CuGenDBv2

Gene ID	CmaCh09G012660
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Chloroplast envelope membrane protein
Genome location	Cma_Chr09:8647003..8647981
RNA-Seq Expression	CmaCh09G012660
Synteny	CmaCh09G012660
Gene Ontology terms	GO:1902600 - proton transmembrane transport (biological process) GO:0009706 - chloroplast inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR004282 - Chloroplast envelope membrane protein, CemA

Homology

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GenBank top hits

e value

%identity

Alignment

ATL59414.1 envelope membrane protein [Glionnetia sericea]

6.5e-23

89.83

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELM+GSVYKDFGF HNDQIISGLV TFPVILDTIFKYWIFRYLNCVSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

QTJ25978.1 CemA [Impatiens stenosepala]

2.5e-22

89.83

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIGSVYKDFGF HNDQIISGLV TFPVILDTI KYWIFRYLNCVSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

YP_009751750.1 envelope membrane carbon uptake protein [Herpetospermum pedunculosum]

2.5e-22

91.53

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIGSVYKDFGFSHNDQIISGLV TFPVILDTIFKYWIFRYLN VSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

YP_009752339.1 envelope membrane carbon uptake protein [Bryonia marmorata]

2.5e-22

91.53

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIGSVYKDFGFSHNDQIISGLV TFPVILDTIFKYWIFRYLN VSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

YP_009939423.1 chloroplast envelope membrane protein [Comarum salesovianum]

2.5e-22

91.53

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIGSVYKDFGFSHNDQIISGLV TFPVILDTIFKYWIFRYLN VSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LFN5 Chloroplast envelope membrane protein

1.2e-22

91.53

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIGSVYKDFGFSHNDQIISGLV TFPVILDTIFKYWIFRYLN VSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

A0A410HFF9 envelope membrane protein, chloroplastic

1.2e-22

91.53

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIGSVYKDFGFSHNDQIISGLV TFPVILDTIFKYWIFRYLN VSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

A0A6F8FCN3 envelope membrane protein, chloroplastic

3.1e-23

89.83

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELM+GSVYKDFGF HNDQIISGLV TFPVILDTIFKYWIFRYLNCVSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

A0A7H0R146 envelope membrane protein, chloroplastic

1.2e-22

91.53

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIGSVYKDFGFSHNDQIISGLV TFPVILDTIFKYWIFRYLN VSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

D3WBW2 envelope membrane protein, chloroplastic

1.2e-22

91.53

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIGSVYKDFGFSHNDQIISGLV TFPVILDTIFKYWIFRYLN VSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

SwissProt top hits

e value

%identity

Alignment

A0ZZ47 Chloroplast envelope membrane protein

9.4e-25

88.14

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIGS+YKDFGF+HNDQIISGLV TFPVILDTIFKYWIFRYLN VSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

B1NWG2 Chloroplast envelope membrane protein

7.2e-25

89.83

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIGSVYKDFGF+HNDQIISGLV TFPVILDTIFKYWIFRYLN VSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

Q09X05 Chloroplast envelope membrane protein

2.1e-24

86.44

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIGS+YKDFGF+HNDQIISG+V TFPVILDTIFKYWIFRYLN VSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

Q2L922 Chloroplast envelope membrane protein

9.4e-25

88.14

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIGS+YKDFGF+HNDQIISGLV TFPVILDTIFKYWIFRYLN VSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

Q2QD77 Chloroplast envelope membrane protein

1.6e-24

89.83

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIGSVYKDFGFSHNDQIIS LV TFPVILDTIFKYWIFRYLN VSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

Arabidopsis top hits

e value

%identity

Alignment

AT4G31040.1 CemA-like proton extrusion protein-related

1.4e-04

29.85

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Query:  FLSVRIPNV--RFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSP
        FL + I ++   +HS  GWE ++  + + +G       I+  +   PVI+D   K W+F++L  +SP
Subjt:  FLSVRIPNV--RFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSP

ATCG00530.1 CemA-like proton extrusion protein-related

1.4e-23

81.36

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Query:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL
        + FHS HGWELMIG +YKDFGF+H +QI+SGLV TFPVILDTIFKYWIFRYLN VSPSL
Subjt:  VRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSL

Sequences

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CDS sequence

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ATGCCCGAATCAAAAGGCAGGGATTCCTGGGTTCGGGCCGAAGAAGCAATGTCACTCGATCATTATCAAATCGACTGCAACTTTTTTCTGTCCGTGAGGATCCCAAATGT
ACGATTCCATTCGCTCCATGGTTGGGAACTAATGATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTATATCCGGTCTTGTTTTCACTTTTCCGG
TCATTCTGGACACAATTTTCAAATATTGGATCTTCCGTTATTTAAATTGTGTATCTCCGTCACTACAG

mRNA sequence

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Protein sequence

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MPESKGRDSWVRAEEAMSLDHYQIDCNFFLSVRIPNVRFHSLHGWELMIGSVYKDFGFSHNDQIISGLVFTFPVILDTIFKYWIFRYLNCVSPSLQ

CmaCh09G012660 (gene) of Cucurbita maxima (Rimu) v1.1 genome