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CmaCh10G006860 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh10G006860
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description40S ribosomal protein S30
Genome locationCma_Chr10:3112805..3114884
RNA-Seq ExpressionCmaCh10G006860
SyntenyCmaCh10G006860
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR006846 - Ribosomal protein S30


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR64610.1 hypothetical protein CICLE_v10009868mg [Citrus clementina]1.8e-2596.97Show/hide
Query:  KQFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        K+ AMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
Subjt:  KQFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

KAA0061505.1 Ribosomal protein S30 [Cucumis melo var. makuwa]6.3e-2698.46Show/hide
Query:  QFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        +FAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
Subjt:  QFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

KAF4346455.1 hypothetical protein G4B88_007409 [Cannabis sativa]6.3e-2696.97Show/hide
Query:  KQFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        K+F MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
Subjt:  KQFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

KAG6599498.1 40S ribosomal protein S30, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2594.12Show/hide
Query:  RSKQFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        R+ + AMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
Subjt:  RSKQFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

XP_004141043.2 40S ribosomal protein S30 [Cucumis sativus]6.3e-2698.46Show/hide
Query:  QFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        +FAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
Subjt:  QFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

TrEMBL top hitse value%identityAlignment
A0A067ELF8 40S ribosomal protein S30 (Fragment)8.9e-2696.97Show/hide
Query:  KQFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        K+ AMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
Subjt:  KQFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

A0A0A0LFS8 40S ribosomal protein S303.1e-2698.46Show/hide
Query:  QFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        +FAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
Subjt:  QFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

A0A5A7V6N6 40S ribosomal protein S303.1e-2698.46Show/hide
Query:  QFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        +FAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
Subjt:  QFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

A0A6P4A6S7 40S ribosomal protein S308.9e-2692.96Show/hide
Query:  RYRSKQF-AMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        RY   QF  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
Subjt:  RYRSKQF-AMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

A0A7J6DK29 40S ribosomal protein S303.1e-2696.97Show/hide
Query:  KQFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        K+F MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
Subjt:  KQFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

SwissProt top hitse value%identityAlignment
P49689 40S ribosomal protein S301.7e-2696.77Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSEK
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

P62860 40S ribosomal protein S306.6e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

P62861 40S ribosomal protein S306.6e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

P62862 40S ribosomal protein S306.6e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

P62866 40S ribosomal protein S306.6e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

Arabidopsis top hitse value%identityAlignment
AT2G19750.1 Ribosomal protein S30 family protein1.2e-2796.77Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSEK
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

AT4G29390.1 Ribosomal protein S30 family protein1.2e-2796.77Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSEK
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

AT5G56670.1 Ribosomal protein S30 family protein1.2e-2796.77Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSEK
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCAGGAAGGTACCGAAGCAAGCAATTTGCCATGGGTAAGGTTCACGGATCTCTGGCTCGTGCTGGGAAGGTGAGAGGTCAAACTCCGAAAGTAGCGAAG
CAGGACAAGAAGAAGAAACCCCGTGGGCGTGCACACAAGCGGATGCAATACAATCGCAGATTCGTCACTGCTGTGGTTGGCTTTGGAAAGAAGAGAGGACCCAAC
TCCTCTGAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCAGGAAGGTACCGAAGCAAGCAATTTGCCATGGGTAAGGTTCACGGATCTCTGGCTCGTGCTGGGAAGGTGAGAGGTCAAACTCCGAAAGTAGCGAAG
CAGGACAAGAAGAAGAAACCCCGTGGGCGTGCACACAAGCGGATGCAATACAATCGCAGATTCGTCACTGCTGTGGTTGGCTTTGGAAAGAAGAGAGGACCCAAC
TCCTCTGAGAAGTAAGCAAACGGCGAAATCATGAGGAGATTTTCCGCTCGAGAGGCATGGTTTTGTGATTTATTAAGCTTTTTCCTCCTATTTCTCATAGATGTT
TTAGTTTATTGAAGATTTTGACCGTGTTAAAGATACTTATTTCGACAATATATTAAGAGTAAATGTGACCTGGACCTGAATTTTTGCTAGTCAATTATTTTCTCT
CTCAATTTTCATATTTTCCGTTGCTGGTTTTAAGCTATATGTCGTTGCATGCCTAGAGTTCTCTTGATGACATTATTTGTCTTCATTTAAGCTTCAAAAAGGGTT
TAATCTTCTGCATTCTATGTCATATTTGCATCAACTATATGGAGGGTGGCAGTTCTTGATGATTTGGGTGCGGGAACAAATTTAGGTTTCTGATAAAATAACACA
AGCTTCCCCAAATCTGGATTCAGTTTTTGTCATTAGGGCTTGAGGTAGAGGAATCCTCTACCCAAAGAAACTAGGAGGGTCCATAGTTAACGATCTTTAGGTTAC
TCTTAGAAATTACATGATGTAATTGCCCTAAGTCCCGG
Protein sequenceShow/hide protein sequence
MAPGRYRSKQFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK