CuGenDBv2

Gene ID	CmaCh10G010860
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Genome location	Cma_Chr10:7157095..7161484
RNA-Seq Expression	CmaCh10G010860
Synteny	CmaCh10G010860
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H

Homology

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GenBank top hits

e value

%identity

Alignment

DAZ85482.1 TPA: NADH dehydrogenase ND1 subunit [Flueggea virosa]

2.2e-14

66.18

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Query:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINIC--TNDQAVLPTIPIQS
        FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+++IC  +N  + +  +  QS
Subjt:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINIC--TNDQAVLPTIPIQS

KAF4358369.1 hypothetical protein G4B88_017246 [Cannabis sativa]

4.3e-18

63.53

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Query:  ILWVLVPILTTVLGITIDVPV------------FFLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINI
        I+W+L+P  T VLGITI VP              FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+++I
Subjt:  ILWVLVPILTTVLGITIDVPV------------FFLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINI

KAF4387297.1 hypothetical protein F8388_016706 [Cannabis sativa]

1.2e-15

53.47

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Query:  ILWVLVPILTTVLGITIDV----------PV------------------FFLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIIN
        I+W+L+P  T VLGITI V          P+                   FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+++
Subjt:  ILWVLVPILTTVLGITIDV----------PV------------------FFLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIIN

Query:  I
        I
Subjt:  I

QJD26700.1 NdhA [Trichosanthes rosthornii]

7.6e-15

66.67

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Query:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINICTNDQAVLPTIPIQS
        FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+++I +N  + +  +  QS
Subjt:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINICTNDQAVLPTIPIQS

YP_009776877.1 NADH dehydrogenase subunit 1 [Phyllanthus emblica]

2.2e-14

66.18

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Query:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINIC--TNDQAVLPTIPIQS
        FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+++IC  +N  + +  +  QS
Subjt:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINIC--TNDQAVLPTIPIQS

TrEMBL top hits

e value

%identity

Alignment

A0A251RRE6 Putative NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H

1.0e-17

58.51

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Query:  ILWVLVPILTTVLGITIDVPVF---------------------FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINI
        I+WVL+PI T VLGITI V V                      FLWI+ISS+AP+GLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+++I
Subjt:  ILWVLVPILTTVLGITIDVPVF---------------------FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINI

A0A4P8Y4G0 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

1.1e-14

66.18

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Query:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINIC--TNDQAVLPTIPIQS
        FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+++IC  +N  + +  +  QS
Subjt:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINIC--TNDQAVLPTIPIQS

A0A6M3RVV4 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

3.7e-15

66.67

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Query:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINICTNDQAVLPTIPIQS
        FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+++I +N  + +  +  QS
Subjt:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINICTNDQAVLPTIPIQS

A0A7J6EKW2 Uncharacterized protein

2.1e-18

63.53

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Query:  ILWVLVPILTTVLGITIDVPV------------FFLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINI
        I+W+L+P  T VLGITI VP              FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+++I
Subjt:  ILWVLVPILTTVLGITIDVPV------------FFLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINI

A0A7J6GWI2 Uncharacterized protein

5.7e-16

53.47

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Query:  ILWVLVPILTTVLGITIDV----------PV------------------FFLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIIN
        I+W+L+P  T VLGITI V          P+                   FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+++
Subjt:  ILWVLVPILTTVLGITIDV----------PV------------------FFLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIIN

Query:  I
        I
Subjt:  I

SwissProt top hits

e value

%identity

Alignment

A0A390 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

2.5e-16

64.71

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Query:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCI--INICTNDQAVLPTIPIQS
        FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+  I++ +N  + +  +  QS
Subjt:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCI--INICTNDQAVLPTIPIQS

Q06FP9 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

1.9e-16

66.18

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Query:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCI--INICTNDQAVLPTIPIQS
        FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+  I++ +N  + +  I  QS
Subjt:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCI--INICTNDQAVLPTIPIQS

Q14FA3 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

2.5e-16

64.71

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Query:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCI--INICTNDQAVLPTIPIQS
        FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+  I++ +N  + +  +  QS
Subjt:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCI--INICTNDQAVLPTIPIQS

Q2QD36 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

2.5e-16

59.74

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Query:  ITIDVPV-FFLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCI--INICTNDQAVLPTIPIQS
        +  D+P+  FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+  I++ +N  + +  +  QS
Subjt:  ITIDVPV-FFLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCI--INICTNDQAVLPTIPIQS

Q9MUL1 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

1.4e-16

58.33

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Query:  WVLVPILTTVLGITIDVPVFFLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINIC
        +++VP    ++   I++ +FF WI++SS+AP+GLLMSGYGSN KYSFLGGLRAT  S+SYEI L LC+++IC
Subjt:  WVLVPILTTVLGITIDVPVFFLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINIC

Arabidopsis top hits

e value

%identity

Alignment

ATCG01100.1 NADH dehydrogenase family protein

3.0e-17

64.71

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Query:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCI--INICTNDQAVLPTIPIQS
        FLWI+ISS+APIGLLMSGYGSN KYSFLGGLRA   SISYEI LTLC+  I++ +N  + +  +  QS
Subjt:  FLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCI--INICTNDQAVLPTIPIQS

ATMG00516.1 NADH dehydrogenase 1C

6.9e-06

44.68

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Query:  SISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINI
        +ISSL   G++++G  SN KY+FLG LR+    +SYE+S+ L +I +
Subjt:  SISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINI

ATMG01120.1 NADH dehydrogenase 1B

6.9e-06

44.68

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Query:  SISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINI
        +ISSL   G++++G  SN KY+FLG LR+    +SYE+S+ L +I +
Subjt:  SISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINI

ATMG01275.1 NADH dehydrogenase 1A

6.9e-06

44.68

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Query:  SISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINI
        +ISSL   G++++G  SN KY+FLG LR+    +SYE+S+ L +I +
Subjt:  SISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINI

Sequences

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CDS sequence

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GATACTGAGTCTAACCTGGGAGGACATCGAGATTGGAATTCTGAAAATCATAATGAAATTCTATGGGTGCTTGTCCCTATTTTGACAACTGTATTAGGAATCACA
ATCGACGTACCAGTGTTTTTTTTATGGATTTCCATTTCAAGTCTTGCTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAAGAAATATTCCTTTTTAGGT
GGTCTACGAGCTACTGTTCCATCAATTAGTTATGAAATATCATTAACTCTGTGTATTATCAATATATGTACAAATGATCAGGCAGTACTCCCCACCATCCCGATC
CAGAGTATGGACCTATCCACCCATTAA

mRNA sequence

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Protein sequence

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DTESNLGGHRDWNSENHNEILWVLVPILTTVLGITIDVPVFFLWISISSLAPIGLLMSGYGSNKKYSFLGGLRATVPSISYEISLTLCIINICTNDQAVLPTIPI
QSMDLSTH

CmaCh10G010860 (gene) of Cucurbita maxima (Rimu) v1.1 genome