; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh09G005500 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh09G005500
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCma_Chr09:2491611..2494248
RNA-Seq ExpressionCmaCh09G005500
SyntenyCmaCh09G005500
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591657.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.1e-14686.34Show/hide
Query:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSR+PLRLQE HYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPEN FLGSSRLSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD
        WRLEKM+KENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES KPNADTFFYFISAFAK  D
Subjt:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW
        VNSMEAWYS KRAFEFSADLRTYEALIH                                   GFCKRKDLDELKKFLTVVLDKGWEI WNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEAARL
        FESGEAEGMEEILTKLNEAARL
Subjt:  FESGEAEGMEEILTKLNEAARL

KAG7024539.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-17397.2Show/hide
Query:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSR+PLRLQE HYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPEN FLGSSRLSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD
        WRLEKM+KENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES KPNADTFFYFISAFAK  D
Subjt:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW
        VNSMEAWYSAKRAFEFSADLRTYEALIHGSV SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEI WNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEAARL
        FESGEAEGMEEILTKLNEAARL
Subjt:  FESGEAEGMEEILTKLNEAARL

XP_022936078.1 pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucurbita moschata]4.1e-16293.93Show/hide
Query:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSR+PLRLQE HYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPEN FLGSS LSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD
        WRLEKM+KENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGV+PTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES KPNADTFFYFISAFAK  D
Subjt:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW
        VNSMEAWYSA RAFEFSADLRTYEALIHGSV SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEI WNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW

Query:  FESGEAEGMEEIL
        FESG  +G    L
Subjt:  FESGEAEGMEEIL

XP_022975914.1 pentatricopeptide repeat-containing protein At2g37230-like isoform X1 [Cucurbita maxima]6.2e-179100Show/hide
Query:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD
        WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD
Subjt:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW
        VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEAARL
        FESGEAEGMEEILTKLNEAARL
Subjt:  FESGEAEGMEEILTKLNEAARL

XP_023534997.1 pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like [Cucurbita pepo subsp. pepo]3.3e-17296.89Show/hide
Query:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSRIPLR QEAHYRCICRRFVSTDPSNSILNP VLRLIQEPSSSVKSVLDSPEN FLG+SRLSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD
        WRLEKM+KENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES KPNADTFFYFISAFAK  D
Subjt:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW
        VNSMEAWYSAKRAFEFSADLRTYEALIHGSV SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEI WNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEAARL
        FESGEAEGMEEILTKLNEAARL
Subjt:  FESGEAEGMEEILTKLNEAARL

TrEMBL top hitse value%identityAlignment
A0A0A0LJI4 Uncharacterized protein2.6e-13075.47Show/hide
Query:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MA    RVLALA+  S  +PL+ Q+ HY  I R F STDPS SI NPL+L+L+QEP+SSVKSVLDS EN FL SSRLS  ALVTSLISSS  KKAQL LE
Subjt:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD
        W+LE M+K+NERD DFYI+LI LCG+L+N  LAMRVF  MEFQGVKPTVTAFNSLIE CISS+NMITAFS+FE+MKNS++FKPN DTF+YFISAFAKL D
Subjt:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW
        VNSM+AWYSAK+AFEFS DLRTYEALIHGSV S CFDF V+CF+EM+LS IVPN IIL+NMLEG CKRK+ DE+KKFL VVLD GWEI WNVVEKFIP+W
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNE
        FESGE EGM+EILTKLN+
Subjt:  FESGEAEGMEEILTKLNE

A0A1S3CS56 pentatricopeptide repeat-containing protein At3g09060-like2.5e-13376.18Show/hide
Query:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MA    RVL LA+  S  IPL+ Q+ HY  I R F STDPS SI NPL+L+L+QEP+SSVKSVLDS EN FL SSRLS   LVTSLISSS PKKAQL LE
Subjt:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD
        W+LEKM+K NE DPD YI+LIRLCG+L++  LAMRVFT MEFQGVKPTVTAFNSLIE CISSHNMITAF +FE+MKNS++FKPN DTF+YFIS F+KLRD
Subjt:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW
        VNSM+AWYSAK+AFEFS DLRTYEALIHGSV SKCFDFAV+CF+EMMLS IVPNAIIL+NMLEG CKRK+ DE+KKFL VVLD GWEI WNVVEKFIP+W
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEA
        FESGE EGM+EILTK+N++
Subjt:  FESGEAEGMEEILTKLNEA

A0A5D3E5Z9 Pentatricopeptide repeat-containing protein2.5e-13376.18Show/hide
Query:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MA    RVL LA+  S  IPL+ Q+ HY  I R F STDPS SI NPL+L+L+QEP+SSVKSVLDS EN FL SSRLS   LVTSLISSS PKKAQL LE
Subjt:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD
        W+LEKM+K NE DPD YI+LIRLCG+L++  LAMRVFT MEFQGVKPTVTAFNSLIE CISSHNMITAF +FE+MKNS++FKPN DTF+YFIS F+KLRD
Subjt:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW
        VNSM+AWYSAK+AFEFS DLRTYEALIHGSV SKCFDFAV+CF+EMMLS IVPNAIIL+NMLEG CKRK+ DE+KKFL VVLD GWEI WNVVEKFIP+W
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEA
        FESGE EGM+EILTK+N++
Subjt:  FESGEAEGMEEILTKLNEA

A0A6J1FC94 pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X12.0e-16293.93Show/hide
Query:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSR+PLRLQE HYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPEN FLGSS LSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD
        WRLEKM+KENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGV+PTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES KPNADTFFYFISAFAK  D
Subjt:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW
        VNSMEAWYSA RAFEFSADLRTYEALIHGSV SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEI WNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW

Query:  FESGEAEGMEEIL
        FESG  +G    L
Subjt:  FESGEAEGMEEIL

A0A6J1II25 pentatricopeptide repeat-containing protein At2g37230-like isoform X13.0e-179100Show/hide
Query:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD
        WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD
Subjt:  WRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW
        VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEAARL
        FESGEAEGMEEILTKLNEAARL
Subjt:  FESGEAEGMEEILTKLNEAARL

SwissProt top hitse value%identityAlignment
Q9FLL3 Pentatricopeptide repeat-containing protein At5g41170, mitochondrial4.4e-1028.66Show/hide
Query:  NVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIH
        +V  A+ +F  ME  G++P V  + SL+    +S     A S+   M      KP+  TF   I AF K       E  Y+       + ++ TY +LI+
Subjt:  NVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIH

Query:  GSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKG
        G     C D A + F  M   G  P+ +   +++ GFCK K +D+  K    +  KG
Subjt:  GSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKG

Q9LQ14 Pentatricopeptide repeat-containing protein At1g62930, chloroplastic1.9e-1326.51Show/hide
Query:  LEKMNK-ENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDV
        L+KM K + E D   Y  +I      +NV  A+ +FT M+ +G++P V  +NSLI  C+ ++   +  S            PN  TF   I AF K   +
Subjt:  LEKMNK-ENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDV

Query:  NSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIWF
           E  Y          D+ TY +LI+G       D A   F+ M+     PN +  + +++GFCK K ++E  +    +  +G           I   F
Subjt:  NSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIWF

Query:  ESGEAEGMEEILTKL
        ++G+ +  ++I  K+
Subjt:  ESGEAEGMEEILTKL

Q9M302 Pentatricopeptide repeat-containing protein At3g488101.5e-1020.99Show/hide
Query:  WKALVTSLISSSSPKKAQLALEWRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNS
        + AL+  L      K    A E   E + K    +   Y  LI +      + LA    T M  +G  P +   +SL++ C        A  ++  M   
Subjt:  WKALVTSLISSSSPKKAQLALEWRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNS

Query:  ESFKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFL
           +PN   +   +  F    ++    + +S       S ++RTY +LI+G       D AV  +++M+ SG  PN ++  NM+E  C+     E +  +
Subjt:  ESFKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFL

Query:  TVVLDKGWEIKWNVVEKFIPIWFESGEAEGMEEILTKLNEAAR
         ++  +           FI    ++G  +  E++  ++ +  R
Subjt:  TVVLDKGWEIKWNVVEKFIPIWFESGEAEGMEEILTKLNEAAR

Q9SH26 Pentatricopeptide repeat-containing protein At1g634003.4e-1030.5Show/hide
Query:  AMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVN
        A+ +FT ME +GV+P V  ++SLI  C+ ++   +  S            PN  TF   I AF K   +   E  Y          D+ TY +LI+G   
Subjt:  AMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVN

Query:  SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDE
            D A   F+ M+     PN +  + ++ GFCK K +DE
Subjt:  SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDE

Q9ZUU3 Pentatricopeptide repeat-containing protein At2g372304.4e-1025.98Show/hide
Query:  ERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDVNSMEAWYSA
        ER    Y  L ++        +A R F  M  +GV+PT   +N ++     S  + TA   FE MK +    P+  TF   I+ F + + ++  E  +  
Subjt:  ERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDVNSMEAWYSA

Query:  KRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWN-VVEKFIPIWFESGEAEGM
         +  +    + +Y  +I G +     D  +R F+EM  SGI PNA     +L G C    + E K  L  ++ K    K N +  K +    ++G+    
Subjt:  KRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWN-VVEKFIPIWFESGEAEGM

Query:  EEIL
         E+L
Subjt:  EEIL

Arabidopsis top hitse value%identityAlignment
AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.4e-1426.51Show/hide
Query:  LEKMNK-ENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDV
        L+KM K + E D   Y  +I      +NV  A+ +FT M+ +G++P V  +NSLI  C+ ++   +  S            PN  TF   I AF K   +
Subjt:  LEKMNK-ENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDV

Query:  NSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIWF
           E  Y          D+ TY +LI+G       D A   F+ M+     PN +  + +++GFCK K ++E  +    +  +G           I   F
Subjt:  NSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIWF

Query:  ESGEAEGMEEILTKL
        ++G+ +  ++I  K+
Subjt:  ESGEAEGMEEILTKL

AT1G63400.1 Pentatricopeptide repeat (PPR) superfamily protein2.4e-1130.5Show/hide
Query:  AMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVN
        A+ +FT ME +GV+P V  ++SLI  C+ ++   +  S            PN  TF   I AF K   +   E  Y          D+ TY +LI+G   
Subjt:  AMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVN

Query:  SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDE
            D A   F+ M+     PN +  + ++ GFCK K +DE
Subjt:  SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDE

AT2G37230.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.1e-1125.98Show/hide
Query:  ERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDVNSMEAWYSA
        ER    Y  L ++        +A R F  M  +GV+PT   +N ++     S  + TA   FE MK +    P+  TF   I+ F + + ++  E  +  
Subjt:  ERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDVNSMEAWYSA

Query:  KRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWN-VVEKFIPIWFESGEAEGM
         +  +    + +Y  +I G +     D  +R F+EM  SGI PNA     +L G C    + E K  L  ++ K    K N +  K +    ++G+    
Subjt:  KRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWN-VVEKFIPIWFESGEAEGM

Query:  EEIL
         E+L
Subjt:  EEIL

AT3G48810.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-1120.99Show/hide
Query:  WKALVTSLISSSSPKKAQLALEWRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNS
        + AL+  L      K    A E   E + K    +   Y  LI +      + LA    T M  +G  P +   +SL++ C        A  ++  M   
Subjt:  WKALVTSLISSSSPKKAQLALEWRLEKMNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNS

Query:  ESFKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFL
           +PN   +   +  F    ++    + +S       S ++RTY +LI+G       D AV  +++M+ SG  PN ++  NM+E  C+     E +  +
Subjt:  ESFKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFL

Query:  TVVLDKGWEIKWNVVEKFIPIWFESGEAEGMEEILTKLNEAAR
         ++  +           FI    ++G  +  E++  ++ +  R
Subjt:  TVVLDKGWEIKWNVVEKFIPIWFESGEAEGMEEILTKLNEAAR

AT5G41170.1 Pentatricopeptide repeat (PPR-like) superfamily protein3.1e-1128.66Show/hide
Query:  NVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIH
        +V  A+ +F  ME  G++P V  + SL+    +S     A S+   M      KP+  TF   I AF K       E  Y+       + ++ TY +LI+
Subjt:  NVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDVNSMEAWYSAKRAFEFSADLRTYEALIH

Query:  GSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKG
        G     C D A + F  M   G  P+ +   +++ GFCK K +D+  K    +  KG
Subjt:  GSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTAGCGCGAAACAGGGTTCTGGCATTGGCCAAAGGCGGTTCCTCCAGGATTCCGCTACGGTTACAGGAAGCTCATTATCGATGTATTTGCCGGAGATTT
GTTTCTACTGATCCGTCGAATTCGATTTTGAATCCTCTGGTTCTCAGGTTGATTCAGGAGCCAAGTTCGTCTGTGAAATCCGTGCTTGATTCGCCGGAAAATGAT
TTTCTTGGCAGCTCGCGACTTTCCTGGAAAGCTCTTGTTACGTCTCTTATATCTTCCTCGTCGCCTAAGAAGGCTCAGCTGGCTTTGGAATGGAGATTGGAGAAA
ATGAACAAAGAAAACGAGAGGGATCCTGACTTTTACATCGACCTAATACGTCTTTGTGGAGAGCTTCAGAATGTCCCTCTTGCAATGCGTGTCTTCACAGCTATG
GAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAGAGGTTTGTATATCTTCGCATAATATGATAACTGCCTTCAGCATGTTTGAAATAATG
AAAAATTCTGAAAGTTTTAAACCCAATGCTGACACTTTCTTCTATTTCATTTCGGCATTCGCCAAACTGCGCGATGTAAATTCCATGGAAGCATGGTATTCAGCC
AAAAGAGCGTTTGAATTCTCTGCTGATCTTCGAACCTATGAAGCTCTTATACATGGTAGTGTGAATTCAAAGTGCTTTGACTTTGCTGTTAGATGTTTTGATGAA
ATGATGTTATCTGGCATTGTGCCCAACGCAATCATATTGGATAATATGCTTGAAGGGTTCTGTAAAAGGAAAGATTTGGATGAACTCAAGAAGTTCTTAACTGTT
GTGCTTGACAAAGGATGGGAGATCAAATGGAATGTGGTAGAGAAATTCATTCCGATATGGTTTGAATCTGGGGAGGCGGAAGGAATGGAGGAGATCCTTACCAAG
CTGAACGAAGCAGCTCGACTATAA
mRNA sequenceShow/hide mRNA sequence
ATAAAAGCTAGAGCATTGCACATATAGGCGCCGGATCGCGAACTCCGGAGTGAACTATGGCGGTAGCGCGAAACAGGGTTCTGGCATTGGCCAAAGGCGGTTCCT
CCAGGATTCCGCTACGGTTACAGGAAGCTCATTATCGATGTATTTGCCGGAGATTTGTTTCTACTGATCCGTCGAATTCGATTTTGAATCCTCTGGTTCTCAGGT
TGATTCAGGAGCCAAGTTCGTCTGTGAAATCCGTGCTTGATTCGCCGGAAAATGATTTTCTTGGCAGCTCGCGACTTTCCTGGAAAGCTCTTGTTACGTCTCTTA
TATCTTCCTCGTCGCCTAAGAAGGCTCAGCTGGCTTTGGAATGGAGATTGGAGAAAATGAACAAAGAAAACGAGAGGGATCCTGACTTTTACATCGACCTAATAC
GTCTTTGTGGAGAGCTTCAGAATGTCCCTCTTGCAATGCGTGTCTTCACAGCTATGGAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAG
AGGTTTGTATATCTTCGCATAATATGATAACTGCCTTCAGCATGTTTGAAATAATGAAAAATTCTGAAAGTTTTAAACCCAATGCTGACACTTTCTTCTATTTCA
TTTCGGCATTCGCCAAACTGCGCGATGTAAATTCCATGGAAGCATGGTATTCAGCCAAAAGAGCGTTTGAATTCTCTGCTGATCTTCGAACCTATGAAGCTCTTA
TACATGGTAGTGTGAATTCAAAGTGCTTTGACTTTGCTGTTAGATGTTTTGATGAAATGATGTTATCTGGCATTGTGCCCAACGCAATCATATTGGATAATATGC
TTGAAGGGTTCTGTAAAAGGAAAGATTTGGATGAACTCAAGAAGTTCTTAACTGTTGTGCTTGACAAAGGATGGGAGATCAAATGGAATGTGGTAGAGAAATTCA
TTCCGATATGGTTTGAATCTGGGGAGGCGGAAGGAATGGAGGAGATCCTTACCAAGCTGAACGAAGCAGCTCGACTATAAAGAAGAGGATATTCAAGAATAAGTA
TGTTCCGGAGTTTAGCAGCTTTAAATAGAGTAAATATTCTATGGGAGTTCATTTTTCTTTCATTTTCTTCTTCTGGCCTGAGAGAGGAAAGAAAATTGAATTCGA
TTCTCAATAGCATATCGTCATAAAGAAATGGTAGAATGATAACAACGTGTGTGCCCCATGTTCAAACGATTCGATGGAACTCTTTAAACATGGCTTGCCATTTGA
ATGGGCAGATGGGCTTGCCACTTGAATGCCATTTGAATGGACTAGACTTATTTATTGACAGCAGTAAAGGCAAATATTTGCACACATT
Protein sequenceShow/hide protein sequence
MAVARNRVLALAKGGSSRIPLRLQEAHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENDFLGSSRLSWKALVTSLISSSSPKKAQLALEWRLEK
MNKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESFKPNADTFFYFISAFAKLRDVNSMEAWYSA
KRAFEFSADLRTYEALIHGSVNSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEIKWNVVEKFIPIWFESGEAEGMEEILTK
LNEAARL