; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh08G012830 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G012830
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein SINE3
Genome locationCma_Chr08:7776006..7777088
RNA-Seq ExpressionCmaCh08G012830
SyntenyCmaCh08G012830
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594019.1 hypothetical protein SDJN03_13495, partial [Cucurbita argyrosperma subsp. sororia]1.9e-10797.7Show/hide
Query:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
        MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPI KEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
Subjt:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN

Query:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
        KQLDKVPVNFG SNNLDEASAGSVEAEIAVNYLRRAL QVLQSTDVDHQSKKLIDASVRIIVD+FLAIPQERDLITRLISSKSHVLSLGLFLWIIVLV A
Subjt:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA

Query:  FFSGSGVENCFIGPLPT
        FFSGSGVENCFIGPLPT
Subjt:  FFSGSGVENCFIGPLPT

XP_022930352.1 uncharacterized protein LOC111436822 [Cucurbita moschata]1.3e-10898.62Show/hide
Query:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
        MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
Subjt:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN

Query:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
        KQLDKVPVNFG SNNLDEASAGSVEAEIAVNYLRRAL QVLQSTDVDHQSKKLIDASVRIIVD+FLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
Subjt:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA

Query:  FFSGSGVENCFIGPLPT
        FFSGSGVENCFIGPLPT
Subjt:  FFSGSGVENCFIGPLPT

XP_022999957.1 uncharacterized protein LOC111494286 [Cucurbita maxima]1.4e-110100Show/hide
Query:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
        MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
Subjt:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN

Query:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
        KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
Subjt:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA

Query:  FFSGSGVENCFIGPLPT
        FFSGSGVENCFIGPLPT
Subjt:  FFSGSGVENCFIGPLPT

XP_023514806.1 uncharacterized protein LOC111779010 [Cucurbita pepo subsp. pepo]1.3e-10696.77Show/hide
Query:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
        MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVV NI+QIPDID+SFLQDVNPALSVSCESSLFPEL PSSVVTFDN
Subjt:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN

Query:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
        KQLDKVPVNFG SNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVD+FLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
Subjt:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA

Query:  FFSGSGVENCFIGPLPT
        FFSG GVENCFIGPLPT
Subjt:  FFSGSGVENCFIGPLPT

XP_038876305.1 uncharacterized protein LOC120068561 [Benincasa hispida]8.7e-8478.34Show/hide
Query:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
        MEK+ K+YQTP RDQ ANRRS+KP KI K LTATFSS  DDKIQPI KEDFSPISVV++I+QIPDIDS+FLQ VNPA S SCE+SLF +LSPSSVV+FDN
Subjt:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN

Query:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
        +QLDKVPVNF  SN++DEASAGSVE +IAVN LRRAL QVLQSTDVDHQSKKLIDAS+ IIVDDFLAIPQERD I +LIS K+HVLSL +FLWIIVL +A
Subjt:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA

Query:  FFSGSGVENCFIGPLPT
        FF GSGV++ FIGPLPT
Subjt:  FFSGSGVENCFIGPLPT

TrEMBL top hitse value%identityAlignment
A0A1S4E1Y8 uncharacterized protein LOC1034977816.8e-7470.51Show/hide
Query:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
        MEKR K++QTP R+Q  NRRS+KP KI K LTA+FSS  +DKI  I KE+ SPISVVS+++QI DIDSSFLQ VNP  S  C++SLFP+LSPSSVV+FDN
Subjt:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN

Query:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
        + LDKV V+F  SN+++EASAGS+EAEIAVN LRRAL QVL STDVDHQSKKLIDAS+RIIVDDFLAIPQERD I +LIS K++VLS+ +FLWI+VL +A
Subjt:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA

Query:  FFSGSGVENCFIGPLPT
        FF GSGV++ F GPLPT
Subjt:  FFSGSGVENCFIGPLPT

A0A6J1CAA2 uncharacterized protein LOC1110098281.4e-7472.35Show/hide
Query:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
        MEKR KEYQTP RD AANRRS+KP KI KSL ATFSS  DDK+QPI  EDFSPI  VS+I+Q+PD+D SFLQ VNPALS S ESS FP+LSPSSVVT +N
Subjt:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN

Query:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
        +Q DK+PVNF  SN+L + SA SVEAEIAV++LRRAL QVLQSTDVDHQSKKL+DAS+RIIV+DF+AIPQE+D I +LIS+KS VLSL  FLWII+L LA
Subjt:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA

Query:  FFSGSGVENCFIGPLPT
        FF GSG ++ F GP PT
Subjt:  FFSGSGVENCFIGPLPT

A0A6J1EQ83 uncharacterized protein LOC1114368226.5e-10998.62Show/hide
Query:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
        MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
Subjt:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN

Query:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
        KQLDKVPVNFG SNNLDEASAGSVEAEIAVNYLRRAL QVLQSTDVDHQSKKLIDASVRIIVD+FLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
Subjt:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA

Query:  FFSGSGVENCFIGPLPT
        FFSGSGVENCFIGPLPT
Subjt:  FFSGSGVENCFIGPLPT

A0A6J1H5Y6 uncharacterized protein LOC111460327 isoform X12.2e-7774.65Show/hide
Query:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
        ME+R K+ QTP RDQAANRRS+KPLKI K LTATFSS  DDKIQ   K+DFS ISVVS+++QIPDID SFL DVNPALS  C SSL P+LSPSSVVTFDN
Subjt:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN

Query:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
         QLDKVPVNF  SN+LDE  AGSV AEIAV+ L RAL QVLQSTDVDHQ+KKLIDAS+RIIVDDFLAIPQ+RD I ++IS+K+ VLS+ LFLWIIVL LA
Subjt:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA

Query:  FFSGSGVENCFIGPLPT
        FF  S V++ FIGPLPT
Subjt:  FFSGSGVENCFIGPLPT

A0A6J1KL67 uncharacterized protein LOC1114942866.9e-111100Show/hide
Query:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
        MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN
Subjt:  MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDN

Query:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
        KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA
Subjt:  KQLDKVPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLA

Query:  FFSGSGVENCFIGPLPT
        FFSGSGVENCFIGPLPT
Subjt:  FFSGSGVENCFIGPLPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAGGACGAAAGAATACCAAACTCCTCTGAGAGATCAAGCTGCGAATCGTAGATCAAAGAAGCCTCTGAAGATCACCAAGAGTTTGACTGCCACATTT
TCATCATTTTGCGACGATAAAATCCAGCCAATTTTGAAGGAAGACTTTTCTCCGATTTCCGTTGTCTCAAACATCAGTCAAATTCCAGATATCGACAGTAGTTTC
TTGCAAGATGTCAACCCAGCTCTTTCAGTTTCCTGTGAGAGCTCGCTTTTCCCCGAACTTTCTCCATCTTCAGTTGTTACTTTTGACAATAAGCAGCTTGACAAG
GTTCCAGTTAATTTTGGTGAATCTAATAATTTAGATGAAGCAAGCGCGGGTTCAGTGGAGGCGGAGATTGCCGTGAATTACTTAAGGCGTGCTCTTATTCAAGTC
TTGCAATCGACGGATGTTGATCATCAGTCTAAGAAGCTTATAGATGCATCCGTGAGGATCATTGTGGACGACTTTCTCGCCATACCTCAAGAGCGAGACCTGATT
ACTCGGCTTATTTCTTCCAAAAGTCATGTTCTGTCTCTAGGTTTATTCCTATGGATCATCGTCTTGGTATTGGCTTTCTTTTCTGGTTCGGGAGTCGAGAACTGT
TTCATTGGTCCACTGCCAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAAGGACGAAAGAATACCAAACTCCTCTGAGAGATCAAGCTGCGAATCGTAGATCAAAGAAGCCTCTGAAGATCACCAAGAGTTTGACTGCCACATTT
TCATCATTTTGCGACGATAAAATCCAGCCAATTTTGAAGGAAGACTTTTCTCCGATTTCCGTTGTCTCAAACATCAGTCAAATTCCAGATATCGACAGTAGTTTC
TTGCAAGATGTCAACCCAGCTCTTTCAGTTTCCTGTGAGAGCTCGCTTTTCCCCGAACTTTCTCCATCTTCAGTTGTTACTTTTGACAATAAGCAGCTTGACAAG
GTTCCAGTTAATTTTGGTGAATCTAATAATTTAGATGAAGCAAGCGCGGGTTCAGTGGAGGCGGAGATTGCCGTGAATTACTTAAGGCGTGCTCTTATTCAAGTC
TTGCAATCGACGGATGTTGATCATCAGTCTAAGAAGCTTATAGATGCATCCGTGAGGATCATTGTGGACGACTTTCTCGCCATACCTCAAGAGCGAGACCTGATT
ACTCGGCTTATTTCTTCCAAAAGTCATGTTCTGTCTCTAGGTTTATTCCTATGGATCATCGTCTTGGTATTGGCTTTCTTTTCTGGTTCGGGAGTCGAGAACTGT
TTCATTGGTCCACTGCCAACTTAA
Protein sequenceShow/hide protein sequence
MEKRTKEYQTPLRDQAANRRSKKPLKITKSLTATFSSFCDDKIQPILKEDFSPISVVSNISQIPDIDSSFLQDVNPALSVSCESSLFPELSPSSVVTFDNKQLDK
VPVNFGESNNLDEASAGSVEAEIAVNYLRRALIQVLQSTDVDHQSKKLIDASVRIIVDDFLAIPQERDLITRLISSKSHVLSLGLFLWIIVLVLAFFSGSGVENC
FIGPLPT