; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh09G012830 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh09G012830
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionangio-associated migratory cell protein
Genome locationCma_Chr09:8826279..8828560
RNA-Seq ExpressionCmaCh09G012830
SyntenyCmaCh09G012830
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR024977 - Anaphase-promoting complex subunit 4, WD40 domain
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592326.1 Vegetative incompatibility protein HET-E-1, partial [Cucurbita argyrosperma subsp. sororia]5.6e-3793.75Show/hide
Query:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS
        SSPWAATGGMD+KLIIWDLRQSTPRST EHEDGVSCLTWIGTSRYL TGCVDGRVRIWD+LS ECVRTFTGHSDAIQSLS
Subjt:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS

XP_008463066.1 PREDICTED: angio-associated migratory cell protein isoform X1 [Cucumis melo]5.6e-3790.24Show/hide
Query:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLSRC
        SSPWAATGGMDQKLIIWDLRQSTPRST EHEDGV+CLTWIGTSRYL TGCVDGRVRIWDSLS ECV+TF+GHSDAIQSL+ C
Subjt:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLSRC

XP_008463068.1 PREDICTED: angio-associated migratory cell protein isoform X2 [Cucumis melo]5.6e-3790.24Show/hide
Query:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLSRC
        SSPWAATGGMDQKLIIWDLRQSTPRST EHEDGV+CLTWIGTSRYL TGCVDGRVRIWDSLS ECV+TF+GHSDAIQSL+ C
Subjt:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLSRC

XP_023535004.1 angio-associated migratory cell protein-like [Cucurbita pepo subsp. pepo]3.3e-3795Show/hide
Query:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS
        SSPWAATGGMD KLIIWDLRQSTPRST EHEDGVSCLTWIGTSRYL TGCVDGRVRIWDSLS ECVRTFTGHSDAIQSLS
Subjt:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS

XP_038884723.1 angio-associated migratory cell protein [Benincasa hispida]1.2e-3692.5Show/hide
Query:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS
        SSPWAATGGMDQKLIIWDL+QSTPRST EHEDGV+CLTWIGTSRYL TGCVDGRVRIWDSLS ECVRTFTGHSDAIQSL+
Subjt:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS

TrEMBL top hitse value%identityAlignment
A0A0A0KBX7 WD_REPEATS_REGION domain-containing protein1.8e-3687.8Show/hide
Query:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLSRC
        SSPWAATGGMDQKLIIWDL+QSTPRST +HEDGV+CLTWIGTSRYL TGCVDGRVRIWDSLS ECV+TF+GHSDAIQSL+ C
Subjt:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLSRC

A0A1S3CIC4 angio-associated migratory cell protein isoform X12.7e-3790.24Show/hide
Query:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLSRC
        SSPWAATGGMDQKLIIWDLRQSTPRST EHEDGV+CLTWIGTSRYL TGCVDGRVRIWDSLS ECV+TF+GHSDAIQSL+ C
Subjt:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLSRC

A0A1S3CID2 angio-associated migratory cell protein isoform X22.7e-3790.24Show/hide
Query:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLSRC
        SSPWAATGGMDQKLIIWDLRQSTPRST EHEDGV+CLTWIGTSRYL TGCVDGRVRIWDSLS ECV+TF+GHSDAIQSL+ C
Subjt:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLSRC

A0A5D3DTZ8 Angio-associated migratory cell protein isoform X26.0e-3789.02Show/hide
Query:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLSRC
        +SPWAATGGMDQKLIIWDLRQSTPRST EHEDGV+CLTWIGTSRYL TGCVDGRVRIWDSLS ECV+TF+GHSDAIQSL+ C
Subjt:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLSRC

A0A6J1DN15 angio-associated migratory cell protein-like isoform X12.5e-3590Show/hide
Query:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS
        SSPWAATGGMDQKLIIWDLR S PR+T  HEDGV+CLTWIGTSRYL TGCVDGRVRIWDSLS ECVRTFTGHSDAIQSLS
Subjt:  SSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS

SwissProt top hitse value%identityAlignment
P39014 F-box protein MET304.8e-0737.84Show/hide
Query:  TGGMDQKLIIWDL-RQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSL
        TG  D  + IWDL      R    H DGV  L +    R L TG +D  +R+W+ ++ EC+ T+ GHSD++ S+
Subjt:  TGGMDQKLIIWDL-RQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSL

Q15542 Transcription initiation factor TFIID subunit 52.8e-0737.33Show/hide
Query:  TGGMDQKLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS
        +GG D+   +W      P   +  H   V+C  +   S Y+ TG  D  VR+WD L+  CVR FTGH   I SL+
Subjt:  TGGMDQKLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS

Q58D20 Notchless protein homolog 16.3e-0734.48Show/hide
Query:  VAFD-SSPWAATGGMDQKLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWD-SLSEECVRTFTGHSDAIQSLS
        VAF  +  + A+G  D  +  WDL   TP  T + H   V  ++W    + L +GC +G++ +WD S  ++  R  TGHS  I +LS
Subjt:  VAFD-SSPWAATGGMDQKLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWD-SLSEECVRTFTGHSDAIQSLS

Q8C092 Transcription initiation factor TFIID subunit 52.1e-0737.33Show/hide
Query:  TGGMDQKLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS
        +GG D+   +W      P   +  H   V+C  +   S Y+ TG  D  VR+WD L+  CVR FTGH   I SL+
Subjt:  TGGMDQKLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS

Q9NVX2 Notchless protein homolog 14.8e-0735.63Show/hide
Query:  VAFD-SSPWAATGGMDQKLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWD-SLSEECVRTFTGHSDAIQSLS
        VAF  +  + A+G  D  +  WDL   TP  T + H   V  ++W    R L +GC +G++ +WD S  ++  RT  GHS  I  LS
Subjt:  VAFD-SSPWAATGGMDQKLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWD-SLSEECVRTFTGHSDAIQSLS

Arabidopsis top hitse value%identityAlignment
AT1G15440.1 periodic tryptophan protein 21.7e-0735.29Show/hide
Query:  KLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSL
        +L++WD R  T     + H   V+C+T+   S+ L TG  D +V++W+ +S  C  TFT H++A+ +L
Subjt:  KLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSL

AT1G15440.2 periodic tryptophan protein 21.7e-0735.29Show/hide
Query:  KLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSL
        +L++WD R  T     + H   V+C+T+   S+ L TG  D +V++W+ +S  C  TFT H++A+ +L
Subjt:  KLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSL

AT1G71840.1 transducin family protein / WD-40 repeat family protein1.5e-2766.67Show/hide
Query:  PWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS
        P AATGGMD+KLIIWDL+ STPR   EHE+GV+ LTWIGTS+YL TGC +G V IWDSL   CV T+ GH DA+Q++S
Subjt:  PWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS

AT5G08390.1 Transducin/WD40 repeat-like superfamily protein2.2e-0734.67Show/hide
Query:  ATGGMDQKLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSL
        A+G +D  L IWD+R+     TY+ H  GV+ L +    R++ +G  D  V++WD  + + +  F  H   IQSL
Subjt:  ATGGMDQKLIIWDLRQSTPRSTYE-HEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSL

AT5G25150.1 TBP-associated factor 57.6e-0836.62Show/hide
Query:  DQKLIIWDLRQSTP-RSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS
        D+   IW + +  P R    H   V C+ W     Y+ TG  D  VR+WD  + ECVR F GH   + SL+
Subjt:  DQKLIIWDLRQSTP-RSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACACTTGTTGCTTTTGACAGCTCCCCTTGGGCTGCAACTGGAGGAATGGATCAGAAGCTCATCATTTGGGATCTTCGACAGTCGACGCCACGCAGTACA
TACGAGCACGAGGATGGAGTATCATGTCTTACTTGGATTGGCACATCGAGATATCTTGAAACCGGATGTGTCGATGGTCGAGTACGAATATGGGATAGCCTCTCT
GAAGAATGTGTAAGAACCTTCACTGGGCACTCTGACGCCATCCAATCTCTCTCTCGGTGTCTGCCAATCATGAGTACCTTGTTTCTATTGCTCTCGATACATCCG
CTCGGATTTTTGAGATTGCTGAGTATGATTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGACACTTGTTGCTTTTGACAGCTCCCCTTGGGCTGCAACTGGAGGAATGGATCAGAAGCTCATCATTTGGGATCTTCGACAGTCGACGCCACGCAGTACA
TACGAGCACGAGGATGGAGTATCATGTCTTACTTGGATTGGCACATCGAGATATCTTGAAACCGGATGTGTCGATGGTCGAGTACGAATATGGGATAGCCTCTCT
GAAGAATGTGTAAGAACCTTCACTGGGCACTCTGACGCCATCCAATCTCTCTCTCGGTGTCTGCCAATCATGAGTACCTTGTTTCTATTGCTCTCGATACATCCG
CTCGGATTTTTGAGATTGCTGAGTATGATTGATTGA
Protein sequenceShow/hide protein sequence
MKTLVAFDSSPWAATGGMDQKLIIWDLRQSTPRSTYEHEDGVSCLTWIGTSRYLETGCVDGRVRIWDSLSEECVRTFTGHSDAIQSLSRCLPIMSTLFLLLSIHP
LGFLRLLSMID