; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh10G010880 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh10G010880
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionnuclear transcription factor Y subunit B-4-like
Genome locationCma_Chr10:7192352..7192783
RNA-Seq ExpressionCmaCh10G010880
SyntenyCmaCh10G010880
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590402.1 Nuclear transcription factor Y subunit B-4, partial [Cucurbita argyrosperma subsp. sororia]1.8e-6190.21Show/hide
Query:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN
        MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRD+ERIN
Subjt:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN

Query:  AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS
        AQFKTNIA EQQ+H          +QEQEQELEFYHGEIGETS
Subjt:  AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS

XP_022961414.1 nuclear transcription factor Y subunit B-4-like [Cucurbita moschata]9.9e-6087.41Show/hide
Query:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN
        MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRD+ERIN
Subjt:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN

Query:  AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS
        AQFKTNIA EQQ+H              +QELEFYHGEIGETS
Subjt:  AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS

XP_022968852.1 nuclear transcription factor Y subunit B-4-like [Cucurbita maxima]8.1e-70100Show/hide
Query:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN
        MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN
Subjt:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN

Query:  AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS
        AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS
Subjt:  AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS

XP_023546470.1 nuclear transcription factor Y subunit B-4-like [Cucurbita pepo subsp. pepo]5.8e-6090.78Show/hide
Query:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN
        MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRD+ERIN
Subjt:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN

Query:  AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGE
        AQFKTNIA EQQ H    +Q+QEQ+QEQEQELEF HGE  E
Subjt:  AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGE

XP_038880507.1 nuclear transcription factor Y subunit B-4-like [Benincasa hispida]1.8e-3770.16Show/hide
Query:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN
        MGE N + LQLPIANVGR+MKKILPQKAKISKEAK TMQECA+EFISFV SEAAEKCHK+NRRTLNGDDICWA GS GLDNYAE SAKYLLK+R+ ERI 
Subjt:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN

Query:  AQFKTNIAREQQEHGQEREQEQEQ
           K    +   + G++ + ++ Q
Subjt:  AQFKTNIAREQQEHGQEREQEQEQ

TrEMBL top hitse value%identityAlignment
A0A1S3BRX1 nuclear transcription factor Y subunit B-41.4e-3564.08Show/hide
Query:  NNGDE-LQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERINA-
        NNGDE L+LPIANV R+MKKI+PQK KISKEAK TMQECA EFISFVTSEAA++CH +NRRTLNGDDICWAF S GLDNYAE  AKYL KYR++ERI   
Subjt:  NNGDE-LQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERINA-

Query:  QFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS
        ++K  I        Q    + + ++EQE       GEIGETS
Subjt:  QFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS

A0A5A7U6S7 Nuclear transcription factor Y subunit B-42.2e-3664.79Show/hide
Query:  NNGDE-LQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERINA-
        NNGDE L+LPIANV R+MKKI+PQK KISKEAK TMQECA EFISFVTSEAA++CH +NRRTLNGDDICWAF S GLDNYAE  AKYLLKYR++ERI   
Subjt:  NNGDE-LQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERINA-

Query:  QFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS
        ++K  I        Q    + + ++EQE       GEIGETS
Subjt:  QFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS

A0A5D3CG76 Nuclear transcription factor Y subunit B-41.4e-3564.08Show/hide
Query:  NNGDE-LQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERINA-
        NNGDE L+LPIANV R+MKKI+PQK KISKEAK TMQECA EFISFVTSEAA++CH +NRRTLNGDDICWAF S GLDNYAE  AKYL KYR++ERI   
Subjt:  NNGDE-LQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERINA-

Query:  QFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS
        ++K  I        Q    + + ++EQE       GEIGETS
Subjt:  QFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS

A0A6J1HDY6 nuclear transcription factor Y subunit B-4-like4.8e-6087.41Show/hide
Query:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN
        MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRD+ERIN
Subjt:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN

Query:  AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS
        AQFKTNIA EQQ+H              +QELEFYHGEIGETS
Subjt:  AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS

A0A6J1HUN8 nuclear transcription factor Y subunit B-4-like3.9e-70100Show/hide
Query:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN
        MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN
Subjt:  MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERIN

Query:  AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS
        AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS
Subjt:  AQFKTNIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS

SwissProt top hitse value%identityAlignment
O04027 Nuclear transcription factor Y subunit B-41.0e-2757.14Show/hide
Query:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERINAQFKTNIARE
        LPIANVGRLMK+ILP  AKISKEAK T+QECATEFISFVT EA+EKCH++NR+T+NGDDI WA  + GLDNYA+A  ++L KYR+ ER     +T   + 
Subjt:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERINAQFKTNIARE

Query:  QQEHGQEREQEQEQEQEQE
          + G E+E     + + +
Subjt:  QQEHGQEREQEQEQEQEQE

O23310 Nuclear transcription factor Y subunit B-32.4e-2457.47Show/hide
Query:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIE
        LPIANV R+MKK LP  AKISK+AK T+QEC +EFISF+T EA++KC ++ R+T+NGDD+ WA  + G ++Y E    YL KYR++E
Subjt:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIE

O82248 Nuclear transcription factor Y subunit B-51.6e-2866.67Show/hide
Query:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIE
        LPIANVGR+MK ILP  AK+SKEAK TMQEC +EFISFVT EA++KCHK+ R+T+NGDDICWA  + G D+YA    KYL +YR +E
Subjt:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIE

Q9FGJ3 Nuclear transcription factor Y subunit B-21.4e-2459.77Show/hide
Query:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIE
        LPIANV R+MKK LP  AKISK+AK TMQEC +EFISFVT EA++KC K+ R+T+NGDD+ WA  + G ++Y E    YL ++R+IE
Subjt:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIE

Q9SIT9 Nuclear transcription factor Y subunit B-74.1e-2450Show/hide
Query:  NNGDELQ---LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDI--ER
        NN ++ Q   LPIANVGR+MKK+LP   KISK+AK T+QEC +EFISFVT EA++KC ++ R+T+NGDDI WA  + G ++Y      YL KYRD   E+
Subjt:  NNGDELQ---LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDI--ER

Query:  INAQFKTNIAREQQEHGQEREQEQEQEQEQEQ
        +N+  K    R+QQ+  Q++     Q QEQ+Q
Subjt:  INAQFKTNIAREQQEHGQEREQEQEQEQEQEQ

Arabidopsis top hitse value%identityAlignment
AT1G09030.1 nuclear factor Y, subunit B47.4e-2957.14Show/hide
Query:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERINAQFKTNIARE
        LPIANVGRLMK+ILP  AKISKEAK T+QECATEFISFVT EA+EKCH++NR+T+NGDDI WA  + GLDNYA+A  ++L KYR+ ER     +T   + 
Subjt:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERINAQFKTNIARE

Query:  QQEHGQEREQEQEQEQEQE
          + G E+E     + + +
Subjt:  QQEHGQEREQEQEQEQEQE

AT2G13570.1 nuclear factor Y, subunit B72.9e-2550Show/hide
Query:  NNGDELQ---LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDI--ER
        NN ++ Q   LPIANVGR+MKK+LP   KISK+AK T+QEC +EFISFVT EA++KC ++ R+T+NGDDI WA  + G ++Y      YL KYRD   E+
Subjt:  NNGDELQ---LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDI--ER

Query:  INAQFKTNIAREQQEHGQEREQEQEQEQEQEQ
        +N+  K    R+QQ+  Q++     Q QEQ+Q
Subjt:  INAQFKTNIAREQQEHGQEREQEQEQEQEQEQ

AT2G47810.1 nuclear factor Y, subunit B51.1e-2966.67Show/hide
Query:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIE
        LPIANVGR+MK ILP  AK+SKEAK TMQEC +EFISFVT EA++KCHK+ R+T+NGDDICWA  + G D+YA    KYL +YR +E
Subjt:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIE

AT4G14540.1 nuclear factor Y, subunit B31.7e-2557.47Show/hide
Query:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIE
        LPIANV R+MKK LP  AKISK+AK T+QEC +EFISF+T EA++KC ++ R+T+NGDD+ WA  + G ++Y E    YL KYR++E
Subjt:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIE

AT5G47640.1 nuclear factor Y, subunit B29.9e-2659.77Show/hide
Query:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIE
        LPIANV R+MKK LP  AKISK+AK TMQEC +EFISFVT EA++KC K+ R+T+NGDD+ WA  + G ++Y E    YL ++R+IE
Subjt:  LPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGAACAATGGAGATGAGCTTCAACTACCAATTGCCAACGTTGGGAGATTAATGAAGAAGATTCTTCCCCAAAAGGCCAAGATTTCCAAAGAAGCCAAA
GCGACAATGCAAGAATGTGCAACAGAGTTCATCAGCTTCGTAACAAGTGAAGCAGCTGAAAAATGTCACAAAGACAATCGAAGAACTCTCAATGGCGACGATATC
TGTTGGGCTTTTGGTTCTTTTGGCTTAGACAACTATGCTGAGGCTTCTGCCAAGTACTTGCTCAAATATAGGGACATCGAGAGAATCAACGCTCAATTCAAAACC
AATATCGCTCGAGAACAACAAGAACACGGTCAAGAACGAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACTTGAGTTTTATCATGGTGAAATCGGT
GAAACATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAGAACAATGGAGATGAGCTTCAACTACCAATTGCCAACGTTGGGAGATTAATGAAGAAGATTCTTCCCCAAAAGGCCAAGATTTCCAAAGAAGCCAAA
GCGACAATGCAAGAATGTGCAACAGAGTTCATCAGCTTCGTAACAAGTGAAGCAGCTGAAAAATGTCACAAAGACAATCGAAGAACTCTCAATGGCGACGATATC
TGTTGGGCTTTTGGTTCTTTTGGCTTAGACAACTATGCTGAGGCTTCTGCCAAGTACTTGCTCAAATATAGGGACATCGAGAGAATCAACGCTCAATTCAAAACC
AATATCGCTCGAGAACAACAAGAACACGGTCAAGAACGAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACTTGAGTTTTATCATGGTGAAATCGGT
GAAACATCCTAA
Protein sequenceShow/hide protein sequence
MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERINAQFKT
NIAREQQEHGQEREQEQEQEQEQEQELEFYHGEIGETS