; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh09G011850 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh09G011850
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCytochrome b559 subunit alpha
Genome locationCma_Chr09:7519611..7525936
RNA-Seq ExpressionCmaCh09G011850
SyntenyCmaCh09G011850
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0005488 - binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AES69826.2 hypothetical protein MTR_3g035630 [Medicago truncatula]2.0e-4379.17Show/hide
Query:  FYGRSATPGYRRRPWGDLVVPTGWRRWG---------IPDEGTLREPPTPTTVHP---IFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPT
        FYGRSATPG RRRPWGDLVVPTGWRR G         I DE TL EPPTPTTVH    + ++ +SFSGMFRSS PLLRKSEPPVQVQDTIITAWTIRHPT
Subjt:  FYGRSATPGYRRRPWGDLVVPTGWRRWG---------IPDEGTLREPPTPTTVHP---IFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPT

Query:  RNRNDPIARAELYQLSYIPP
        RNRNDPIARAELYQLSYIPP
Subjt:  RNRNDPIARAELYQLSYIPP

CAA9893486.1 unnamed protein product [Spirodela intermedia]9.2e-4167.13Show/hide
Query:  YGRSATPGYRRRPWGDLVVPTGWRRWGI-----------------PDEGTLREPPTPTTVH----------PIFVSVESFSGMFRSSSPLLRKSEPPVQV
        YGRS TPG RRRPWGDLVVPTGWRRWG                   +EGTL EPPTPT VH          P ++ + SFSGMFRSSSPLLRKSEPPVQV
Subjt:  YGRSATPGYRRRPWGDLVVPTGWRRWGI-----------------PDEGTLREPPTPTTVH----------PIFVSVESFSGMFRSSSPLLRKSEPPVQV

Query:  QDTIITAWTIRHPTRNRNDPIARAELYQLSYIP-PSQLGHPGL
        QDTIITAWTIRHPTRNRNDPIARAELYQLSYIP P    H G+
Subjt:  QDTIITAWTIRHPTRNRNDPIARAELYQLSYIP-PSQLGHPGL

KAF3622520.1 30S ribosomal protein S12, chloroplastic [Capsicum annuum]5.2e-3648.33Show/hide
Query:  VLVPPFFLTMASLCEITPMRRKKKALRNPPGPTLDTLRSFFK-SPDLREKHEKKGSNGTIPPSPQNERGDLVVLGMYGFSRREEPRWSPPDRPDPTREVR
        +LVPPFFLT+ASLCEI PMRRKKKALR+PPG TLDTLRSFFK +P L    EK GSNG                                          
Subjt:  VLVPPFFLTMASLCEITPMRRKKKALRNPPGPTLDTLRSFFK-SPDLREKHEKKGSNGTIPPSPQNERGDLVVLGMYGFSRREEPRWSPPDRPDPTREVR

Query:  HANVPWMIHISGSGADEHIELSMWLRALTAQAQRHNYQGSLLFGCEAVSNQNTQQALALPIKEVIQPHLPIQLPCYDFTPITSPTFGIPLLAVKVPTLGM
                                                   GCEAVSNQNTQQALALP KEVIQPHLP++LPCYDFTP+T   FGIPLLAVKV T GM
Subjt:  HANVPWMIHISGSGADEHIELSMWLRALTAQAQRHNYQGSLLFGCEAVSNQNTQQALALPIKEVIQPHLPIQLPCYDFTPITSPTFGIPLLAVKVPTLGM

Query:  ANSHSVTGG
        A+SHSVTGG
Subjt:  ANSHSVTGG

RYR58988.1 hypothetical protein Ahy_A05g024840 [Arachis hypogaea]9.5e-3875.68Show/hide
Query:  FYGRSATPGYRRRPWGDLVVPTGWRRWGIPDEGTLREPPTPTTVHPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAEL
        FYGRSATPG RRRPWGDLVVPTGWRRW                       VESFSGMFRSS PLLRKSEPPVQVQ+TIITAWTIRHPTRNRNDPIARAEL
Subjt:  FYGRSATPGYRRRPWGDLVVPTGWRRWGIPDEGTLREPPTPTTVHPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAEL

Query:  YQLSYIPPSQL
        YQLSYIPPSQ+
Subjt:  YQLSYIPPSQL

TYI86976.1 hypothetical protein E1A91_D04G104800v1 [Gossypium mustelinum]4.9e-4242.11Show/hide
Query:  PIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQLGHPGLEPETSPVNIQLSVVLRSPSVLVPPFFLTM
        PIFVSVESFSGMFRS SPLLRKSEPPVQVQDTIITAWTIRHPT NRN+PI+RAELYQLSYIP                                      
Subjt:  PIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQLGHPGLEPETSPVNIQLSVVLRSPSVLVPPFFLTM

Query:  ASLCEITPMRRKKKALRNPPGPTLDTLRSFFKSPDLREKHEKKGSNGTIPPSPQNERGDLVVLGMYGFSRREEPRWSPPDRPDPTREVRHANVPWMIHIS
                  R K  +        + +R FF                                  Y F  R                       W I   
Subjt:  ASLCEITPMRRKKKALRNPPGPTLDTLRSFFKSPDLREKHEKKGSNGTIPPSPQNERGDLVVLGMYGFSRREEPRWSPPDRPDPTREVRHANVPWMIHIS

Query:  GSGADEHIELSMWLRALTAQAQRHNYQGSLLFGCEAVSNQNTQQALALPIKEVIQPHLPIQLPCYDFTPITSPTFGIPLLAVKVPTLGMANSHSVTGGVY
               ++L+   R L                   +SNQNTQQALA P KEVIQPHLP++LPCYDFTPITSP FGIPLL VKV T GMA+SHSVTG VY
Subjt:  GSGADEHIELSMWLRALTAQAQRHNYQGSLLFGCEAVSNQNTQQALALPIKEVIQPHLPIQLPCYDFTPITSPTFGIPLLAVKVPTLGMANSHSVTGGVY

Query:  KARE
        KARE
Subjt:  KARE

TrEMBL top hitse value%identityAlignment
A0A444ZBQ2 Uncharacterized protein2.1e-3062.71Show/hide
Query:  GYRRRPWGDLVVPTGWRRWG----------IPDEGTLREPPTPTTVH---PIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPI
        G RR  W D++V  GWRRWG          I  +  + E P+PTTVH    + ++  SFSGMFRSS PLLRKSEPPVQVQ+TIIT WTIRHPT N NDPI
Subjt:  GYRRRPWGDLVVPTGWRRWG----------IPDEGTLREPPTPTTVH---PIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPI

Query:  ARAELYQLSYIPPSQLGH
        ARAELYQLSYIPPSQ+ H
Subjt:  ARAELYQLSYIPPSQLGH

A0A445D768 Cytochrome b559 subunit alpha4.6e-3875.68Show/hide
Query:  FYGRSATPGYRRRPWGDLVVPTGWRRWGIPDEGTLREPPTPTTVHPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAEL
        FYGRSATPG RRRPWGDLVVPTGWRRW                       VESFSGMFRSS PLLRKSEPPVQVQ+TIITAWTIRHPTRNRNDPIARAEL
Subjt:  FYGRSATPGYRRRPWGDLVVPTGWRRWGIPDEGTLREPPTPTTVHPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAEL

Query:  YQLSYIPPSQL
        YQLSYIPPSQ+
Subjt:  YQLSYIPPSQL

A0A5D2VCA4 Uncharacterized protein2.4e-4242.11Show/hide
Query:  PIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQLGHPGLEPETSPVNIQLSVVLRSPSVLVPPFFLTM
        PIFVSVESFSGMFRS SPLLRKSEPPVQVQDTIITAWTIRHPT NRN+PI+RAELYQLSYIP                                      
Subjt:  PIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQLGHPGLEPETSPVNIQLSVVLRSPSVLVPPFFLTM

Query:  ASLCEITPMRRKKKALRNPPGPTLDTLRSFFKSPDLREKHEKKGSNGTIPPSPQNERGDLVVLGMYGFSRREEPRWSPPDRPDPTREVRHANVPWMIHIS
                  R K  +        + +R FF                                  Y F  R                       W I   
Subjt:  ASLCEITPMRRKKKALRNPPGPTLDTLRSFFKSPDLREKHEKKGSNGTIPPSPQNERGDLVVLGMYGFSRREEPRWSPPDRPDPTREVRHANVPWMIHIS

Query:  GSGADEHIELSMWLRALTAQAQRHNYQGSLLFGCEAVSNQNTQQALALPIKEVIQPHLPIQLPCYDFTPITSPTFGIPLLAVKVPTLGMANSHSVTGGVY
               ++L+   R L                   +SNQNTQQALA P KEVIQPHLP++LPCYDFTPITSP FGIPLL VKV T GMA+SHSVTG VY
Subjt:  GSGADEHIELSMWLRALTAQAQRHNYQGSLLFGCEAVSNQNTQQALALPIKEVIQPHLPIQLPCYDFTPITSPTFGIPLLAVKVPTLGMANSHSVTGGVY

Query:  KARE
        KARE
Subjt:  KARE

A0A5N6P537 Uncharacterized protein9.9e-3387.8Show/hide
Query:  QGSLLFGCEAVSNQNTQQALALPIKEVIQPHLPIQLPCYDFTPITSPTFGIPLLAVKVPTLGMANSHSVTGGVYKARERIHR
        + SLLFGCEAVSNQNTQQALALP KEVIQPHLP++LPCYDFTP+TSP FGIPLLAVKV T GMA+SHSVTGGVYKARERIHR
Subjt:  QGSLLFGCEAVSNQNTQQALALPIKEVIQPHLPIQLPCYDFTPITSPTFGIPLLAVKVPTLGMANSHSVTGGVYKARERIHR

G7J0Z8 Uncharacterized protein9.6e-4479.17Show/hide
Query:  FYGRSATPGYRRRPWGDLVVPTGWRRWG---------IPDEGTLREPPTPTTVHP---IFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPT
        FYGRSATPG RRRPWGDLVVPTGWRR G         I DE TL EPPTPTTVH    + ++ +SFSGMFRSS PLLRKSEPPVQVQDTIITAWTIRHPT
Subjt:  FYGRSATPGYRRRPWGDLVVPTGWRRWG---------IPDEGTLREPPTPTTVHP---IFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPT

Query:  RNRNDPIARAELYQLSYIPP
        RNRNDPIARAELYQLSYIPP
Subjt:  RNRNDPIARAELYQLSYIPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGTAATCCGAAGAAGGCTTCTATGCAGCAGCCGGACCGGCGAAGGAAGAGAGTATGAGTTTCCGTGTAGCCACCGGGTCGGTGAAAAGCGTGTAAAGAAGACATA
CATCCGTATTAATAAAAACAGATTTATCTTGACTTCATTTTATCGGGCATGTTTGATCATGTCTTCGGTTGGATGGCGCTCCCGAGACTACTTTGATGTTCAGATTCTTG
TGGTTCCGGAGAATCCAGCTACAGGAGAACCAGGAACGGAGAGCTTTCCCCCCTTTTCCGCCCGCCTCTTTGGTCTTAAGAATGCTGGGTTCTATGGTCGGTCCGCGACC
CCTGGATACCGAAGGCGTCCTTGGGGTGATCTCGTAGTTCCTACGGGGTGGAGACGATGGGGGATCCCAGATGAGGGAACCCTAAGAGAGCCGCCGACTCCAACTACCGT
CCATCCCATCTTTGTCTCAGTAGAGTCTTTCAGTGGCATGTTTCGGTCCTCTTCCCCATTACTTAGAAAAAGTGAGCCACCGGTTCAGGTACAAGATACTATCATTACCG
CCTGGACAATTAGACATCCAACCCGTAATCGCAACGACCCAATTGCAAGAGCGGAGCTCTACCAACTGAGCTATATCCCCCCGAGCCAACTGGGCCATCCTGGACTTGAA
CCAGAGACCTCGCCCGTGAACATACAACTCTCCGTTGTACTGCGCTCTCCAAGTGTGCTTGTTCCCCCCTTCTTCCTTACCATGGCAAGTCTTTGTGAAATAACTCCGAT
GAGAAGAAAAAAGAAGGCGTTAAGAAACCCTCCTGGCCCAACCCTAGACACTCTAAGATCCTTTTTCAAATCTCCTGACCTCCGGGAAAAGCATGAAAAAAAAGGCTCGA
ATGGTACGATCCCTCCGTCACCCCAGAATGAAAGGGGCGATCTCGTAGTTCTTGGGATGTATGGATTCTCGAGAAGAGAGGAGCCGAGGTGGTCCCCCCCGGACCGCCCG
GATCCCACGAGAGAAGTACGCCATGCTAATGTGCCTTGGATGATCCACATCTCAGGGTCAGGCGCTGATGAGCACATTGAACTATCCATGTGGCTGAGAGCCCTCACAGC
CCAGGCACAACGACACAATTATCAGGGCTCGCTTCTTTTTGGGTGTGAAGCAGTGTCAAACCAAAATACCCAACAAGCATTAGCTCTCCCTATAAAGGAGGTGATCCAGC
CGCACCTTCCAATACAGCTACCTTGTTACGACTTCACTCCAATCACTAGCCCTACCTTCGGCATCCCCCTCCTTGCGGTTAAGGTACCGACTTTGGGCATGGCCAACTCC
CATAGTGTGACGGGTGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCTTCTTTTGTTCATGAGATCACTTATTGTGTGCATTATTTGGGTTGCTCGATTATTATTTTG
CATTTTTTTTACCATTGATCCATCATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATGTAATCCGAAGAAGGCTTCTATGCAGCAGCCGGACCGGCGAAGGAAGAGAGTATGAGTTTCCGTGTAGCCACCGGGTCGGTGAAAAGCGTGTAAAGAAGACATA
CATCCGTATTAATAAAAACAGATTTATCTTGACTTCATTTTATCGGGCATGTTTGATCATGTCTTCGGTTGGATGGCGCTCCCGAGACTACTTTGATGTTCAGATTCTTG
TGGTTCCGGAGAATCCAGCTACAGGAGAACCAGGAACGGAGAGCTTTCCCCCCTTTTCCGCCCGCCTCTTTGGTCTTAAGAATGCTGGGTTCTATGGTCGGTCCGCGACC
CCTGGATACCGAAGGCGTCCTTGGGGTGATCTCGTAGTTCCTACGGGGTGGAGACGATGGGGGATCCCAGATGAGGGAACCCTAAGAGAGCCGCCGACTCCAACTACCGT
CCATCCCATCTTTGTCTCAGTAGAGTCTTTCAGTGGCATGTTTCGGTCCTCTTCCCCATTACTTAGAAAAAGTGAGCCACCGGTTCAGGTACAAGATACTATCATTACCG
CCTGGACAATTAGACATCCAACCCGTAATCGCAACGACCCAATTGCAAGAGCGGAGCTCTACCAACTGAGCTATATCCCCCCGAGCCAACTGGGCCATCCTGGACTTGAA
CCAGAGACCTCGCCCGTGAACATACAACTCTCCGTTGTACTGCGCTCTCCAAGTGTGCTTGTTCCCCCCTTCTTCCTTACCATGGCAAGTCTTTGTGAAATAACTCCGAT
GAGAAGAAAAAAGAAGGCGTTAAGAAACCCTCCTGGCCCAACCCTAGACACTCTAAGATCCTTTTTCAAATCTCCTGACCTCCGGGAAAAGCATGAAAAAAAAGGCTCGA
ATGGTACGATCCCTCCGTCACCCCAGAATGAAAGGGGCGATCTCGTAGTTCTTGGGATGTATGGATTCTCGAGAAGAGAGGAGCCGAGGTGGTCCCCCCCGGACCGCCCG
GATCCCACGAGAGAAGTACGCCATGCTAATGTGCCTTGGATGATCCACATCTCAGGGTCAGGCGCTGATGAGCACATTGAACTATCCATGTGGCTGAGAGCCCTCACAGC
CCAGGCACAACGACACAATTATCAGGGCTCGCTTCTTTTTGGGTGTGAAGCAGTGTCAAACCAAAATACCCAACAAGCATTAGCTCTCCCTATAAAGGAGGTGATCCAGC
CGCACCTTCCAATACAGCTACCTTGTTACGACTTCACTCCAATCACTAGCCCTACCTTCGGCATCCCCCTCCTTGCGGTTAAGGTACCGACTTTGGGCATGGCCAACTCC
CATAGTGTGACGGGTGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCTTCTTTTGTTCATGAGATCACTTATTGTGTGCATTATTTGGGTTGCTCGATTATTATTTTG
CATTTTTTTTACCATTGATCCATCATATTAACTATTACGGTTGTACTTTTTCAACCGTGCAGTATCGTGATCTTAACATGCTTACGACCAGCCTTAATGGAAACTCAAGT
CCCATATAGATTTTTCGCCCGACTTTGTGGCTTTGTTGAACCTTAGCGAGGTTTGTCTTTGTCAACCAAACATCACTTATGCATAATTCAAATTTTAAGTACATTCCTAC
ATTATTTCCTCTCTACCTTCATTCCCATTGTTTCTTACATTGTTCTATGTGATATAGATGGTCGTTGTTCGTTGTGTTTCTAGGTTAAGTATTCTCTATAGTTGGTATAA
GTTACCTGATCTCTTGTAATTTTTAGAATACTGTGGTTGCAGTTATCTAATCTTCGCATAAAAAATGAACCCTTGAGATTATTAGTGAGTTTCTTTGTGTTGTGAGTAGT
CTGTGAGTGTACAAGTTTTGTGTCGAAAAAACTTGTTTGGCATCACTGAAATATTGCCAACAAAATGGGTGATCTCCAAGTCGTTGGAGAATTCAAGAAACTCAACACCA
ACAACGGTTAATCGTAAGCAACGTGATGATGTAACCGTCCAAACTCACAGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTTCGAGCTTTCTCGGTTTTTAAAACGT
TTCTTCTAGGGAGAGGTTTTCACACACTTATAAAAAATGTTTAATTCCTCTCTCCAACCGATGTGAGATCTCACAATCCACCCCTCTTTCGGGGCCCAACGTCCTTGCTA
GCACTTGTTTTTCTCTTTAATCAATGTGGGATCTCACACATGATATCTTATCTACAAGGAAGACCTTTGAGAGGTCATTGGAGAAGCAAAATTACACTTCCAAATGAGGA
TGCAAATGACGCCTTAAGCAAATGTAGGATTAAAGCAGACAAAAATGTATGCCTTGAAAACCATGATCGAAGAAGAAATTATTCTACCAAATGTCTTGTAATCTCTTTTC
TATTGGTCGTATAAATAGTTCAGTTGGTCTTATTTATAACGATTTCATTTTGAACCCGTAACAAGTCTATAATAATTTTTAA
Protein sequenceShow/hide protein sequence
MHVIRRRLLCSSRTGEGREYEFPCSHRVGEKRVKKTYIRINKNRFILTSFYRACLIMSSVGWRSRDYFDVQILVVPENPATGEPGTESFPPFSARLFGLKNAGFYGRSAT
PGYRRRPWGDLVVPTGWRRWGIPDEGTLREPPTPTTVHPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQLGHPGLE
PETSPVNIQLSVVLRSPSVLVPPFFLTMASLCEITPMRRKKKALRNPPGPTLDTLRSFFKSPDLREKHEKKGSNGTIPPSPQNERGDLVVLGMYGFSRREEPRWSPPDRP
DPTREVRHANVPWMIHISGSGADEHIELSMWLRALTAQAQRHNYQGSLLFGCEAVSNQNTQQALALPIKEVIQPHLPIQLPCYDFTPITSPTFGIPLLAVKVPTLGMANS
HSVTGGVYKARERIHRLLLFMRSLIVCIIWVARLLFCIFFTIDPSY