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CmaCh09G011360 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh09G011360
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRING/U-box superfamily protein
Genome locationCma_Chr09:6433481..6433985
RNA-Seq ExpressionCmaCh09G011360
SyntenyCmaCh09G011360
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0042545 - cell wall modification (biological process)
GO:0045490 - pectin catabolic process (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
GO:0045330 - aspartyl esterase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7054219.1 unnamed protein product [Microthlaspi erraticum]5.0e-3298.59Show/hide
Query:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
        H LIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
Subjt:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR

KAF1876778.1 hypothetical protein Lal_00043708 [Lupinus albus]5.0e-3298.59Show/hide
Query:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
        +RLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
Subjt:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR

PPD70742.1 hypothetical protein GOBAR_DD32368 [Gossypium barbadense]6.5e-32100Show/hide
Query:  RLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
        RLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
Subjt:  RLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR

QCE14667.1 Uncharacterized protein family Ycf1 [Vigna unguiculata]2.5e-3195.77Show/hide
Query:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
        +R+IFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETV+SISGVGVRALRGPFPSTR
Subjt:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR

QHO28132.1 uncharacterized protein DS421_7g214040 [Arachis hypogaea]1.5e-3197.18Show/hide
Query:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
        +RLIFPKSSHRREGLAPRCR FATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
Subjt:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR

TrEMBL top hitse value%identityAlignment
A0A4D6NSC2 Uncharacterized protein family Ycf11.2e-3195.77Show/hide
Query:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
        +R+IFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETV+SISGVGVRALRGPFPSTR
Subjt:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR

A0A5N6L135 Uncharacterized protein1.2e-31100Show/hide
Query:  LIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
        LIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
Subjt:  LIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR

A0A6A5MXD5 Uncharacterized protein2.4e-3298.59Show/hide
Query:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
        +RLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
Subjt:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR

A0A6A5NLS3 Pectinesterase4.6e-3194.37Show/hide
Query:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
        +RLIFPKSSHRREGLAPRCRLF TWGCS+FQGLGCSPIK VRELGSERRETVRSISGVGVRALRGPFPSTR
Subjt:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR

A0A6D2L2K8 Uncharacterized protein2.4e-3298.59Show/hide
Query:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
        H LIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR
Subjt:  HRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTR

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING13.2e-0540.68Show/hide
Query:  PMSKIAIEMLRRVSIEEIDTN---EMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL
        P SK AIE L  V+I + + N     C +C++  E+G     QMPC H++H++C+ PWL
Subjt:  PMSKIAIEMLRRVSIEEIDTN---EMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL

Q6AVN2 E3 ubiquitin-protein ligase SIRP18.3e-0645.31Show/hide
Query:  DISGNPMIPMSKIAIEMLRRVSIEEIDTNEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL
        D S N   P  K A+E L  V IEE+ +   C +CL+ +E G+    QMPC H FH  CI PWL
Subjt:  DISGNPMIPMSKIAIEMLRRVSIEEIDTNEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL

Q8LPN7 E3 ubiquitin-protein ligase RING1-like2.4e-0542.37Show/hide
Query:  PMSKIAIEMLRRVSI-EEIDTNEM--CVICLEKIEKGAILLLQMPCLHVFHEECIKPWL
        P SK AI+ L  V + +++  +EM  C +C+++ E G+  + QMPC HVFH++C+ PWL
Subjt:  PMSKIAIEMLRRVSI-EEIDTNEM--CVICLEKIEKGAILLLQMPCLHVFHEECIKPWL

Q940T5 E3 ubiquitin-protein ligase RDUF24.9e-0646.88Show/hide
Query:  SGNPMIPMSKIAIEMLRRVSIEE--IDTNEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL
        SGNP  P SK AIE L RV I +  I +   C +C E  E       +MPC H+FH++CI PWL
Subjt:  SGNPMIPMSKIAIEMLRRVSIEE--IDTNEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL

Q9SNB6 E3 ubiquitin-protein ligase RDUF17.5e-0750Show/hide
Query:  SGNPMIPMSKIAIEMLRRVSIEEIDT--NEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL
        SGNP  P SK AIE L RV I +  T     C +C E  E G I   +MPC H+FH +CI PWL
Subjt:  SGNPMIPMSKIAIEMLRRVSIEEIDT--NEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL

Arabidopsis top hitse value%identityAlignment
AT1G55530.1 RING/U-box superfamily protein1.9e-0544.64Show/hide
Query:  PMSKIAIEMLRRVSIEEIDTNEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL
        P  K A+E L  V IEE      C +CL+  E G    L MPC H FH +C+ PWL
Subjt:  PMSKIAIEMLRRVSIEEIDTNEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL

AT3G10815.1 RING/U-box superfamily protein1.9e-0535.38Show/hide
Query:  PMSKIAIEMLRRVSIEE--IDTNEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWLFHRLIFP
        P S  AI  L+++ I +  +  +  C +C ++ E G+    +MPC H++H ECI PWL  R   P
Subjt:  PMSKIAIEMLRRVSIEE--IDTNEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWLFHRLIFP

AT3G19950.1 RING/U-box superfamily protein1.7e-0642.37Show/hide
Query:  PMSKIAIEMLRRVSI-EEIDTNEM--CVICLEKIEKGAILLLQMPCLHVFHEECIKPWL
        P SK AI+ L  V + +++  +EM  C +C+++ E G+  + QMPC HVFH++C+ PWL
Subjt:  PMSKIAIEMLRRVSI-EEIDTNEM--CVICLEKIEKGAILLLQMPCLHVFHEECIKPWL

AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein5.4e-0850Show/hide
Query:  SGNPMIPMSKIAIEMLRRVSIEEIDT--NEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL
        SGNP  P SK AIE L RV I +  T     C +C E  E G I   +MPC H+FH +CI PWL
Subjt:  SGNPMIPMSKIAIEMLRRVSIEEIDT--NEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL

AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein3.5e-0746.88Show/hide
Query:  SGNPMIPMSKIAIEMLRRVSIEE--IDTNEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL
        SGNP  P SK AIE L RV I +  I +   C +C E  E       +MPC H+FH++CI PWL
Subjt:  SGNPMIPMSKIAIEMLRRVSIEE--IDTNEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATTAGTGGAAACCCGATGATTCCTATGAGCAAAATCGCTATCGAGATGTTAAGAAGAGTAAGCATCGAAGAGATAGACACGAATGAAATGTGTGTAATT
TGCTTGGAAAAAATAGAAAAAGGTGCAATATTATTATTGCAAATGCCTTGTTTGCACGTGTTTCACGAGGAATGCATAAAACCGTGGCTCTTCCACAGGCTGATC
TTCCCCAAGAGCTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCATTAAA
GCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAACCCAATTT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATTAGTGGAAACCCGATGATTCCTATGAGCAAAATCGCTATCGAGATGTTAAGAAGAGTAAGCATCGAAGAGATAGACACGAATGAAATGTGTGTAATT
TGCTTGGAAAAAATAGAAAAAGGTGCAATATTATTATTGCAAATGCCTTGTTTGCACGTGTTTCACGAGGAATGCATAAAACCGTGGCTCTTCCACAGGCTGATC
TTCCCCAAGAGCTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCATTAAA
GCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAACCCAATTT
TAA
Protein sequenceShow/hide protein sequence
MDISGNPMIPMSKIAIEMLRRVSIEEIDTNEMCVICLEKIEKGAILLLQMPCLHVFHEECIKPWLFHRLIFPKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIK
AVRELGSERRETVRSISGVGVRALRGPFPSTRTQF