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CmaCh08G012680 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G012680
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description60S ribosomal protein L29
Genome locationCma_Chr08:7716933..7717845
RNA-Seq ExpressionCmaCh08G012680
SyntenyCmaCh08G012680
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002673 - Ribosomal protein L29e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013674.1 60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2396.77Show/hide
Query:  EMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        EMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+G+EEE
Subjt:  EMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

XP_022930442.1 60S ribosomal protein L29-1-like [Cucurbita moschata]4.7e-2398.36Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRN RYAKKHNNKSGESGTEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

XP_022959482.1 60S ribosomal protein L29-1-like [Cucurbita moschata]4.7e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+G+EEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

XP_023000056.1 60S ribosomal protein L29-1-like [Cucurbita maxima]7.3e-24100Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

XP_023514068.1 60S ribosomal protein L29-1-like [Cucurbita pepo subsp. pepo]2.1e-2398.36Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK GESGTEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

TrEMBL top hitse value%identityAlignment
A0A6J1EQI3 60S ribosomal protein L292.3e-2398.36Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRN RYAKKHNNKSGESGTEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

A0A6J1H4N3 60S ribosomal protein L292.3e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+G+EEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

A0A6J1KET9 60S ribosomal protein L293.5e-24100Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

A0A6J1L1Y3 60S ribosomal protein L293.9e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHR+TSTKGMDPKFLRNQRYAKKHNNKSGE+GTEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

A0A6J1L4P4 60S ribosomal protein L292.3e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+G+EEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

SwissProt top hitse value%identityAlignment
P47914 60S ribosomal protein L294.9e-1578.85Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q58DW3 60S ribosomal protein L294.9e-1578.85Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q84WM0 60S ribosomal protein L29-22.3e-2081.97Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE+   EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

Q8HXB8 60S ribosomal protein L294.9e-1578.85Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q9M7X7 60S ribosomal protein L29-11.7e-2080.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE+ + EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family1.9e-2281.25Show/hide
Query:  VREMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        V EMAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE+   EE
Subjt:  VREMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

AT3G06680.2 Ribosomal L29e protein family1.6e-2181.97Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE+   EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

AT3G06700.1 Ribosomal L29e protein family1.2e-2180.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE+ + EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

AT3G06700.2 Ribosomal L29e protein family1.2e-2180.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE+ + EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

AT3G06700.3 Ribosomal L29e protein family1.2e-2180.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE+ + EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTACACCAGGCTAAGTCCTTCGGGTCGACTCTGCGCCGAGGCGAAGGAAACCCTAGAATTTGCAGCCGCCGCTGGGTCCGAGAAATGGCCAAGTCGAAG
AACCACACAGCGCACAATCAGTCCCGAAAAGCCCATAGGAATGGCATCAAGAAGCCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTCTG
AGAAACCAAAGGTACGCCAAGAAACACAACAACAAGAGTGGTGAAAGCGGTACTGAGGAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTACACCAGGCTAAGTCCTTCGGGTCGACTCTGCGCCGAGGCGAAGGAAACCCTAGAATTTGCAGCCGCCGCTGGGTCCGAGAAATGGCCAAGTCGAAG
AACCACACAGCGCACAATCAGTCCCGAAAAGCCCATAGGAATGGCATCAAGAAGCCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTCTG
AGAAACCAAAGGTACGCCAAGAAACACAACAACAAGAGTGGTGAAAGCGGTACTGAGGAAGAGTAATTTAGAACGCCGTCAATTTGAATTTTGAGCCTGCTTCGA
TTGAACATTTTTATGTCTCTGCCCTTTTTGTTCATTAGTCTAGTAATCTTGACTTGAATGTAACGAGTCCTGTTACGACTATCGGTTAACCTGTTCTGGAAGTTC
AAATTTTGAGTGATTGATTGTGTTTTCACACTCATTTCTGCATTCTCTCTTCTTTCTTCTTCTTCTGGTTTTAATGGCTCCT
Protein sequenceShow/hide protein sequence
MPLHQAKSFGSTLRRGEGNPRICSRRWVREMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE