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CmaCh09G010060 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh09G010060
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionPre-mRNA-splicing factor like
Genome locationCma_Chr09:5133774..5136761
RNA-Seq ExpressionCmaCh09G010060
SyntenyCmaCh09G010060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592094.1 hypothetical protein SDJN03_14440, partial [Cucurbita argyrosperma subsp. sororia]1.6e-7097.84Show/hide
Query:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
        MDPSSVHKAPP+EEDEWDTDGFVIPSLGIEEEETDQTKVSSP+VEIQ+PPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
Subjt:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE

Query:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
        NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
Subjt:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
XP_022936022.1 uncharacterized protein LOC111442743 [Cucurbita moschata]1.2e-7098.56Show/hide
Query:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
        MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSP+VEIQ+PPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
Subjt:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE

Query:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
        NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
Subjt:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
XP_022975858.1 uncharacterized protein LOC111476432 [Cucurbita maxima]1.9e-71100Show/hide
Query:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
        MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
Subjt:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE

Query:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
        NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
Subjt:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
XP_023536283.1 uncharacterized protein LOC111797504 [Cucurbita pepo subsp. pepo]7.1e-7199.28Show/hide
Query:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
        MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDL+PANRKHRLKQKLKEADRRTTTGRE
Subjt:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE

Query:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
        NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
Subjt:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
XP_038898121.1 uncharacterized protein LOC120085905 [Benincasa hispida]2.2e-6492.81Show/hide
Query:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
        MDPSSVHK PPVEEDEWDTDGFVIPSLGI  EET+QTK  SPKVEIQEPPPKVKEE TIYLGPHGAPPSQSKQDLNP NRK RLKQKLKEADRRTTTGRE
Subjt:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE

Query:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
        NKLENLRELVGGGKSSTNM KGSSRDWLDPHCHEAQFEK
Subjt:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
TrEMBL top hitse value%identityAlignment
A0A0A0K8B7 Uncharacterized protein3.4e-6390.65Show/hide
Query:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
        MDPSSV KAPP EEDEWDTDGFVIPSLGI  EE DQT+V SPKVEI+EPPPKVKEE TIYLGPHGAPPSQSKQDLNP NRK RLKQKLKEADRRTTTGRE
Subjt:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE

Query:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
        NKLENLRELVGGGKSSTNM KGSSRDWLDPHCHEA+FEK
Subjt:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
A0A1S3CJS1 uncharacterized protein LOC1035012433.8e-6289.93Show/hide
Query:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
        MDPSSV KAPP EEDEWDTDGFVIPSLGI  EETDQT+V SPKVEI+EPPPKVKEE TIYLGPHGAPPSQSKQDLNP NRK RLK KLKEADRRTT GRE
Subjt:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE

Query:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
        NKLENLRELVG GKSSTNMTKGSSRDWLDPHCHEA+FEK
Subjt:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
A0A6J1CE06 uncharacterized protein LOC1110103856.5e-6290.65Show/hide
Query:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
        MDPSSV K PPVEEDEWDTDGFVIPSLGI  EETDQTKV SP+VEI EPPPK KEE TIYLGPHGAPPSQSKQDLN  NRK RLKQKLKEADRRTTTGRE
Subjt:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE

Query:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
        NKLENLRELVGGGKSSTNM KGSSRDWLDPHCHEAQFEK
Subjt:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
A0A6J1F787 uncharacterized protein LOC1114427435.8e-7198.56Show/hide
Query:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
        MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSP+VEIQ+PPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
Subjt:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE

Query:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
        NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
Subjt:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
A0A6J1IKG2 uncharacterized protein LOC1114764329.0e-72100Show/hide
Query:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
        MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE
Subjt:  MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRE

Query:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
        NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
Subjt:  NKLENLRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55640.1 unknown protein1.3e-3361.31Show/hide
Query:  PPVEE-DEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEP-PPKVKEEMTIYLGPHGAPPSQSKQ-DLNPANRKHRLKQKLKEADRRTT-TGRENKLEN
        P VE+ DEWDTDGFVIPSL IEE++ +    S  +VE  +P  PK K E  IYLGPHGAPPSQ +    N ++RK R KQ LKEAD++ + +GRENK+ N
Subjt:  PPVEE-DEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEP-PPKVKEEMTIYLGPHGAPPSQSKQ-DLNPANRKHRLKQKLKEADRRTT-TGRENKLEN

Query:  LRELVGGG---KSSTNMTKGSSRDWLDPHCHEAQFEK
        LRELVGGG   +  TNM KG SRDWLDPHCHE+QFEK
Subjt:  LRELVGGG---KSSTNMTKGSSRDWLDPHCHEAQFEK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCGTCGTCTGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAAGAAGAGACAGAC
CAAACTAAAGTTAGCTCTCCAAAAGTAGAGATCCAAGAGCCTCCTCCAAAGGTTAAAGAAGAGATGACGATCTATCTTGGTCCACATGGCGCGCCACCATCACAG
TCAAAACAAGATTTGAACCCCGCCAATCGTAAACATAGGTTAAAGCAGAAATTGAAGGAAGCAGATCGGAGGACCACGACCGGACGGGAGAATAAGTTGGAGAAT
TTGAGAGAGCTTGTAGGTGGTGGAAAATCAAGCACCAATATGACAAAAGGGTCTTCAAGGGACTGGCTTGACCCACATTGCCATGAGGCTCAGTTTGAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
TTTCCTTTAAATTTGAAGTTTCTTCGGGAATCGCGTTGGGTCGTGGTGGGGTTGATCATTTTTTTCCCCTTCCTTTCTGGGCTTTAGCGCCCTGAGGCCACTGAA
ATCCATGCTCGTCGGTATTCAATGGACCCGTCGTCTGTGCACAAAGCTCCTCCAGTTGAAGAAGATGAGTGGGACACTGATGGGTTCGTGATTCCCAGCTTGGGA
ATAGAAGAAGAAGAGACAGACCAAACTAAAGTTAGCTCTCCAAAAGTAGAGATCCAAGAGCCTCCTCCAAAGGTTAAAGAAGAGATGACGATCTATCTTGGTCCA
CATGGCGCGCCACCATCACAGTCAAAACAAGATTTGAACCCCGCCAATCGTAAACATAGGTTAAAGCAGAAATTGAAGGAAGCAGATCGGAGGACCACGACCGGA
CGGGAGAATAAGTTGGAGAATTTGAGAGAGCTTGTAGGTGGTGGAAAATCAAGCACCAATATGACAAAAGGGTCTTCAAGGGACTGGCTTGACCCACATTGCCAT
GAGGCTCAGTTTGAGAAGTAATGCCCACAGAGATCAACTTAACAAAATTAGCATAGTTTTCAAGATAAAGATCTGATGGGTCATTTTGTCACGGTATTAACCGTC
CTTTCGAGACAAATAATACCTTCTCTCTATATTTTTGGAAACTTAATGCCCAGAGTTTAGAACTATAATAAGTTTTGTATTGGAGCTTCGATGGTATAATTCAAG
TAGTTGCTGTAAAAGCAGCATGTTTGGTGAAGCTAATCATTGAATGTTCTTAAACTTCCTAACAACAATGCCTCAATCTTACAAAATTGAATTACTCTAA
Protein sequenceShow/hide protein sequence
MDPSSVHKAPPVEEDEWDTDGFVIPSLGIEEEETDQTKVSSPKVEIQEPPPKVKEEMTIYLGPHGAPPSQSKQDLNPANRKHRLKQKLKEADRRTTTGRENKLEN
LRELVGGGKSSTNMTKGSSRDWLDPHCHEAQFEK