; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh09G007980 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh09G007980
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionATPase_AAA_core domain-containing protein
Genome locationCma_Chr09:3892640..3896470
RNA-Seq ExpressionCmaCh09G007980
SyntenyCmaCh09G007980
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsIPR004582 - Checkpoint protein Rad17/Rad24
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591896.1 hypothetical protein SDJN03_14242, partial [Cucurbita argyrosperma subsp. sororia]6.3e-4747.16Show/hide
Query:  MRRKLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKK------VSLVSKEMI--------------------
        MRRKLAPLRSLNGC+EV AVKNRRRMESI RRNN+GEDEE CGS NKKKRKSK KMTPQSRSSKK      ++L  K+++                    
Subjt:  MRRKLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKK------VSLVSKEMI--------------------

Query:  -----------------------------------------------------------------------SLKNIVLITGSSGFSVSASVIQSGAVLEQ
                                                                               SLKNI+LITGSSGF  SASVIQSGAVLEQ
Subjt:  -----------------------------------------------------------------------SLKNIVLITGSSGFSVSASVIQSGAVLEQ

Query:  MIGEALQSHPLKW-------------------------------SVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIKEDVDIIF
        MIGEALQSH LKW                               S+K   GS+NNFIGKCCSLQEST AKCLATKVIELIPLSD+DSKDYIK  V ++F
Subjt:  MIGEALQSHPLKW-------------------------------SVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIKEDVDIIF

XP_011653805.1 uncharacterized protein LOC101216488 isoform X2 [Cucumis sativus]3.3e-4048.36Show/hide
Query:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------
        K  P  ++  C  + +VK       +    N  + ++F G    +K+ + G  + QS S  +      E   LKN++L+TGSSG                
Subjt:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------

Query:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------
          F  SASVI+SGAVL+QMIGEALQSH LKWSVK  QG RNNFI KC SLQEST+A CLA++V ELIPLSDDDSKDY+K                     
Subjt:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------

Query:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP
            EDVDIIFLED GF+SAIQEIA+TGKGPIILTSN+S+ VLP
Subjt:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP

XP_031740589.1 uncharacterized protein LOC101216488 isoform X1 [Cucumis sativus]3.3e-4048.36Show/hide
Query:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------
        K  P  ++  C  + +VK       +    N  + ++F G    +K+ + G  + QS S  +      E   LKN++L+TGSSG                
Subjt:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------

Query:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------
          F  SASVI+SGAVL+QMIGEALQSH LKWSVK  QG RNNFI KC SLQEST+A CLA++V ELIPLSDDDSKDY+K                     
Subjt:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------

Query:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP
            EDVDIIFLED GF+SAIQEIA+TGKGPIILTSN+S+ VLP
Subjt:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP

XP_038898740.1 uncharacterized protein LOC120086264 isoform X1 [Benincasa hispida]3.9e-4149.59Show/hide
Query:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------
        K  P  ++  C  + +VK       +    N   +++F G  NK +++       QS S  + S   K+  SL N++L+TGSSG                
Subjt:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------

Query:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------
          F  SASVI+SGAVL+QMIGEALQSH LKWSVK+ QGSRN+FI KC S QEST+AKCLA++VIELIPLSDDDSKDY K                     
Subjt:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------

Query:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP
            EDVDIIFLED GF+SAIQEIADTGKGPI+LTSNSS+ VLP
Subjt:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP

XP_038898741.1 uncharacterized protein LOC120086264 isoform X2 [Benincasa hispida]3.9e-4149.59Show/hide
Query:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------
        K  P  ++  C  + +VK       +    N   +++F G  NK +++       QS S  + S   K+  SL N++L+TGSSG                
Subjt:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------

Query:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------
          F  SASVI+SGAVL+QMIGEALQSH LKWSVK+ QGSRN+FI KC S QEST+AKCLA++VIELIPLSDDDSKDY K                     
Subjt:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------

Query:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP
            EDVDIIFLED GF+SAIQEIADTGKGPI+LTSNSS+ VLP
Subjt:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP

TrEMBL top hitse value%identityAlignment
A0A0A0L0K9 Uncharacterized protein1.6e-4048.36Show/hide
Query:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------
        K  P  ++  C  + +VK       +    N  + ++F G    +K+ + G  + QS S  +      E   LKN++L+TGSSG                
Subjt:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------

Query:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------
          F  SASVI+SGAVL+QMIGEALQSH LKWSVK  QG RNNFI KC SLQEST+A CLA++V ELIPLSDDDSKDY+K                     
Subjt:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------

Query:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP
            EDVDIIFLED GF+SAIQEIA+TGKGPIILTSN+S+ VLP
Subjt:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP

A0A1S3BAF7 uncharacterized protein LOC103487579 isoform X18.8e-3948.36Show/hide
Query:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------
        K  P  ++  C  + +VK       +    N    ++F G  NK +++ K     QS S  + S   ++   LKN++L+TGSSG                
Subjt:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------

Query:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------
          F  SAS I+SGAVL+QMIGEALQSH LKWSVK  QG RNNF+ K  SLQEST+AK LA++V ELIPLSDDDSKDYIK                     
Subjt:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------

Query:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP
            EDVDIIFLED GF+SAIQEIADTGKGPIILTSN+S+ VLP
Subjt:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP

A0A1S3BAH3 uncharacterized protein LOC103487579 isoform X28.8e-3948.36Show/hide
Query:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------
        K  P  ++  C  + +VK       +    N    ++F G  NK +++ K     QS S  + S   ++   LKN++L+TGSSG                
Subjt:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------

Query:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------
          F  SAS I+SGAVL+QMIGEALQSH LKWSVK  QG RNNF+ K  SLQEST+AK LA++V ELIPLSDDDSKDYIK                     
Subjt:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------

Query:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP
            EDVDIIFLED GF+SAIQEIADTGKGPIILTSN+S+ VLP
Subjt:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP

A0A5A7TUP8 Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein8.8e-3948.36Show/hide
Query:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------
        K  P  ++  C  + +VK       +    N    ++F G  NK +++ K     QS S  + S   ++   LKN++L+TGSSG                
Subjt:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSG----------------

Query:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------
          F  SAS I+SGAVL+QMIGEALQSH LKWSVK  QG RNNF+ K  SLQEST+AK LA++V ELIPLSDDDSKDYIK                     
Subjt:  --FSVSASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIK---------------------

Query:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP
            EDVDIIFLED GF+SAIQEIADTGKGPIILTSN+S+ VLP
Subjt:  ----EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP

A0A5D3D6T0 Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein1.4e-3644.57Show/hide
Query:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSGFSV-------------
        K  P  ++  C  + +VK       +    N    ++F G  NK +++ K     QS S  + S   ++   LKN++L+TGSSGF V             
Subjt:  KLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSGFSV-------------

Query:  ----------------------------SASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDY
                                    SAS I+SGAVL+QMIGEALQSH LKWSVK  QG RNNF+ K  SLQEST+AK LA++V ELIPLSDDDSKDY
Subjt:  ----------------------------SASVIQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDY

Query:  IK-------------------------EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP
        IK                         EDVDIIFLED GF+SAIQEIADTGKGPIILTSN+S+ VLP
Subjt:  IK-------------------------EDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G77620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein9.4e-0929.63Show/hide
Query:  GCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSGFSVSASV------------------
        G TE + V N    +   R   F  +++F  S   K + +    +     S+K    S    S KN++LI G +G   SA++                  
Subjt:  GCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSGFSVSASV------------------

Query:  IQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPL--SDDDSKD----YIKEDVDIIFLEDPGFVSAIQEIADTG
         +SG V+ Q  GEAL+S+ L  S+     S  +  G                 V+E++P+    +D  +     + EDVDI F ED G VSAIQ+IA   
Subjt:  IQSGAVLEQMIGEALQSHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPL--SDDDSKD----YIKEDVDIIFLEDPGFVSAIQEIADTG

Query:  KGPIILTSNSSNSVLP
        KGP++LT+N  N  LP
Subjt:  KGPIILTSNSSNSVLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCGGAAGTTGGCGCCACTGAGATCGTTAAACGGTTGCACAGAAGTGTTGGCCGTCAAGAACAGGAGGAGAATGGAGTCGATCCCGAGAAGGAACAATTTCGGTGA
GGATGAGGAATTCTGCGGGAGTTGGAACAAGAAGAAAAGGAAGTCGAAGGGGAAGATGACGCCTCAGTCGAGAAGTTCGAAGAAGGTATCTTTGGTGTCTAAAGAGATGA
TAAGCCTGAAGAATATTGTCCTCATCACGGGGTCATCTGGGTTCAGTGTCAGTGCATCTGTCATTCAATCGGGAGCTGTTCTCGAGCAGATGATTGGAGAGGCTTTACAA
TCTCATCCGCTAAAATGGTCAGTAAAACATTTCCAGGGGTCGAGGAACAATTTTATTGGGAAGTGTTGTTCTCTTCAAGAGAGTACATCAGCCAAATGTTTAGCGACTAA
GGTGATTGAACTCATCCCTTTATCAGACGATGATTCTAAAGATTACATTAAAGAGGACGTTGATATCATTTTTCTTGAGGATCCTGGTTTTGTTTCTGCAATTCAAGAGA
TTGCTGACACAGGAAAGGGACCCATAATTTTGACAAGCAATAGTAGCAATTCTGTTCTCCCTAGTACTTTTGGATAG
mRNA sequenceShow/hide mRNA sequence
AATTTAACTTCCCTTTCCCCATCCGAGGTTCCTGCTGTACTCCGGATCACGTTTCGTTACTAACAATGCTTTAGCTCACTCTCAGAGATTCTCGACCCTAGCACCCACAT
TTCAGTAATCAGATCACTGACAATTAGGCGTAAATTCATGGACTGACCGGCTGAACAATCGGGGAATGCGGCGGAAGTTGGCGCCACTGAGATCGTTAAACGGTTGCACA
GAAGTGTTGGCCGTCAAGAACAGGAGGAGAATGGAGTCGATCCCGAGAAGGAACAATTTCGGTGAGGATGAGGAATTCTGCGGGAGTTGGAACAAGAAGAAAAGGAAGTC
GAAGGGGAAGATGACGCCTCAGTCGAGAAGTTCGAAGAAGGTATCTTTGGTGTCTAAAGAGATGATAAGCCTGAAGAATATTGTCCTCATCACGGGGTCATCTGGGTTCA
GTGTCAGTGCATCTGTCATTCAATCGGGAGCTGTTCTCGAGCAGATGATTGGAGAGGCTTTACAATCTCATCCGCTAAAATGGTCAGTAAAACATTTCCAGGGGTCGAGG
AACAATTTTATTGGGAAGTGTTGTTCTCTTCAAGAGAGTACATCAGCCAAATGTTTAGCGACTAAGGTGATTGAACTCATCCCTTTATCAGACGATGATTCTAAAGATTA
CATTAAAGAGGACGTTGATATCATTTTTCTTGAGGATCCTGGTTTTGTTTCTGCAATTCAAGAGATTGCTGACACAGGAAAGGGACCCATAATTTTGACAAGCAATAGTA
GCAATTCTGTTCTCCCTAGTACTTTTGGATAG
Protein sequenceShow/hide protein sequence
MRRKLAPLRSLNGCTEVLAVKNRRRMESIPRRNNFGEDEEFCGSWNKKKRKSKGKMTPQSRSSKKVSLVSKEMISLKNIVLITGSSGFSVSASVIQSGAVLEQMIGEALQ
SHPLKWSVKHFQGSRNNFIGKCCSLQESTSAKCLATKVIELIPLSDDDSKDYIKEDVDIIFLEDPGFVSAIQEIADTGKGPIILTSNSSNSVLPSTFG