; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh09G005170 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh09G005170
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptioncryptochrome DASH, chloroplastic/mitochondrial-like
Genome locationCma_Chr09:2299560..2302751
RNA-Seq ExpressionCmaCh09G005170
SyntenyCmaCh09G005170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022975757.1 cryptochrome DASH, chloroplastic/mitochondrial-like [Cucurbita maxima]2.8e-3291.86Show/hide
Query:  LCDDGFHQSRIELSSSHGGSERDLTLTILRNLDETLLIPGSAACLKQSGENSSIIGRQSSKLLSIVVIENNMNAQDPSQNVQRLSR
        L DDGFHQSRIELSSSHGGSERDL LT LRNL+ETLLIPGSAACLKQSGEN SIIGRQSSKLLSIVVIENNMNAQDPSQ+VQ LSR
Subjt:  LCDDGFHQSRIELSSSHGGSERDLTLTILRNLDETLLIPGSAACLKQSGENSSIIGRQSSKLLSIVVIENNMNAQDPSQNVQRLSR
TrEMBL top hitse value%identityAlignment
A0A6J1IDX9 cryptochrome DASH, chloroplastic/mitochondrial-like1.4e-3291.86Show/hide
Query:  LCDDGFHQSRIELSSSHGGSERDLTLTILRNLDETLLIPGSAACLKQSGENSSIIGRQSSKLLSIVVIENNMNAQDPSQNVQRLSR
        L DDGFHQSRIELSSSHGGSERDL LT LRNL+ETLLIPGSAACLKQSGEN SIIGRQSSKLLSIVVIENNMNAQDPSQ+VQ LSR
Subjt:  LCDDGFHQSRIELSSSHGGSERDLTLTILRNLDETLLIPGSAACLKQSGENSSIIGRQSSKLLSIVVIENNMNAQDPSQNVQRLSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTACCGTGTGAGGCACCGGATTTATCGCTAGGTGCTGGAGCAGCCGCATCATCCTCACCGTCGGCGGCCTTCGGTGGAGACCTTGCCGGCGAATCGGCAACAAC
CTTCGGTTTTTTGGCGGGAGGAGCCCTAGCCTTTGACGGAGTCTTAGCGGAAGGAGCCGGTGCCTTTTTAGGAGATCCGACGGGAGAAAACGACGCCGGTGGTGGTGATG
ATGGAGAGGAGCGAGATATTGTACGGCTGTGCGACGACGGATTTCACCAATCTCGAATCGAACTGAGTTCCTCTCACGGCGGATCCGAACGCGATCTCGCCTTGACCAAT
CTGCGTAACCTTAATGAAACCTTGCTGATTCCTGGCAGCGCCGCTTGCCTGAAACAGAGTGGTGAGAACGATAGGCCAGAAACGGCGCCGTTGTCGAGGGCGAGGATAGT
GATGGTTTTACGGCTGTTAATGTCACCGGCGAGATTTGTTTGTGTGAGGACATCGTTCAAATTATTGAAATCGGGGAACTGGCTTAGGAGCTTAGTGATATTGAAAGCGG
AGGCTGCAGAGAAGAGGAGGAAACTCAAAAGCAGGGCGGCGGAAGTGGCTCTGGAATCCATTGTTATTCGAGCCAGAAACACCGAGATCACAGCCATAACAGCCGCAGCT
CCGATGAAGCTACCGCGTGAGGCGCCGGATTCATCGCTAGGTGCTGGAGCAGCCGCATCATCATCACCGTCGGCTGCTTTCGGTGGAGACCTTGCCGGCGAATCGGCAAC
AACCTTCGGTTTTTTGGCGGGAGGAGCCCTAGCCTTTGACGGAGTCTTAGCGGAAGGAGCCGGTGCCTTTTTAGGTGATCCGACGGGAGAAAACGACGACGGTGGTGGTG
GTGTTGGAGAGGAGCGAGATATTGTACGGCTGTGCGACGACGGATTTCACCAATCTCGAATCGAACTGAGTTCCTCTCACGGCGGATCCGAACGCGATCTCACCTTGACC
ATTCTGCGTAACCTTGATGAAACCTTGCTGATTCCTGGCAGCGCCGCTTGCCTGAAACAGAGTGGTGAGAACAGTAGTATTATCGGAAGACAATCTAGCAAGCTTCTGAG
CATCGTAGTAATCGAGAATAACATGAACGCTCAAGATCCTTCTCAGAACGTCCAACGGCTTTCCAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTACCGTGTGAGGCACCGGATTTATCGCTAGGTGCTGGAGCAGCCGCATCATCCTCACCGTCGGCGGCCTTCGGTGGAGACCTTGCCGGCGAATCGGCAACAAC
CTTCGGTTTTTTGGCGGGAGGAGCCCTAGCCTTTGACGGAGTCTTAGCGGAAGGAGCCGGTGCCTTTTTAGGAGATCCGACGGGAGAAAACGACGCCGGTGGTGGTGATG
ATGGAGAGGAGCGAGATATTGTACGGCTGTGCGACGACGGATTTCACCAATCTCGAATCGAACTGAGTTCCTCTCACGGCGGATCCGAACGCGATCTCGCCTTGACCAAT
CTGCGTAACCTTAATGAAACCTTGCTGATTCCTGGCAGCGCCGCTTGCCTGAAACAGAGTGGTGAGAACGATAGGCCAGAAACGGCGCCGTTGTCGAGGGCGAGGATAGT
GATGGTTTTACGGCTGTTAATGTCACCGGCGAGATTTGTTTGTGTGAGGACATCGTTCAAATTATTGAAATCGGGGAACTGGCTTAGGAGCTTAGTGATATTGAAAGCGG
AGGCTGCAGAGAAGAGGAGGAAACTCAAAAGCAGGGCGGCGGAAGTGGCTCTGGAATCCATTGTTATTCGAGCCAGAAACACCGAGATCACAGCCATAACAGCCGCAGCT
CCGATGAAGCTACCGCGTGAGGCGCCGGATTCATCGCTAGGTGCTGGAGCAGCCGCATCATCATCACCGTCGGCTGCTTTCGGTGGAGACCTTGCCGGCGAATCGGCAAC
AACCTTCGGTTTTTTGGCGGGAGGAGCCCTAGCCTTTGACGGAGTCTTAGCGGAAGGAGCCGGTGCCTTTTTAGGTGATCCGACGGGAGAAAACGACGACGGTGGTGGTG
GTGTTGGAGAGGAGCGAGATATTGTACGGCTGTGCGACGACGGATTTCACCAATCTCGAATCGAACTGAGTTCCTCTCACGGCGGATCCGAACGCGATCTCACCTTGACC
ATTCTGCGTAACCTTGATGAAACCTTGCTGATTCCTGGCAGCGCCGCTTGCCTGAAACAGAGTGGTGAGAACAGTAGTATTATCGGAAGACAATCTAGCAAGCTTCTGAG
CATCGTAGTAATCGAGAATAACATGAACGCTCAAGATCCTTCTCAGAACGTCCAACGGCTTTCCAGATAG
Protein sequenceShow/hide protein sequence
MKLPCEAPDLSLGAGAAASSSPSAAFGGDLAGESATTFGFLAGGALAFDGVLAEGAGAFLGDPTGENDAGGGDDGEERDIVRLCDDGFHQSRIELSSSHGGSERDLALTN
LRNLNETLLIPGSAACLKQSGENDRPETAPLSRARIVMVLRLLMSPARFVCVRTSFKLLKSGNWLRSLVILKAEAAEKRRKLKSRAAEVALESIVIRARNTEITAITAAA
PMKLPREAPDSSLGAGAAASSSPSAAFGGDLAGESATTFGFLAGGALAFDGVLAEGAGAFLGDPTGENDDGGGGVGEERDIVRLCDDGFHQSRIELSSSHGGSERDLTLT
ILRNLDETLLIPGSAACLKQSGENSSIIGRQSSKLLSIVVIENNMNAQDPSQNVQRLSR