hide
Query:  MESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSREVILEMCLRNEIYGLMPCLAIWWVEIR
        MESVVDWKPPPRAAEKARESGAHDS                                                 VILEMCLRNEIYGLMPCLAIW VE R
Subjt:  MESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSREVILEMCLRNEIYGLMPCLAIWWVEIR

Query:  SKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSL
        SKPGSKLE+REGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVA+MRHIILLNEGKADDFEGPICVHQIAER N VSVHQIQTILQF+SLPPEDSL
Subjt:  SKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPEDSL

Query:  REKK
         E+K
Subjt:  REKK

XP_022958820.1 uncharacterized protein LOC111459975 [Cucurbita moschata]9.1e-5560.17Show/hide
Query:  MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSRE
        MGQAFRRAA RIKPA S+DS+ASSLKMESVVD KPPPRAAEKARESGA DS        G++  L S S+N L                         R+
Subjt:  MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSRE

Query:  VILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQIA
           +  L +++ G           IRSKPG KLE+ E SVVERYDRPMP+  NTDLKSSKYEDR APPGTLNVAQMRHI+LL+EGKA+D +GP+ V+QIA
Subjt:  VILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQIA

Query:  ERCNSVSVHQIQTILQFLSLPPEDSLREKKK
        ER N V V QI+TILQFLSLPPEDSLR+KKK
Subjt:  ERCNSVSVHQIQTILQFLSLPPEDSLREKKK

XP_023000204.1 uncharacterized protein LOC111494494 [Cucurbita maxima]7.4e-73100Show/hide
Query:  VVSREVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPIC
        VVSREVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPIC
Subjt:  VVSREVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPIC

Query:  VHQIAERCNSVSVHQIQTILQFLSLPPEDSLREKKKDP
        VHQIAERCNSVSVHQIQTILQFLSLPPEDSLREKKKDP
Subjt:  VHQIAERCNSVSVHQIQTILQFLSLPPEDSLREKKKDP

XP_023006464.1 uncharacterized protein LOC111499180 [Cucurbita maxima]6.3e-5659.91Show/hide
Query:  MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGN-LRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSR
        MGQAFRRAA RIKPA S+DS+ASSLKMESVVD KPPPRAAEKARESG+ DS   +    GN L     Q D  L+                    Q+  R
Subjt:  MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGN-LRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSR

Query:  EVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQI
                                 IRSKPG KLE+ E SVVERY+RPMPK  NTDLKSSKYEDR APPGTLNVAQMRHIILL+EGKADD +GP+ V+QI
Subjt:  EVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQI

Query:  AERCNSVSVHQIQTILQFLSLPPEDSLREKKK
        AER N V V QI+TILQFLSLPPEDSLR+KKK
Subjt:  AERCNSVSVHQIQTILQFLSLPPEDSLREKKK

XP_023547640.1 uncharacterized protein LOC111806523 [Cucurbita pepo subsp. pepo]1.2e-5459.74Show/hide
Query:  MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSRE
        MGQAFRRAA RIKPA S+DS+ASSLKMESVVD KPPPRA EKARESGA DS             L S S+N L                         R+
Subjt:  MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSRE

Query:  VILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQIA
           +  L +++ G           IRSKPG KLE+ E SVVERYDRPMP+  NTDLKSSKYEDR APPGTLNVAQMRHIILL+EGKA+D +GP+ V+QIA
Subjt:  VILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQIA

Query:  ERCNSVSVHQIQTILQFLSLPPEDSLREKKK
        ER N V V QI+TILQFLSLPPEDSLR+KKK
Subjt:  ERCNSVSVHQIQTILQFLSLPPEDSLREKKK

TrEMBL top hitse value%identityAlignment
A0A0A0KCC5 Uncharacterized protein1.2e-5258.12Show/hide
Query:  MGQAFRRAAERIKPAWSVDS-TASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGN-LRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVS
        MGQAFRRAA RIKPA S+DS TASSLKMES+VD KPPPR AEKARESGA DS        GN L     Q D  L+                    Q+V 
Subjt:  MGQAFRRAAERIKPAWSVDS-TASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGN-LRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVS

Query:  REVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQ
        R                         I+SKPG KLE+ E SVVERY RPMPK  +T++ SSKYEDR APPGTLNVAQMR IILL+EGKADD +GP+ +HQ
Subjt:  REVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQ

Query:  IAERCNSVSVHQIQTILQFLSLPPEDSLREKKKD
        IAER N VSV QIQTILQFLSLPPEDSLR+K KD
Subjt:  IAERCNSVSVHQIQTILQFLSLPPEDSLREKKKD

A0A1S3C957 uncharacterized protein LOC103497865 isoform X13.5e-5258.12Show/hide
Query:  MGQAFRRAAERIKPAWSVDS-TASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGN-LRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVS
        MGQAFRRAA RIKPA SVDS TASSLKMES+VD KPPPR AEKARESG+ DS        GN L     Q D  L+                    Q+V 
Subjt:  MGQAFRRAAERIKPAWSVDS-TASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGN-LRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVS

Query:  REVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQ
        R                         I+SKPG KLE+ E SVVERY RPMPK  +T++KSSKYEDR APPGTLNVAQMR IILL+EGKADD +GP+  HQ
Subjt:  REVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQ

Query:  IAERCNSVSVHQIQTILQFLSLPPEDSLREKKKD
        IAER N VSV QIQTILQFLSLPPEDSLR+K  D
Subjt:  IAERCNSVSVHQIQTILQFLSLPPEDSLREKKKD

A0A6J1H4J6 uncharacterized protein LOC1114599754.4e-5560.17Show/hide
Query:  MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSRE
        MGQAFRRAA RIKPA S+DS+ASSLKMESVVD KPPPRAAEKARESGA DS        G++  L S S+N L                         R+
Subjt:  MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSRE

Query:  VILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQIA
           +  L +++ G           IRSKPG KLE+ E SVVERYDRPMP+  NTDLKSSKYEDR APPGTLNVAQMRHI+LL+EGKA+D +GP+ V+QIA
Subjt:  VILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQIA

Query:  ERCNSVSVHQIQTILQFLSLPPEDSLREKKK
        ER N V V QI+TILQFLSLPPEDSLR+KKK
Subjt:  ERCNSVSVHQIQTILQFLSLPPEDSLREKKK

A0A6J1KJ83 uncharacterized protein LOC1114944943.6e-73100Show/hide
Query:  VVSREVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPIC
        VVSREVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPIC
Subjt:  VVSREVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPIC

Query:  VHQIAERCNSVSVHQIQTILQFLSLPPEDSLREKKKDP
        VHQIAERCNSVSVHQIQTILQFLSLPPEDSLREKKKDP
Subjt:  VHQIAERCNSVSVHQIQTILQFLSLPPEDSLREKKKDP

A0A6J1L288 uncharacterized protein LOC1114991803.1e-5659.91Show/hide
Query:  MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGN-LRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSR
        MGQAFRRAA RIKPA S+DS+ASSLKMESVVD KPPPRAAEKARESG+ DS   +    GN L     Q D  L+                    Q+  R
Subjt:  MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGN-LRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSR

Query:  EVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQI
                                 IRSKPG KLE+ E SVVERY+RPMPK  NTDLKSSKYEDR APPGTLNVAQMRHIILL+EGKADD +GP+ V+QI
Subjt:  EVILEMCLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQI

Query:  AERCNSVSVHQIQTILQFLSLPPEDSLREKKK
        AER N V V QI+TILQFLSLPPEDSLR+KKK
Subjt:  AERCNSVSVHQIQTILQFLSLPPEDSLREKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G21400.1 unknown protein6.8e-2451.4Show/hide
Query:  IRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPED
        I++KPG K E+ E SVVE   RP+PK  NT  +S++YE+   P GTLNVAQ+RHI+LL +GK+ D  GP+ V++IAE+   + V Q+Q I QFLSLP E 
Subjt:  IRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQIAERCNSVSVHQIQTILQFLSLPPED

Query:  SLREKKK
        + ++KK+
Subjt:  SLREKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAGGCATTTCGTCGAGCGGCGGAAAGAATCAAGCCGGCTTGGAGCGTGGATTCCACTGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATTGGAAACCT
CCGCCGCGTGCGGCCGAGAAGGCTCGGGAGAGCGGCGCTCATGATTCTGTCAGCACTGTCCAACAGTTAGATGGAAACTTAAGATCTCTCCAAAGTCAGTCCGAT
AATTCTCTTGCCGGCGGGAATGGCCTCATTGGTTATAATATAATTGAATGCTTACCGTTCCCAACTGTTTTTCAGGTGGTGTCTCGGGAAGTAATTCTGGAAATG
TGCTTGAGGAATGAGATCTACGGTTTGATGCCATGCTTAGCCATATGGTGGGTCGAAATTAGATCAAAGCCTGGATCAAAACTTGAGATAAGGGAGGGCTCTGTG
GTGGAGAGATATGACAGACCAATGCCAAAGCAAATAAATACAGATCTAAAATCCAGTAAATACGAGGATCGCACAGCCCCACCAGGAACTTTAAATGTAGCACAG
ATGCGCCACATAATCCTCCTAAATGAAGGAAAGGCTGATGACTTCGAGGGGCCAATATGCGTTCACCAAATTGCTGAAAGGTGTAATAGTGTCAGCGTCCATCAA
ATACAGACGATTTTGCAGTTTCTGTCTCTGCCACCAGAGGACAGTCTTCGAGAGAAAAAGAAGGATCCTTAA
mRNA sequenceShow/hide mRNA sequence
CCCTCCAACTTTCTTTCATTTCAGAAACTTCAAAGCGGCTCGAGTTCGGCAACTCAGTAAAACCGAGTTGCGACTCACCGATTCGTCATTTCAATTTTCGTCTCC
ATTTCTCCTGAAAATATAGTCATTAAACCCTCCCACGCGTAGGGTTCTTGATTCTTACGCTGGTTCTGCGACAAATTTCGAATGATTCTGAATCTCCGATTCCAG
TTCGTTCAGTAAGATCGCTTCTCGTTTTGAACAAGGAAGCGATGGGACAGGCATTTCGTCGAGCGGCGGAAAGAATCAAGCCGGCTTGGAGCGTGGATTCCACTG
CCTCTTCGTTGAAAATGGAGAGCGTCGTCGATTGGAAACCTCCGCCGCGTGCGGCCGAGAAGGCTCGGGAGAGCGGCGCTCATGATTCTGTCAGCACTGTCCAAC
AGTTAGATGGAAACTTAAGATCTCTCCAAAGTCAGTCCGATAATTCTCTTGCCGGCGGGAATGGCCTCATTGGTTATAATATAATTGAATGCTTACCGTTCCCAA
CTGTTTTTCAGGTGGTGTCTCGGGAAGTAATTCTGGAAATGTGCTTGAGGAATGAGATCTACGGTTTGATGCCATGCTTAGCCATATGGTGGGTCGAAATTAGAT
CAAAGCCTGGATCAAAACTTGAGATAAGGGAGGGCTCTGTGGTGGAGAGATATGACAGACCAATGCCAAAGCAAATAAATACAGATCTAAAATCCAGTAAATACG
AGGATCGCACAGCCCCACCAGGAACTTTAAATGTAGCACAGATGCGCCACATAATCCTCCTAAATGAAGGAAAGGCTGATGACTTCGAGGGGCCAATATGCGTTC
ACCAAATTGCTGAAAGGTGTAATAGTGTCAGCGTCCATCAAATACAGACGATTTTGCAGTTTCTGTCTCTGCCACCAGAGGACAGTCTTCGAGAGAAAAAGAAGG
ATCCTTAATAACAGGAATGGAGCCAAGAAAACGAGGGAAGGGGCGTTGCTCCCCTAAGATGAGGTTTTAGATCATATCTTTTGTGTCCTTTATTTTAGATTATAT
TTTCTTTTGCTCCCCTAAGATAAATAGCTTTTGTTTTTAGAATTTTACTAAGATTTTCT
Protein sequenceShow/hide protein sequence
MGQAFRRAAERIKPAWSVDSTASSLKMESVVDWKPPPRAAEKARESGAHDSVSTVQQLDGNLRSLQSQSDNSLAGGNGLIGYNIIECLPFPTVFQVVSREVILEM
CLRNEIYGLMPCLAIWWVEIRSKPGSKLEIREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAQMRHIILLNEGKADDFEGPICVHQIAERCNSVSVHQ
IQTILQFLSLPPEDSLREKKKDP