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CmaCh10G011850 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh10G011850
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionLow temperature and salt responsive protein family
Genome locationCma_Chr10:8707733..8708696
RNA-Seq ExpressionCmaCh10G011850
SyntenyCmaCh10G011850
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7818031.1 hydrophobic protein RCI2B [Senna tora]1.0e-2192.98Show/hide
Query:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        MADPGTANCIDILLAI+LPPLGVFLKFGC+VEFWICL+LT+FGYLPGIIYAVYAITK
Subjt:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

KAG6508337.1 hypothetical protein ZIOFF_033711 [Zingiber officinale]2.3e-2170.37Show/hide
Query:  PLRLRPPPFPSVE---SEEIQKQKMADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        P+ L P  F  +    SE+     MAD GTANCIDIL+A+LLPPLGVFLKFGCQVEFWICL+LTLFGY+PGI+YAVYAITK
Subjt:  PLRLRPPPFPSVE---SEEIQKQKMADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

KCW44804.1 hypothetical protein EUGRSUZ_L01633, partial [Eucalyptus grandis]2.3e-2181.43Show/hide
Query:  FPSVESEEIQKQKMADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        F SV+ E+    KMAD GT NCIDILLAI+LPPLGVFLKFGCQVEFWICLVLTLFG++PGIIYAVYAITK
Subjt:  FPSVESEEIQKQKMADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

RWW57479.1 hypothetical protein BHE74_00035732 [Ensete ventricosum]1.8e-2194.74Show/hide
Query:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        MAD GTANCIDILLAI+LPPLGVFLKFGCQVEFWICL+LTLFGYLPGIIYAVYAITK
Subjt:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

XP_022961459.1 hydrophobic protein LTI6B-like [Cucurbita moschata]5.5e-23100Show/hide
Query:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
Subjt:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

TrEMBL top hitse value%identityAlignment
A0A058ZTP7 Uncharacterized protein (Fragment)1.1e-2181.43Show/hide
Query:  FPSVESEEIQKQKMADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        F SV+ E+    KMAD GT NCIDILLAI+LPPLGVFLKFGCQVEFWICLVLTLFG++PGIIYAVYAITK
Subjt:  FPSVESEEIQKQKMADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

A0A059CWH7 Uncharacterized protein1.1e-2181.43Show/hide
Query:  FPSVESEEIQKQKMADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        F SV+ E+    KMAD GT NCIDILLAI+LPPLGVFLKFGCQVEFWICLVLTLFG++PGIIYAVYAITK
Subjt:  FPSVESEEIQKQKMADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

A0A2K3L766 Hydrophobic protein LTI6A-like2.5e-2192.98Show/hide
Query:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        MAD GTANCIDILLAI+LPPLGVFLKFGC VEFWICLVLTLFGY+PGIIYAVYAITK
Subjt:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

A0A6J1HE36 hydrophobic protein LTI6B-like2.7e-23100Show/hide
Query:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
Subjt:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

A0A6J1HUN0 hydrophobic protein LTI6B-like2.7e-23100Show/hide
Query:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
Subjt:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

SwissProt top hitse value%identityAlignment
A2Y075 Hydrophobic protein LTI6B1.7e-1983.02Show/hide
Query:  GTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        GTANCIDIL+AI+LPPLGVFLKFGC  EFWICL+LT  GY+PGIIYA+YAITK
Subjt:  GTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

Q0DKW8 Hydrophobic protein LTI6B1.7e-1983.02Show/hide
Query:  GTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        GTANCIDIL+AI+LPPLGVFLKFGC  EFWICL+LT  GY+PGIIYA+YAITK
Subjt:  GTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

Q8H5T6 Hydrophobic protein LTI6A1.1e-1878.95Show/hide
Query:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        MAD  TA CIDI+LAI+LPPLGVF KFGC +EFWICL+LT FGYLPGIIYAV+ ITK
Subjt:  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

Q9ZNQ7 Hydrophobic protein RCI2A3.6e-1776.92Show/hide
Query:  TANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        TA  +DI++AILLPPLGVFL+FGC VEFWICLVLTL GY+PGIIYA+Y +TK
Subjt:  TANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

Q9ZNS6 Hydrophobic protein RCI2B7.3e-1878.85Show/hide
Query:  TANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        TA  ++I+LAI+LPPLGVFLKFGC+VEFWICL+LTLFGYLPGI+YA+Y ITK
Subjt:  TANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family1.6e-1256.25Show/hide
Query:  IDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        +++L AI +PP+GVFL++G  +EFW+CL+LTLF ++PG+IYA+Y +TK
Subjt:  IDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

AT2G24040.1 Low temperature and salt responsive protein family1.4e-1168.75Show/hide
Query:  CIDILLAILLPPLGVFLKFG-CQVEFWICLVLTLFGYLPGIIYAVYAI
        C +I +AILLPP+GV L+ G C VEF+ICL+LT  GYLPGIIYA+YAI
Subjt:  CIDILLAILLPPLGVFLKFG-CQVEFWICLVLTLFGYLPGIIYAVYAI

AT2G38905.1 Low temperature and salt responsive protein family4.5e-1564.71Show/hide
Query:  GTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAI
        G+   ++I+LAILLPP+GVFL++GC VEFWICL+LT+ GY+PGIIYA+Y +
Subjt:  GTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAI

AT3G05880.1 Low temperature and salt responsive protein family2.6e-1876.92Show/hide
Query:  TANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        TA  +DI++AILLPPLGVFL+FGC VEFWICLVLTL GY+PGIIYA+Y +TK
Subjt:  TANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK

AT3G05890.1 Low temperature and salt responsive protein family5.2e-1978.85Show/hide
Query:  TANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK
        TA  ++I+LAI+LPPLGVFLKFGC+VEFWICL+LTLFGYLPGI+YA+Y ITK
Subjt:  TANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCCATCACAAATCCAAAAGCACCCATGAATGCAAATTACGTAAGTGTGAAAGAGGCGAAACCCCACCATTGCTACCCACAACCACTGCGTCTAAGGCCT
CCTCCATTCCCCTCTGTTGAATCCGAAGAAATTCAAAAGCAAAAAATGGCCGACCCGGGCACCGCCAACTGCATCGATATCCTTCTGGCTATTCTTCTGCCGCCT
CTCGGAGTGTTTCTCAAATTTGGATGCCAGGTTGAGTTTTGGATCTGTTTGGTGCTAACTTTGTTCGGATACCTCCCCGGGATCATCTATGCTGTTTATGCCATC
ACCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCCCATCACAAATCCAAAAGCACCCATGAATGCAAATTACGTAAGTGTGAAAGAGGCGAAACCCCACCATTGCTACCCACAACCACTGCGTCTAAGGCCT
CCTCCATTCCCCTCTGTTGAATCCGAAGAAATTCAAAAGCAAAAAATGGCCGACCCGGGCACCGCCAACTGCATCGATATCCTTCTGGCTATTCTTCTGCCGCCT
CTCGGAGTGTTTCTCAAATTTGGATGCCAGGTTGAGTTTTGGATCTGTTTGGTGCTAACTTTGTTCGGATACCTCCCCGGGATCATCTATGCTGTTTATGCCATC
ACCAAGTGATTCCGAGTGGTGCTTCAACATCATGATCATCATCAAACTGTGTGTTTAGTTTGGTTTGTGTTATGTGTTCGTGTGCTTCCTTACTAAATTCTTTTT
TCTTGCGTTTTGTGGTTGTTGTTGGTTGTATTGATTGAATTGGTTGTTGTAAACAATATCCATCCAACTTTTTCTTCAACTTAATTACAACTTTACTTATATTTT
AATCTTTGATTGTTCTTCACATATCCGAATTGATGTTTAAATAATTAGGAACAAATTAGGCACCAAATAAAGGAAGAAAAGAGGCCCCACCCGTTGATATCTATG
AATTATATAAAACAAGGATGCCTATCACTTTACAACAAATAAAGTATCCAATTCCAATTCCAATTCCAATTTCCAGACGTATTTGGTCCTCTTTTTTAACTTTTC
CTCAAAATG
Protein sequenceShow/hide protein sequence
MVPITNPKAPMNANYVSVKEAKPHHCYPQPLRLRPPPFPSVESEEIQKQKMADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAI
TK