; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh09G005200 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh09G005200
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionreplication protein A 32 kDa subunit A-like
Genome locationCma_Chr09:2308911..2313316
RNA-Seq ExpressionCmaCh09G005200
SyntenyCmaCh09G005200
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591621.1 Replication protein A 32 kDa subunit A, partial [Cucurbita argyrosperma subsp. sororia]1.2e-14398.17Show/hide
Query:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFT SQT DSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTAS  SVLPS
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS

Query:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYST+DEFHFKSAA
Subjt:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

KAG7024504.1 Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma]9.4e-14498.53Show/hide
Query:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFT SQT DSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTAS  SVLPS
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS

Query:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_022936562.1 replication protein A 32 kDa subunit A-like [Cucurbita moschata]3.2e-14498.53Show/hide
Query:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFT SQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTAS  SVLPS
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS

Query:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_022976184.1 replication protein A 32 kDa subunit A-like [Cucurbita maxima]4.8e-148100Show/hide
Query:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS

Query:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_023535200.1 replication protein A 32 kDa subunit A-like [Cucurbita pepo subsp. pepo]6.1e-14397.8Show/hide
Query:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTFSQTNDSSSAKNR+TPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS
        DTKQMDEI DGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQF SSDSIVKTPMQNGSSGY TAS  SVLPS
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS

Query:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

TrEMBL top hitse value%identityAlignment
A0A0A0LEG7 Uncharacterized protein3.4e-13187.55Show/hide
Query:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSS+QFDS SGFT SQTNDSSSAK+RE+PGL+P TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS
        DT QM+EIQDGMY+RVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQNL G GSTQ Q+SDSIVKTP+QNGS+GY T S  S +PS
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS

Query:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKK+CD+L+LDYLQLPSSVAKERGIH+DELSQQLK+PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A1S3CR64 replication protein A 32 kDa subunit A-like1.8e-13289.01Show/hide
Query:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSS+QFDSGSGFT SQTNDSSSAK+RE+PGLVP TVKQISEASHSGEEKANF IN VDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS
        DTKQM+EIQDGMY+RVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHF+ECIH+HLRNSKLQNL G GSTQ Q+SDSIVKTP+QNGSSGY T S  S +PS
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS

Query:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKK+CD+L+LDYLQLPSSVAKERGIHRDELSQQLKIPMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1CUB8 replication protein A 32 kDa subunit A6.9e-12486.81Show/hide
Query:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFT SQ  DS+SAK+RE+PGLVP TVKQISEA HSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF+VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS
        DTKQMD+IQDGMYIRVNGHLKIFQ N QIFAFSVRP+TN DEITFHFIECIH++LRNSKLQ LNGV STQ QSSDS V   +Q+GSSGYQTAS  S L S
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS

Query:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
         QHTVDVKKN DDL+LDYLQLPSSVAKE+GIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1F8S8 replication protein A 32 kDa subunit A-like1.6e-14498.53Show/hide
Query:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFT SQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTAS  SVLPS
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS

Query:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1IMU1 replication protein A 32 kDa subunit A-like2.3e-148100Show/hide
Query:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPS

Query:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C9.2e-2540Show/hide
Query:  SGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEA-----SHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK
        S +G   +     S  ++    G VPATV  IS +     +  G     F+I+GV+ TNV ++G+V     R+TD+ F +DD TG+I   RW+ D  DT+
Subjt:  SGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEA-----SHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK

Query:  QMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRN--SKLQ
            IQ+G+Y++V  +L  FQ+ KQ  A S+RPI NF+E+  HFIEC+H HL +  SK+Q
Subjt:  QMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRN--SKLQ

Q6H7J5 Replication protein A 32 kDa subunit B2.6e-4335.25Show/hide
Query:  SSSQFDSGSGFTFSQTNDSSSA---------KNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCK
        ++S    G GF  SQ  +++           K+R    L+P TVKQI +AS + ++K+NFA+NG++++ V +VG++  K +R TD++F +DDGTGR+   
Subjt:  SSSQFDSGSGFTFSQTNDSSSA---------KNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCK

Query:  RWVNDTFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTAS
        RW ND+ DTK+M +IQ+G Y+ VNG LK FQ  +Q+ A+SVR ITNF+++T HF+ C+H HL  ++ ++     +     + ++ +  M    S     +
Subjt:  RWVNDTFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTAS

Query:  SVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS
        S    P    T     N  DL+L+    P+ +  + G+  D +S++L +P E +   I    D G +Y+TID+ H+KS
Subjt:  SVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS

Q6K9U2 Replication protein A 32 kDa subunit A8.5e-4741.67Show/hide
Query:  FSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHS---GEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVND
        FS SQF S        T  S   K+R     +P TVKQISEA  S   GE+ A F ++GV+  NV +VG VS K ERNTD++F +DDGTGR+   RWVND
Subjt:  FSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHS---GEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVND

Query:  TFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVL
          D+ +   +Q+GMY+ V G LK  Q  K+  AF++RP+T+++E+T HFI+C+  HL N+K Q    +GS     + S + +   NG S   T +SV   
Subjt:  TFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVL

Query:  PSEQHTV--DVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSA
        P+   +V    K + +  +L+  + P++V  E G+H DE+ ++ ++P  KI  +I  L D G IYSTIDE H+KSA
Subjt:  PSEQHTV--DVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSA

Q8LFJ8 Replication protein A 32 kDa subunit B6.5e-4738.93Show/hide
Query:  FSSSQFDSGSGFTFSQT-----NDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWV
        F  +   +G GF  SQ        SSS KNR+   L+P T+KQ+S AS +GE  +NF+I+GVDI  V IVG++S    R T + F+VDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTFSQT-----NDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWV

Query:  NDTFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQN---LNGVGSTQFQSSDSIVKTPMQNGSSGYQTAS
        +   +T++M+ ++ GMY+R++GHLKIFQ  + +  FSVRP+T+F+EI  HF EC++ H+ N+KL+         + + Q   S + TP    +  YQT  
Subjt:  NDTFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQN---LNGVGSTQFQSSDSIVKTPMQNGSSGYQTAS

Query:  SVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        S +  P++ +  D        +L+YL  P  +  E G+H D ++++L+IP+ ++  ++  L ++G IYST+DE  FKS A
Subjt:  SVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

Q9ZQ19 Replication protein A 32 kDa subunit A1.1e-6749.47Show/hide
Query:  MFSSSQFD-----SGSGFTFSQ-----TNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGR
        MFSSSQF+     SG GF  SQ      + SS+AKNR+  GLVP TVKQI+E   S  EK+   ING+ +TNV++VG V +K E + T++ F +DDGTGR
Subjt:  MFSSSQFD-----SGSGFTFSQ-----TNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGR

Query:  IGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGY
        I CKRWV++TFD ++M+ ++DG Y+R++GHLK FQ   Q+  FSVRPI +F+E+TFH+IECIH + +NS+ Q       TQ       V T  Q GS+  
Subjt:  IGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGY

Query:  QTASSVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK
        Q      V+ S+ +  + +KN DD+ILDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  QTASSVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A28.1e-6949.47Show/hide
Query:  MFSSSQFD-----SGSGFTFSQ-----TNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGR
        MFSSSQF+     SG GF  SQ      + SS+AKNR+  GLVP TVKQI+E   S  EK+   ING+ +TNV++VG V +K E + T++ F +DDGTGR
Subjt:  MFSSSQFD-----SGSGFTFSQ-----TNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGR

Query:  IGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGY
        I CKRWV++TFD ++M+ ++DG Y+R++GHLK FQ   Q+  FSVRPI +F+E+TFH+IECIH + +NS+ Q       TQ       V T  Q GS+  
Subjt:  IGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGY

Query:  QTASSVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK
        Q      V+ S+ +  + +KN DD+ILDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  QTASSVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK

AT2G24490.2 replicon protein A28.1e-6949.47Show/hide
Query:  MFSSSQFD-----SGSGFTFSQ-----TNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGR
        MFSSSQF+     SG GF  SQ      + SS+AKNR+  GLVP TVKQI+E   S  EK+   ING+ +TNV++VG V +K E + T++ F +DDGTGR
Subjt:  MFSSSQFD-----SGSGFTFSQ-----TNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGR

Query:  IGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGY
        I CKRWV++TFD ++M+ ++DG Y+R++GHLK FQ   Q+  FSVRPI +F+E+TFH+IECIH + +NS+ Q       TQ       V T  Q GS+  
Subjt:  IGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGY

Query:  QTASSVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK
        Q      V+ S+ +  + +KN DD+ILDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  QTASSVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK

AT3G02920.1 Replication protein A, subunit RPA324.6e-4838.93Show/hide
Query:  FSSSQFDSGSGFTFSQT-----NDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWV
        F  +   +G GF  SQ        SSS KNR+   L+P T+KQ+S AS +GE  +NF+I+GVDI  V IVG++S    R T + F+VDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTFSQT-----NDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWV

Query:  NDTFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQN---LNGVGSTQFQSSDSIVKTPMQNGSSGYQTAS
        +   +T++M+ ++ GMY+R++GHLKIFQ  + +  FSVRP+T+F+EI  HF EC++ H+ N+KL+         + + Q   S + TP    +  YQT  
Subjt:  NDTFDTKQMDEIQDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQN---LNGVGSTQFQSSDSIVKTPMQNGSSGYQTAS

Query:  SVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        S +  P++ +  D        +L+YL  P  +  E G+H D ++++L+IP+ ++  ++  L ++G IYST+DE  FKS A
Subjt:  SVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

AT3G02920.2 Replication protein A, subunit RPA321.0e-4739.61Show/hide
Query:  SSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLK
        SS +NR+   L+P T+KQ+S AS +GE  +NF+I+GVDI  V IVG++S    R T + F+VDDGTG + C RW +   +T++M+ ++ GMY+R++GHLK
Subjt:  SSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHLK

Query:  IFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQN---LNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPSEQHTVDVKKNCDDLILDY
        IFQ  + +  FSVRP+T+F+EI  HF EC++ H+ N+KL+         + + Q   S + TP    +  YQT  S +  P++ +  D        +L+Y
Subjt:  IFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQN---LNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPSEQHTVDVKKNCDDLILDY

Query:  LQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        L  P  +  E G+H D ++++L+IP+ ++  ++  L ++G IYST+DE  FKS A
Subjt:  LQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCCAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTTTTCTCAGACCAATGACTCTTCTTCGGCGAAGAATCGAGAAACGCCGGGCCTGGTTCCGGCAACTGT
AAAACAGATAAGCGAAGCTTCGCATTCTGGCGAAGAGAAGGCCAACTTCGCAATCAACGGCGTTGACATTACAAATGTTACAATCGTTGGGAAGGTCTCTGAGAAAGCTG
AAAGGAATACGGACATCACATTCATTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAATGACACTTTCGACACTAAGCAAATGGATGAAATACAAGAT
GGAATGTATATACGGGTGAATGGGCATTTGAAAATATTCCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGCCTATTACAAATTTTGATGAAATTACCTTCCACTT
TATTGAATGCATACATGAGCACTTGCGGAATTCCAAGTTACAGAATCTCAATGGAGTTGGATCAACACAGTTCCAATCCTCGGATTCAATTGTGAAGACTCCAATGCAGA
ATGGCTCGAGTGGATATCAGACAGCATCTTCAGTTTCAGTACTACCATCTGAGCAGCACACTGTTGATGTTAAGAAGAATTGTGATGACTTGATCCTCGACTATCTTCAG
CTGCCCTCCAGCGTTGCCAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTAAAGATTCCAATGGAGAAAATACTTAACTCCATAAGGTCTCTTGAAGATGA
AGGTTTGATATATTCCACCATAGATGAGTTTCATTTCAAGTCTGCTGCATAG
mRNA sequenceShow/hide mRNA sequence
ACATTGCCGCTCACAAGATCGGGCGGGAAATCTGAGAATCAGTGGCGGGAAAATGAAAAGCTTCTACTTCATAGGGTTTTAAAGAATGTTCTCCAGCAGCCAGTTTGATT
CCGGCAGTGGATTTACGTTTTCTCAGACCAATGACTCTTCTTCGGCGAAGAATCGAGAAACGCCGGGCCTGGTTCCGGCAACTGTAAAACAGATAAGCGAAGCTTCGCAT
TCTGGCGAAGAGAAGGCCAACTTCGCAATCAACGGCGTTGACATTACAAATGTTACAATCGTTGGGAAGGTCTCTGAGAAAGCTGAAAGGAATACGGACATCACATTCAT
TGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAATGACACTTTCGACACTAAGCAAATGGATGAAATACAAGATGGAATGTATATACGGGTGAATGGGC
ATTTGAAAATATTCCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGCCTATTACAAATTTTGATGAAATTACCTTCCACTTTATTGAATGCATACATGAGCACTTG
CGGAATTCCAAGTTACAGAATCTCAATGGAGTTGGATCAACACAGTTCCAATCCTCGGATTCAATTGTGAAGACTCCAATGCAGAATGGCTCGAGTGGATATCAGACAGC
ATCTTCAGTTTCAGTACTACCATCTGAGCAGCACACTGTTGATGTTAAGAAGAATTGTGATGACTTGATCCTCGACTATCTTCAGCTGCCCTCCAGCGTTGCCAAAGAAA
GAGGGATACACAGAGATGAACTTTCCCAACAACTAAAGATTCCAATGGAGAAAATACTTAACTCCATAAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGAT
GAGTTTCATTTCAAGTCTGCTGCATAGGATTCCTAACTTTGTAGGTTTTTATTTCTTTTCTTTTATTATGCCTTATGCCTTATGCCTTAGATATGATGCACTAATTACTT
CAAACTCTTATCTTTTTTTTCTTTTTTACTGCCCCTTTCTAAAACTCTAGAATTCAATGTATATGGTGTTTTGAAGCTTTCTTCGTCTAAATACATAATTTTAGGAGGAA
AAA
Protein sequenceShow/hide protein sequence
MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQD
GMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPSEQHTVDVKKNCDDLILDYLQ
LPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA