| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN78022.1 hypothetical protein VITISV_015518 [Vitis vinifera] | 4.7e-170 | 59.16 | Show/hide |
Query: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
+H GFRCLDP T++LYIT HAQFDETHFP +PSSQAQPL ++ ISNFLEP LHHID SPP+ SP HIP+S+SSPC+ICSDLVDESVQVDTSLAGS+LP
Subjt: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
Query: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
P S+ SIE D SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLL ALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NTNIV
Subjt: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
Query: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG-------TLVAY
GSKWVF KYLPDGSVER KARLVAKGYT VPGLDYTDTFSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLNGTL E V+MEQPPG T V
Subjt: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG-------TLVAY
Query: SDADWAGCPDTRRS----------TSGYS-----------------IYL----------GNN--------------------------------------
G R+ T G+S IYL GNN
Subjt: SDADWAGCPDTRRS----------TSGYS-----------------IYL----------GNN--------------------------------------
Query: -------------------------------------------------------------------------------------LISWSAKKQPTVSRS
+SWSAKKQPT SRS
Subjt: -------------------------------------------------------------------------------------LISWSAKKQPTVSRS
Query: SCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS
SCESEYRALA TAAELLW+THLLHDLKVPI QQPLLLCDNKSAIF SSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHLQVADIFTKS S
Subjt: SCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS
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| RVW33283.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 3.1e-166 | 59.43 | Show/hide |
Query: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
+H GFRCLDP T++LYIT HAQFDETHFP +PSSQAQPL ++ ISNFLEP LHHID SPP+++SP HIP+S+SSPC+ICSDLVDESVQVDTSLAGS+LP
Subjt: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
Query: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
P S+ SIE D SSLG+H MITRAKAGIFKTRHPANLG+LGSSGLLS+LLASTEPKGFKSAAKNPAW+ AMDEE++ALQQN TW LVPRP NTNIV
Subjt: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
Query: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG------------
GSKWVF KY PDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+ VTNKWPLRQLDVKNAFLNGTL E V+MEQPPG
Subjt: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG------------
Query: --------------------------------------------------------------------------------TLVAYSDADWAGC-------
+V AG
Subjt: --------------------------------------------------------------------------------TLVAYSDADWAGC-------
Query: ---------------PDTRRSTSGYSIYLGNN-------------------------------LISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHL
PD + + S +L ++SWSAKKQPTVSRSSCESEYRALA TAAELLW+ HL
Subjt: ---------------PDTRRSTSGYSIYLGNN-------------------------------LISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHL
Query: LHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHL
LHDLKVPI QQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHL
Subjt: LHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHL
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| RVW41798.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 2.4e-182 | 56.86 | Show/hide |
Query: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
+H GFRCLDP T++LYIT HAQFDETHFP +PSSQAQPL ++ ISNFLEP LHHID SPP+ SP HIP+S+SSPC+ICSDLVDESVQVDTSLAG +LP
Subjt: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
Query: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
P S+ SIE D SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLL ALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NTNIV
Subjt: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
Query: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG------------
GSKWVF KYLPDGSVER KARLVAKGYT VPGLDYTD FSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLNGTL E V+MEQPPG
Subjt: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------TLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFF
LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SWSAKKQPTVSRSSCESEYRALA TAAELLW+THLLHDLKVPI QQPLLLCDNKSAIFF
Subjt: ---------TLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFF
Query: SSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS
SSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHLQVADIFTKS S
Subjt: SSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS
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| RVW45095.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 3.8e-196 | 58.04 | Show/hide |
Query: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
+H GFRCLDP T++LYIT HAQFDETHFP +PSSQAQPL ++ ISNFLEP LHHID SPP+ SP HIP+S+SSPC+ICSDLVDESVQVDTSLAGS+LP
Subjt: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
Query: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
P S+ SIE D SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLLSALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LV RP NTNIV
Subjt: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
Query: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG------------
GSKWVF KY PDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKWPLRQLDV NAFLNGTL E V+MEQPPG
Subjt: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------TLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFF
LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SWSAKKQPTVSRSSCESEYRALA T AELLW+THLLHDLKVPI QQPLLLCDNKSAIF
Subjt: ---------TLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFF
Query: SSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRG
SSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHLQVADIFTKS+SRPLFEFFRSKLH+RSNPTLSLRG
Subjt: SSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRG
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| RVW96109.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.2e-165 | 45.85 | Show/hide |
Query: MTADPSILDQSKNYMGKDSVIVGNGASLPITHI-------------------------------------------------------------------
MT DPSILDQSKNYMGKDSVIVGNGASLPITH
Subjt: MTADPSILDQSKNYMGKDSVIVGNGASLPITHI-------------------------------------------------------------------
Query: --------------------------------------------------------GFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNF
GFRCLDP T++LYIT HAQFDETHFP IPSSQAQPL ++ ISNF
Subjt: --------------------------------------------------------GFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNF
Query: LEPHLHHIDSSP--PTTSSPHIPQSSSSPCDICSDLVDESVQVDTSLAGSTLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSS
LEP LHHID SP PT+ S HIP+S+SSPC+ICSDLVDESVQVDTSLAGS+ PP S+ SIE D SSLG+HPMITRAKAGIFKTRHPANLG+LGS
Subjt: LEPHLHHIDSSP--PTTSSPHIPQSSSSPCDICSDLVDESVQVDTSLAGSTLPPSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSS
Query: GLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKAT
GLLS LL STEPKGFKSAAKNP W+A MDEE++ALQQN GYTQVPGLDYTDTFS VVKAT
Subjt: GLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKAT
Query: TVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQP-------------------------------------------------------------
TVRVVLS+AVTNKWPLRQ DVKNAFLNGTL E V+MEQP
Subjt: TVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQP-------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------PGTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKK
P LVAYSDADWAGCPDTRRSTS YSIYLGNNL+SWSAKK
Subjt: ------------------------------------------------------------PGTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKK
Query: QPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKS
QPTVSRSSCESEYRALA TAAELLW+THLLHDLKVPI QQ LLLCDNKSAIF SSNPVSHKRAKHVELDYHFLRELV+AGKL TQYVPSHLQVADIFTKS
Subjt: QPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKS
Query: ISRPLFEFFRSKLHVRSNPTLS-LRGGVKDS
+SRPLFEFFRSKLH+RSNPTLS L GGVKD+
Subjt: ISRPLFEFFRSKLHVRSNPTLS-LRGGVKDS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9EEM3 Integrase catalytic domain-containing protein | 4.8e-189 | 56.62 | Show/hide |
Query: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSP--PTTSSPHIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
+H GFRCLDP T+++YIT HAQFDETHFP + +SQAQP+ ++ SNFLEP L D P P SPHIPQS S+PCDIC+D VDES+QV+ SL G +LP
Subjt: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSP--PTTSSPHIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
Query: PSTSNSTSIE--------PPVDFSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPR
PS + S+E PV + + +HPM+TRAKAGIFKTRHPANL +LGSSGLLSALLASTEPKGFKSAAKNPAW+AAMDEEI+ALQ N TW LVPR
Subjt: PSTSNSTSIE--------PPVDFSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPR
Query: PANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQP-------
PANTNIVGSKWVF KYLPDGS+ER KARLVAKGYTQVPGLDYTDTFSPV+KATTVRVVLS+AVTNKWPLRQLDVKNAFLNG+L E V+MEQP
Subjt: PANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQP-------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------------PGTLVAYSDADWA
PGTLVAYSDADWA
Subjt: ---------------------------------------------------------------------------------------PGTLVAYSDADWA
Query: GCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFL
GCPDTRRSTSGYSIYLG+NL+SWSAKKQPTVSRSSCESEYRALA TAAELLW+THLLHDLKVP+ QQPLLLCDNKSAIF SSNPVSHKRAKHVELDYHFL
Subjt: GCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFL
Query: RELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRGGVKDS
RELV+AGKLRTQYVPSHLQVADIFTKS+SR LFEFFRSKLHV SNPTLSLRGGV+D+
Subjt: RELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRGGVKDS
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| A0A438DCU0 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-166 | 59.43 | Show/hide |
Query: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
+H GFRCLDP T++LYIT HAQFDETHFP +PSSQAQPL ++ ISNFLEP LHHID SPP+++SP HIP+S+SSPC+ICSDLVDESVQVDTSLAGS+LP
Subjt: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
Query: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
P S+ SIE D SSLG+H MITRAKAGIFKTRHPANLG+LGSSGLLS+LLASTEPKGFKSAAKNPAW+ AMDEE++ALQQN TW LVPRP NTNIV
Subjt: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
Query: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG------------
GSKWVF KY PDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+ VTNKWPLRQLDVKNAFLNGTL E V+MEQPPG
Subjt: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG------------
Query: --------------------------------------------------------------------------------TLVAYSDADWAGC-------
+V AG
Subjt: --------------------------------------------------------------------------------TLVAYSDADWAGC-------
Query: ---------------PDTRRSTSGYSIYLGNN-------------------------------LISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHL
PD + + S +L ++SWSAKKQPTVSRSSCESEYRALA TAAELLW+ HL
Subjt: ---------------PDTRRSTSGYSIYLGNN-------------------------------LISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHL
Query: LHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHL
LHDLKVPI QQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHL
Subjt: LHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHL
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| A0A438E275 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-182 | 56.86 | Show/hide |
Query: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
+H GFRCLDP T++LYIT HAQFDETHFP +PSSQAQPL ++ ISNFLEP LHHID SPP+ SP HIP+S+SSPC+ICSDLVDESVQVDTSLAG +LP
Subjt: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
Query: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
P S+ SIE D SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLL ALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NTNIV
Subjt: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
Query: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG------------
GSKWVF KYLPDGSVER KARLVAKGYT VPGLDYTD FSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLNGTL E V+MEQPPG
Subjt: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------TLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFF
LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SWSAKKQPTVSRSSCESEYRALA TAAELLW+THLLHDLKVPI QQPLLLCDNKSAIFF
Subjt: ---------TLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFF
Query: SSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS
SSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHLQVADIFTKS S
Subjt: SSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS
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| A0A438EBA0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-196 | 58.04 | Show/hide |
Query: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
+H GFRCLDP T++LYIT HAQFDETHFP +PSSQAQPL ++ ISNFLEP LHHID SPP+ SP HIP+S+SSPC+ICSDLVDESVQVDTSLAGS+LP
Subjt: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
Query: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
P S+ SIE D SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLLSALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LV RP NTNIV
Subjt: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
Query: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG------------
GSKWVF KY PDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKWPLRQLDV NAFLNGTL E V+MEQPPG
Subjt: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------TLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFF
LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SWSAKKQPTVSRSSCESEYRALA T AELLW+THLLHDLKVPI QQPLLLCDNKSAIF
Subjt: ---------TLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFF
Query: SSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRG
SSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHLQVADIFTKS+SRPLFEFFRSKLH+RSNPTLSLRG
Subjt: SSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRG
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| A5AKX4 Integrase catalytic domain-containing protein | 2.3e-170 | 59.16 | Show/hide |
Query: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
+H GFRCLDP T++LYIT HAQFDETHFP +PSSQAQPL ++ ISNFLEP LHHID SPP+ SP HIP+S+SSPC+ICSDLVDESVQVDTSLAGS+LP
Subjt: THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLP
Query: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
P S+ SIE D SSLG+HPMITRAKAGIFKTRHPANLG+LGSSGLL ALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NTNIV
Subjt: PSTSNSTSIEPPVD-FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIV
Query: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG-------TLVAY
GSKWVF KYLPDGSVER KARLVAKGYT VPGLDYTDTFSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLNGTL E V+MEQPPG T V
Subjt: GSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG-------TLVAY
Query: SDADWAGCPDTRRS----------TSGYS-----------------IYL----------GNN--------------------------------------
G R+ T G+S IYL GNN
Subjt: SDADWAGCPDTRRS----------TSGYS-----------------IYL----------GNN--------------------------------------
Query: -------------------------------------------------------------------------------------LISWSAKKQPTVSRS
+SWSAKKQPT SRS
Subjt: -------------------------------------------------------------------------------------LISWSAKKQPTVSRS
Query: SCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS
SCESEYRALA TAAELLW+THLLHDLKVPI QQPLLLCDNKSAIF SSNPVSHKRAKHVELDYHFLRELV+AGKLRTQYVPSHLQVADIFTKS S
Subjt: SCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSIS
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.5e-33 | 23.28 | Show/hide |
Query: AWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVK
+W A++ E+ A + N+TWT+ RP N NIV S+WVF +KY G+ R+KARLVA+G+TQ +DY +TF+PV + ++ R +LS+ + + Q+DVK
Subjt: AWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVK
Query: NAFLNGTLIERVHMEQPPG---------------------------------------------------------------------------------
AFLNGTL E ++M P G
Subjt: NAFLNGTLIERVHMEQPPG---------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------TLVAYSDADWAGCPDTRRSTSGYSIYLGN-NLISWSAKKQPTVSRSSCESEYRALATT
++ Y D+DWAG R+ST+GY + + NLI W+ K+Q +V+ SS E+EY AL
Subjt: ------------------------------------------TLVAYSDADWAGCPDTRRSTSGYSIYLGN-NLISWSAKKQPTVSRSSCESEYRALATT
Query: AAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKL
E LW+ LL + + + + DN+ I ++NP HKRAKH+++ YHF RE V + +Y+P+ Q+ADIFTK + F R KL
Subjt: AAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-26 | 21.92 | Show/hide |
Query: EPKGFKSAAKNP---AWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS
EP+ K +P + AM EE+ +LQ+N T+ LV P + KWVF +K D + R+KARLV KG+ Q G+D+ + FSPVVK T++R +LS
Subjt: EPKGFKSAAKNP---AWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS
Query: IAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPGTLVA--------------------------------------------------------------
+A + + QLDVK AFL+G L E ++MEQP G VA
Subjt: IAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPGTLVA--------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------------YSDADWAGCPDTRRSTSGYSIYLGNNLISWSA
Y+DAD AG D R+S++GY ISW +
Subjt: --------------------------------------------------------------------YSDADWAGCPDTRRSTSGYSIYLGNNLISWSA
Query: KKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFT
K Q V+ S+ E+EY A T E++W+ L +L + ++ ++ CD++SAI S N + H R KH+++ YH++RE+V L+ + ++ AD+ T
Subjt: KKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFT
Query: KSISRPLFEFFRSKLHVRSN
K + R FE + + + SN
Subjt: KSISRPLFEFFRSKLHVRSN
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 4.3e-25 | 45.11 | Show/hide |
Query: MITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARL
M+TR+KAGI K +L + EPK A K+P W AM EE+ AL +N TW LVP P N NI+G KWVF K DG+++R KARL
Subjt: MITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARL
Query: VAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIA
VAKG+ Q G+ + +T+SPVV+ T+R +L++A
Subjt: VAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.3e-63 | 28.91 | Show/hide |
Query: FRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPH-LHHIDSSPPTTSSP-HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLPPSTS
FR +++ L + + F + P P T P + H + + PT SP + QS S+P S S TS + S+ P T
Subjt: FRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPH-LHHIDSSPPTTSSP-HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLPPSTS
Query: NSTSIEPPVDFSS---------LGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLV-PRPA
S I PP + L TH M TRAKAGI K +L + +L A +EP+ A K+ W AM EI A N TW LV P P+
Subjt: NSTSIEPPVDFSS---------LGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLV-PRPA
Query: NTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG-------
+ IVG +W+F KY DGS+ R+KARLVAKGY Q PGLDY +TFSPV+K+T++R+VL +AV WP+RQLDV NAFL GTL + V+M QPPG
Subjt: NTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG-------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------TLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNK
+L AYSDADWAG D ST+GY +YLG++ ISWS+KKQ V RSS E+EYR++A T++E+ W+ LL +L + +++ P++ CDN
Subjt: --------------TLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNK
Query: SAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNP
A + +NPV H R KH+ +DYHF+R V +G LR +V +H Q+AD TK +SR F+ F SK+ V P
Subjt: SAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.5e-62 | 29.52 | Show/hide |
Query: PSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSPH----IPQSSSSPCDICSDLVDESVQVDTSLAGSTLPPSTSNSTSIEPPV----------DFSSLG
P AQP T SN P L++ + + P+ +SP+ +PQS S I + TS++ P S+S ST PPV + +
Subjt: PSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSPH----IPQSSSSPCDICSDLVDESVQVDTSLAGSTLPPSTSNSTSIEPPV----------DFSSLG
Query: THPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLV-PRPANTNIVGSKWVFHIKYLPDGSVERF
TH M TRAK GI K + ++L A++EP+ A K+ W AM EI A N TW LV P P + IVG +W+F K+ DGS+ R+
Subjt: THPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLV-PRPANTNIVGSKWVFHIKYLPDGSVERF
Query: KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG-------------------------------
KARLVAKGY Q PGLDY +TFSPV+K+T++R+VL +AV WP+RQLDV NAFL GTL + V+M QPPG
Subjt: KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG-------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------------------------------TLVAYSDADW
+L AYSDADW
Subjt: ------------------------------------------------------------------------------------------TLVAYSDADW
Query: AGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHF
AG D ST+GY +YLG++ ISWS+KKQ V RSS E+EYR++A T++EL W+ LL +L + +S P++ CDN A + +NPV H R KH+ LDYHF
Subjt: AGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHF
Query: LRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNP
+R V +G LR +V +H Q+AD TK +SR F+ F K+ V P
Subjt: LRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNP
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 3.9e-42 | 25.16 | Show/hide |
Query: LSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTV
L + + EP + A + W AMD+EI A++ TW + P N +G KWV+ IKY DG++ER+KARLVAKGYTQ G+D+ +TFSPV K T+V
Subjt: LSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTV
Query: RVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG-------------------------------------------------------------
+++L+I+ + L QLD+ NAFLNG L E ++M+ PPG
Subjt: RVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG-------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------TLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSA
L +SDA + C DTRRST+GY ++LG +LISW +
Subjt: ----------------------------------------------------------------TLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSA
Query: KKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRE
KKQ VS+SS E+EYRAL+ E++W+ +L++P+S+ LL CDN +AI ++N V H+R KH+E D H +RE
Subjt: KKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRE
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 4.2e-20 | 56.79 | Show/hide |
Query: FLNGTLIERVHMEQPPGTLV-AYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLW
++ GT+ +++ + V A+ D+DWAGC TRRST+G+ +LG N+ISWSAK+QPTVSRSS E+EYRALA TAAEL W
Subjt: FLNGTLIERVHMEQPPGTLV-AYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 3.0e-26 | 45.11 | Show/hide |
Query: MITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARL
M+TR+KAGI K +L + EPK A K+P W AM EE+ AL +N TW LVP P N NI+G KWVF K DG+++R KARL
Subjt: MITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARL
Query: VAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIA
VAKG+ Q G+ + +T+SPVV+ T+R +L++A
Subjt: VAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIA
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