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CmaCh11G004530 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh11G004530
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUBP1-associated proteins 1C-like isoform X3
Genome locationCma_Chr11:2212595..2213167
RNA-Seq ExpressionCmaCh11G004530
SyntenyCmaCh11G004530
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587816.1 hypothetical protein SDJN03_16381, partial [Cucurbita argyrosperma subsp. sororia]7.4e-2489.19Show/hide
Query:  REIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQIVDQSSSRVLLAAPGSCSSLNS
        RE ASRRMLEAE R ELIIEQELSILRATG TEGLAFDEHF MRMLDLRLN IVDQSSSR LLA PGSCSSLNS
Subjt:  REIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQIVDQSSSRVLLAAPGSCSSLNS

XP_008443847.1 PREDICTED: uncharacterized protein LOC103487343 [Cucumis melo]5.3e-2256.2Show/hide
Query:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEG-LAFDEHFPMRMLDLRLNQ
        M+F  RA+DN+    A+S   +SD P++DDS N EL KQRIK +IT REI  RRMLEAE R EL++E+EL+I RA G TEG L+FD  F +R ++  +N+
Subjt:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEG-LAFDEHFPMRMLDLRLNQ

Query:  IVDQSSSRVLLAAPGSCSSLN
        I+D SSS  LLA PGS SSLN
Subjt:  IVDQSSSRVLLAAPGSCSSLN

XP_022926958.1 uncharacterized protein LOC111433915 [Cucurbita moschata]2.5e-4889.26Show/hide
Query:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI
        +DF VRAVDN+PLLAASSSECSSDHPLRDDSPNAELVKQRIK +ITNRE ASRRMLEAE R ELIIEQELSILRATG TEGLAFDEHF MRMLDLRLN I
Subjt:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI

Query:  VDQSSSRVLLAAPGSCSSLNS
        VDQSSSR LLA PGSCSSLNS
Subjt:  VDQSSSRVLLAAPGSCSSLNS

XP_022965220.1 uncharacterized protein LOC111465139 isoform X1 [Cucurbita maxima]7.8e-58100Show/hide
Query:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI
        MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI
Subjt:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI

Query:  VDQSSSRVLLAAPGSCSSLNS
        VDQSSSRVLLAAPGSCSSLNS
Subjt:  VDQSSSRVLLAAPGSCSSLNS

XP_022965226.1 uncharacterized protein LOC111465139 isoform X2 [Cucurbita maxima]2.9e-5295.04Show/hide
Query:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI
        MDFGVRAVDNQPLLAASSSECSSDHPLR      ELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI
Subjt:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI

Query:  VDQSSSRVLLAAPGSCSSLNS
        VDQSSSRVLLAAPGSCSSLNS
Subjt:  VDQSSSRVLLAAPGSCSSLNS

TrEMBL top hitse value%identityAlignment
A0A1S3B9S7 uncharacterized protein LOC1034873432.6e-2256.2Show/hide
Query:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEG-LAFDEHFPMRMLDLRLNQ
        M+F  RA+DN+    A+S   +SD P++DDS N EL KQRIK +IT REI  RRMLEAE R EL++E+EL+I RA G TEG L+FD  F +R ++  +N+
Subjt:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEG-LAFDEHFPMRMLDLRLNQ

Query:  IVDQSSSRVLLAAPGSCSSLN
        I+D SSS  LLA PGS SSLN
Subjt:  IVDQSSSRVLLAAPGSCSSLN

A0A5D3B800 UBP1-associated proteins 1C-like isoform X32.6e-2256.2Show/hide
Query:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEG-LAFDEHFPMRMLDLRLNQ
        M+F  RA+DN+    A+S   +SD P++DDS N EL KQRIK +IT REI  RRMLEAE R EL++E+EL+I RA G TEG L+FD  F +R ++  +N+
Subjt:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEG-LAFDEHFPMRMLDLRLNQ

Query:  IVDQSSSRVLLAAPGSCSSLN
        I+D SSS  LLA PGS SSLN
Subjt:  IVDQSSSRVLLAAPGSCSSLN

A0A6J1EJN4 uncharacterized protein LOC1114339151.2e-4889.26Show/hide
Query:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI
        +DF VRAVDN+PLLAASSSECSSDHPLRDDSPNAELVKQRIK +ITNRE ASRRMLEAE R ELIIEQELSILRATG TEGLAFDEHF MRMLDLRLN I
Subjt:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI

Query:  VDQSSSRVLLAAPGSCSSLNS
        VDQSSSR LLA PGSCSSLNS
Subjt:  VDQSSSRVLLAAPGSCSSLNS

A0A6J1HL44 uncharacterized protein LOC111465139 isoform X21.4e-5295.04Show/hide
Query:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI
        MDFGVRAVDNQPLLAASSSECSSDHPLR      ELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI
Subjt:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI

Query:  VDQSSSRVLLAAPGSCSSLNS
        VDQSSSRVLLAAPGSCSSLNS
Subjt:  VDQSSSRVLLAAPGSCSSLNS

A0A6J1HN47 uncharacterized protein LOC111465139 isoform X13.8e-58100Show/hide
Query:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI
        MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI
Subjt:  MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQI

Query:  VDQSSSRVLLAAPGSCSSLNS
        VDQSSSRVLLAAPGSCSSLNS
Subjt:  VDQSSSRVLLAAPGSCSSLNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCGGGGTCCGAGCCGTCGATAACCAGCCACTCCTTGCCGCTTCCAGTTCCGAATGCTCATCCGATCATCCGCTGCGTGACGATTCTCCAAACGCAGAG
CTCGTGAAACAGAGGATTAAAGGAAAGATAACAAATAGAGAGATTGCAAGCCGTAGAATGCTCGAGGCGGAGACTAGGATGGAGCTCATTATCGAGCAAGAACTA
TCGATTCTTAGGGCTACTGGCTGGACGGAGGGGTTAGCATTTGATGAGCATTTTCCCATGAGAATGTTGGATCTGAGGCTTAATCAGATTGTGGATCAGTCGTCC
TCCAGAGTTTTATTAGCGGCTCCAGGTTCCTGTTCTTCGCTAAACTCGTAG
mRNA sequenceShow/hide mRNA sequence
TTCCATTTAGCTCCACGAATCTCTCCCTTTGCCGTATCGCCTTGTTTCTTCACTCTTTCTCTTCCGTTCTGATGGATTTCGGGGTCCGAGCCGTCGATAACCAGC
CACTCCTTGCCGCTTCCAGTTCCGAATGCTCATCCGATCATCCGCTGCGTGACGATTCTCCAAACGCAGAGCTCGTGAAACAGAGGATTAAAGGAAAGATAACAA
ATAGAGAGATTGCAAGCCGTAGAATGCTCGAGGCGGAGACTAGGATGGAGCTCATTATCGAGCAAGAACTATCGATTCTTAGGGCTACTGGCTGGACGGAGGGGT
TAGCATTTGATGAGCATTTTCCCATGAGAATGTTGGATCTGAGGCTTAATCAGATTGTGGATCAGTCGTCCTCCAGAGTTTTATTAGCGGCTCCAGGTTCCTGTT
CTTCGCTAAACTCGTAG
Protein sequenceShow/hide protein sequence
MDFGVRAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELIIEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQIVDQSS
SRVLLAAPGSCSSLNS