; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh10G006010 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh10G006010
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionHeavy metal-associated domain containing protein
Genome locationCma_Chr10:2777656..2778330
RNA-Seq ExpressionCmaCh10G006010
SyntenyCmaCh10G006010
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily
IPR044526 - Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022961192.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X1 [Cucurbita moschata]5.8e-4783.46Show/hide
Query:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVT-------------VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIV
        MGKLKKIAKALDCF P+S TS ARFDKDPLIASSNKGQLPTLED V              VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIV
Subjt:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVT-------------VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIV

Query:  IGYILPYEVVESVSKVKSSQLWQSSLA
        +G ILPYEVVESVSKVKSSQLWQSSLA
Subjt:  IGYILPYEVVESVSKVKSSQLWQSSLA

XP_022961193.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X2 [Cucurbita moschata]1.3e-4992.98Show/hide
Query:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV
        MGKLKKIAKALDCF P+S TS ARFDKDPLIASSNKGQLPTLED V VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIV+G ILPYEVVESV
Subjt:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV

Query:  SKVKSSQLWQSSLA
        SKVKSSQLWQSSLA
Subjt:  SKVKSSQLWQSSLA

XP_022987912.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X1 [Cucurbita maxima]3.8e-54100Show/hide
Query:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV
        MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV
Subjt:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV

Query:  SKVKSSQLWQSSLA
        SKVKSSQLWQSSLA
Subjt:  SKVKSSQLWQSSLA

XP_022987913.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X2 [Cucurbita maxima]4.1e-4893.86Show/hide
Query:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV
        MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKME       DLETKMVIVIGYILPYEVVESV
Subjt:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV

Query:  SKVKSSQLWQSSLA
        SKVKSSQLWQSSLA
Subjt:  SKVKSSQLWQSSLA

XP_023515649.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like [Cucurbita pepo subsp. pepo]6.5e-4683.33Show/hide
Query:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVT-------------VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIV
        MGKLKKIAKALDCF P+S TS ARFDKDPLIASSNKG+LPTLED V              VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIV
Subjt:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVT-------------VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIV

Query:  IGYILPYEVVESVSKVKSSQLWQSSL
        IG ILPYEVVESVSKVKSSQLWQSSL
Subjt:  IGYILPYEVVESVSKVKSSQLWQSSL

TrEMBL top hitse value%identityAlignment
A0A0A0LZH7 HMA domain-containing protein8.8e-3358.22Show/hide
Query:  MGKLKKIAKALDCFSPTSSTSIAR-----------------FDKDPLIASSNK--GQLPTLEDAVT-------------VTLRVSMHCKGCARKVEKHIS
        MGKLKK+ K  DCFS +S++  +                  FDK PLIA++N+   QLPTL+D V              VTLRVSMHCKGCARKVEKHIS
Subjt:  MGKLKKIAKALDCFSPTSSTSIAR-----------------FDKDPLIASSNK--GQLPTLEDAVT-------------VTLRVSMHCKGCARKVEKHIS

Query:  KMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLWQSSLA
        KMEGV S+T+DLETKMVI+IG ILP+EVVESVSKVK++QLWQSS+A
Subjt:  KMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLWQSSLA

A0A6J1H9I5 protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X12.8e-4783.46Show/hide
Query:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVT-------------VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIV
        MGKLKKIAKALDCF P+S TS ARFDKDPLIASSNKGQLPTLED V              VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIV
Subjt:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVT-------------VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIV

Query:  IGYILPYEVVESVSKVKSSQLWQSSLA
        +G ILPYEVVESVSKVKSSQLWQSSLA
Subjt:  IGYILPYEVVESVSKVKSSQLWQSSLA

A0A6J1HB54 protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X26.1e-5092.98Show/hide
Query:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV
        MGKLKKIAKALDCF P+S TS ARFDKDPLIASSNKGQLPTLED V VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIV+G ILPYEVVESV
Subjt:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV

Query:  SKVKSSQLWQSSLA
        SKVKSSQLWQSSLA
Subjt:  SKVKSSQLWQSSLA

A0A6J1JBN4 protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X11.8e-54100Show/hide
Query:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV
        MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV
Subjt:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV

Query:  SKVKSSQLWQSSLA
        SKVKSSQLWQSSLA
Subjt:  SKVKSSQLWQSSLA

A0A6J1JKR3 protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X22.0e-4893.86Show/hide
Query:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV
        MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKME       DLETKMVIVIGYILPYEVVESV
Subjt:  MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESV

Query:  SKVKSSQLWQSSLA
        SKVKSSQLWQSSLA
Subjt:  SKVKSSQLWQSSLA

SwissProt top hitse value%identityAlignment
Q58FZ0 Protein SODIUM POTASSIUM ROOT DEFECTIVE 22.0e-1350Show/hide
Query:  DAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLW
        D   V L+VS+HC+GC  KV KH+++M+GV SF +D   K V V G I P E+++S+SKVK++Q W
Subjt:  DAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLW

Q84J88 Heavy metal-associated isoprenylated plant protein 361.6e-0738.24Show/hide
Query:  TVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKV-KSSQLWQSSL
        T  LRVS+HC+GC RK++K +SK++GV +  +D++ + V VIG + P  +++ + K  + ++LW +S+
Subjt:  TVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKV-KSSQLWQSSL

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 13.4e-1354.84Show/hide
Query:  VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLW
        V LRVS+HCKGCA KV+KH+SK++GV S+ +D   K V V G + P  V+ S+SKVK++Q W
Subjt:  VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLW

Q8RXH8 Protein SODIUM POTASSIUM ROOT DEFECTIVE 31.4e-1154.69Show/hide
Query:  VTLRVSM--HCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLW
        V LRVS+  HC+GC  KV+KH+SKM+GV SF +D  +K V V G I P EV+  +SKVK++Q W
Subjt:  VTLRVSM--HCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLW

Q94BT9 Copper transport protein ATX14.7e-0742.42Show/hide
Query:  TVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKV-KSSQLWQS
        TV LRV+M C+GC   V++ + KMEGV SF VD++ + V V G + P  V+++V+K  K +  W++
Subjt:  TVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKV-KSSQLWQS

Arabidopsis top hitse value%identityAlignment
AT2G28660.1 Chloroplast-targeted copper chaperone protein1.1e-1955.1Show/hide
Query:  SPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLWQSS
        S +SS+S + F       SS     P+ +D V V LRVS+HCKGC  KV KHISKMEGV S+T+DL TK V V+G I P  +VES+SKVK +QLW SS
Subjt:  SPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLWQSS

AT2G37390.1 Chloroplast-targeted copper chaperone protein1.4e-1450Show/hide
Query:  DAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLW
        D   V L+VS+HC+GC  KV KH+++M+GV SF +D   K V V G I P E+++S+SKVK++Q W
Subjt:  DAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLW

AT2G37390.2 Chloroplast-targeted copper chaperone protein2.4e-1442.11Show/hide
Query:  DKDP---LIASSNKGQLPTLEDAVT--------VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLW
        D+DP   + A +  G+  TL +  T        V L+VS+HC+GC  KV KH+++M+GV SF +D   K V V G I P E+++S+SKVK++Q W
Subjt:  DKDP---LIASSNKGQLPTLEDAVT--------VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLW

AT3G24450.1 Heavy metal transport/detoxification superfamily protein1.4e-2245.32Show/hide
Query:  MGKLKKIAKALDC-FSPTSSTSI----------ARFDKDPLIASSNK--GQLPTLEDAVT---------------VTLRVSMHCKGCARKVEKHISKMEG
        MGKL+KI +  DC F PT+  S             F+K+PLI SS +  G++  L+D V                V L+VSMHC GCA+KVEKHISK++G
Subjt:  MGKLKKIAKALDC-FSPTSSTSI----------ARFDKDPLIASSNK--GQLPTLEDAVT---------------VTLRVSMHCKGCARKVEKHISKMEG

Query:  VRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLWQS
        V  + V+LE+K V+V G ILP +V+ES+ KVK++QLW S
Subjt:  VRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLWQS

AT5G02600.2 Heavy metal transport/detoxification superfamily protein2.4e-1454.84Show/hide
Query:  VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLW
        V LRVS+HCKGCA KV+KH+SK++GV S+ +D   K V V G + P  V+ S+SKVK++Q W
Subjt:  VTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGCTGAAGAAAATTGCGAAGGCTTTGGATTGTTTCAGTCCCACATCGTCTACTTCCATCGCTCGTTTTGACAAAGACCCGCTTATCGCCAGCAGCAACAAGGG
CCAACTCCCGACATTGGAGGACGCTGTGACGGTGACGCTCAGGGTGTCCATGCACTGTAAAGGCTGTGCAAGAAAAGTGGAGAAACATATTTCAAAGATGGAAGGAGTGA
GGTCGTTCACTGTAGACTTGGAGACTAAGATGGTGATTGTAATTGGATACATTCTGCCGTATGAAGTGGTGGAGAGCGTTTCTAAAGTCAAAAGCTCGCAGCTTTGGCAA
TCCTCGCTAGCTTGA
mRNA sequenceShow/hide mRNA sequence
TTTTAGTGCCTTCTGATGGGGAAGCTGAAGAAAATTGCGAAGGCTTTGGATTGTTTCAGTCCCACATCGTCTACTTCCATCGCTCGTTTTGACAAAGACCCGCTTATCGC
CAGCAGCAACAAGGGCCAACTCCCGACATTGGAGGACGCTGTGACGGTGACGCTCAGGGTGTCCATGCACTGTAAAGGCTGTGCAAGAAAAGTGGAGAAACATATTTCAA
AGATGGAAGGAGTGAGGTCGTTCACTGTAGACTTGGAGACTAAGATGGTGATTGTAATTGGATACATTCTGCCGTATGAAGTGGTGGAGAGCGTTTCTAAAGTCAAAAGC
TCGCAGCTTTGGCAATCCTCGCTAGCTTGATCATTATTGGCATATCAACAAATTAATAATTTTATGTCTTTAATTTCTTTATTCTATATGTCGTTTATAGGAATATGAGT
ATTTATACACGTCAACTCAAATATTAAAATAACTTATAAGATTGAATTTCGCTACTAATTGATATTGTCATTTTTTGTCTTTCTATTTCGG
Protein sequenceShow/hide protein sequence
MGKLKKIAKALDCFSPTSSTSIARFDKDPLIASSNKGQLPTLEDAVTVTLRVSMHCKGCARKVEKHISKMEGVRSFTVDLETKMVIVIGYILPYEVVESVSKVKSSQLWQ
SSLA