CuGenDBv2

Gene ID	CmaCh10G006100
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Coiled-coil domain-containing protein 9-like
Genome location	Cma_Chr10:2819267..2820837
RNA-Seq Expression	CmaCh10G006100
Synteny	CmaCh10G006100
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6589907.1 hypothetical protein SDJN03_15330, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-64

95.8

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Query:  MASICLLSSKTLALPSAAYLPI-SSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS
        MASICLLSSKTL LPSAAYLP+ SSSSTSHSCCFGGCRFSFP+KPI TSNLI+VRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS
Subjt:  MASICLLSSKTLALPSAAYLPI-SSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS

Query:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

KAG7023577.1 hypothetical protein SDJN02_14603 [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-63

95.1

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Query:  MASICLLSSKTLALPSAAYLPI-SSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS
        MASICLLSSKTL LPSAAYLP+ SSSSTSHSCCFGGCRFSFP+KPI TSNLI+VR RTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS
Subjt:  MASICLLSSKTLALPSAAYLPI-SSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS

Query:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

XP_022960823.1 uncharacterized protein LOC111461515 isoform X1 [Cucurbita moschata]

1.7e-64

95.8

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Query:  MASICLLSSKTLALPSAAYLPI-SSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS
        MASICLLSSKTL LPSAAYLPI SSSST+HSCCFGGCRFSFP+KPI TSNLI+VRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS
Subjt:  MASICLLSSKTLALPSAAYLPI-SSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS

Query:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

XP_022987895.1 uncharacterized protein LOC111485300 isoform X1 [Cucurbita maxima]

2.6e-68

100

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Query:  MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSP
        MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSP
Subjt:  MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

XP_023516602.1 uncharacterized protein LOC111780429 isoform X1 [Cucurbita pepo subsp. pepo]

5.9e-65

97.2

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Query:  MASICLLSSKTLALPSAAYLPI-SSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS
        MASICLLSSKTL LPSAAYLPI SSSSTSHSCCFGGCRFSFPNKPI  SNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS
Subjt:  MASICLLSSKTLALPSAAYLPI-SSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS

Query:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CVD6 uncharacterized protein LOC111014560

3.8e-57

87.86

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Query:  MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSP
        MASICL SSKTLALPSA YL ISSSSTSHSC FG CR SFP KP+  S+L+I RRRTG+ VVRMAP+EEK+TRRNPLDFPIEWERPKPGRRPDIFPQFSP
Subjt:  MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE

A0A6J1F0T5 uncharacterized protein LOC111441100

2.6e-58

89.44

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Query:  MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSP
        MASIC  SSKTL LPSAAYLP+SSSSTSHS C  GCR SFPN+PI  SNLII RRRTGR VVRMAPEEEK+TRRNPLDFPIEW+RPKPGRRPDIFPQFSP
Subjt:  MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

A0A6J1HA36 uncharacterized protein LOC111461515 isoform X1

8.4e-65

95.8

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Query:  MASICLLSSKTLALPSAAYLPI-SSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS
        MASICLLSSKTL LPSAAYLPI SSSST+HSCCFGGCRFSFP+KPI TSNLI+VRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS
Subjt:  MASICLLSSKTLALPSAAYLPI-SSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFS

Query:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

A0A6J1HQ01 uncharacterized protein LOC111465629

7.6e-58

88.73

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Query:  MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSP
        MASICL SSKTL LPSAAYL +SSSSTSHS C  GCR SFPN+PI  SNLII +RRTGR VVRMAPEEEK+TRRNPLDFPIEW+RPKPGRRPDIFPQFSP
Subjt:  MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

A0A6J1JI28 uncharacterized protein LOC111485300 isoform X1

1.2e-68

100

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Query:  MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSP
        MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSP
Subjt:  MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G17240.1 unknown protein

1.9e-32

63.01

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Query:  MASICLLSSKTLALPSAAYL----PISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFP
        MAS+C  S++ L  PS   L     ISS S S  C      F+F +    +S     R R    VV MAPEEEK+TRRNPLDFPIEWERPKPGRRPDIFP
Subjt:  MASICLLSSKTLALPSAAYL----PISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFP

Query:  QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        +FSPMKTPLPPP+P DPPEEDEEEEEKKEEEEENPD+E  ++PEKQ
Subjt:  QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

AT3G24506.1 unknown protein

4.7e-28

60.47

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Query:  PISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVR----RRTGR--HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPP
        P+SSSS + +       FS  N     S + + R    R+T +   VV MAPEEEK+TRRNPLDFPIEWERPKPGRRPDIFP+FSPMK+PLPPP+P DPP
Subjt:  PISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVR----RRTGR--HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPP

Query:  EEDEEEEEKKEEE-EENPDKENPDEPEKQ
        EE+EEEEEKKEEE E++P+KE+ D+P+ +
Subjt:  EEDEEEEEKKEEE-EENPDKENPDEPEKQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGTCGATATGCCTGCTCAGCTCTAAAACCCTAGCCTTACCGTCGGCAGCTTATCTACCAATATCCTCTTCTTCTACTAGCCATAGTTGCTGTTTTGGCGGCTGCAG
ATTCTCTTTCCCAAACAAGCCCATTCCGACCTCTAATTTGATTATTGTTAGAAGGAGAACGGGGAGGCATGTGGTTCGAATGGCCCCGGAGGAAGAGAAGATCACTCGTC
GCAATCCACTCGATTTCCCAATTGAGTGGGAGAGGCCAAAGCCAGGACGTAGGCCAGACATCTTTCCTCAGTTTAGCCCCATGAAAACACCATTGCCACCACCATTGCCG
TGTGATCCCCCTGAAGAGGATGAGGAGGAGGAAGAGAAAAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCCGAGAAGCAGTAG

mRNA sequence

Show/hide mRNA sequence

ATTCTGAGAAATTCCAGAATTCGATTATTTCATAAAATTTAAAGGATAATTTAGTGGAACAAACACCGCGCTGCGCTGTGGAGAAGAAAATAAGAGGCGGTCCGGAGTCG
GACATCACTTGTGGCGGCTAGTTGATTTCGGTGGAATCAGCCACCAGGAGATTCAGTTAGACCCTACCAGTCACCTCAGGGGAAGAGGAAGATCATGGCGTCGATATGCC
TGCTCAGCTCTAAAACCCTAGCCTTACCGTCGGCAGCTTATCTACCAATATCCTCTTCTTCTACTAGCCATAGTTGCTGTTTTGGCGGCTGCAGATTCTCTTTCCCAAAC
AAGCCCATTCCGACCTCTAATTTGATTATTGTTAGAAGGAGAACGGGGAGGCATGTGGTTCGAATGGCCCCGGAGGAAGAGAAGATCACTCGTCGCAATCCACTCGATTT
CCCAATTGAGTGGGAGAGGCCAAAGCCAGGACGTAGGCCAGACATCTTTCCTCAGTTTAGCCCCATGAAAACACCATTGCCACCACCATTGCCGTGTGATCCCCCTGAAG
AGGATGAGGAGGAGGAAGAGAAAAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCCGAGAAGCAGTAG

Protein sequence

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MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLP
CDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

CmaCh10G006100 (gene) of Cucurbita maxima (Rimu) v1.1 genome