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CmaCh11G006080 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh11G006080
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionATP-dependent RNA helicase DDX11-like protein
Genome locationCma_Chr11:2910187..2910738
RNA-Seq ExpressionCmaCh11G006080
SyntenyCmaCh11G006080
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587958.1 hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sororia]8.1e-9196.2Show/hide
Query:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKA-APPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENR
        MFLLPSISTTKKFFKKT+CNFKSFFSNTYHRLPKA  PPFTAGPEMAKD+VQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRK+QENR
Subjt:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKA-APPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENR

Query:  ESRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI
        ESRSKRS RLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ NKI
Subjt:  ESRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI

XP_022933508.1 uncharacterized protein LOC111440909 [Cucurbita moschata]6.9e-9095.65Show/hide
Query:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKA-APPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENR
        MFLLPSISTTKKFF+KT+CNFKSFFSNTYHRLPKA  PPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRK+QENR
Subjt:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKA-APPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENR

Query:  ESRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI
        ESRSKRS RLYEYDERRVCLVAKKIKELEKLDARNV HSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ NKI
Subjt:  ESRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI

XP_022960595.1 uncharacterized protein LOC111461329 [Cucurbita moschata]5.1e-6171.04Show/hide
Query:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE
        M L  SI+ TKKFF KT+CNFKSFFSNTY RLPKA PPF+ G EM KD     SF K++  NAV FSKT+D+TQM +VEKNE SIKIG THQRK+QEN  
Subjt:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE

Query:  SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI
                L EYDERR+CLVAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYLEIVD FFMD+FAEFC+NSSS Q N I
Subjt:  SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI

XP_022973644.1 uncharacterized protein LOC111472233 [Cucurbita maxima]2.4e-95100Show/hide
Query:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE
        MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE
Subjt:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE

Query:  SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI
        SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI
Subjt:  SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI

XP_023515883.1 uncharacterized protein LOC111779922 [Cucurbita pepo subsp. pepo]3.9e-6171.58Show/hide
Query:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE
        M L  SIS TKKFF KT+CN KSFFSNTY RLPKAAPPF+ G EM KD     SF K++  NAVHFSKTID+TQM +VEKNE SIKIG THQRK+QEN  
Subjt:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE

Query:  SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI
                L EYDERR+C VAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYLEIVD FFMD+FAEFC+N SS Q N I
Subjt:  SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI

TrEMBL top hitse value%identityAlignment
A0A6J1CV44 uncharacterized protein LOC1110145442.1e-5264.74Show/hide
Query:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKD----------EVQNGSFTKSNGNNAVHFSKTIDKTQMD--RVEKNEQSI-KI
        M L  SIS TKKFFKKTICNFKSFFS +YHRLPK  PPF AGP M KD          EVQ+G F K+N +NA+HF   +++TQM+   V+K+  S+  I
Subjt:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKD----------EVQNGSFTKSNGNNAVHFSKTIDKTQMD--RVEKNEQSI-KI

Query:  GATHQRKSQENRESRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSS
        GATHQRK QENR+   + S   Y  DERR+CLVAKKIKELEKLD+RNVDH+LDIEEILHYYSRLTCP YLEIVD FF ++FAEF +NSSS
Subjt:  GATHQRKSQENRESRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSS

A0A6J1F4Y2 uncharacterized protein LOC1114409093.3e-9095.65Show/hide
Query:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKA-APPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENR
        MFLLPSISTTKKFF+KT+CNFKSFFSNTYHRLPKA  PPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRK+QENR
Subjt:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKA-APPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENR

Query:  ESRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI
        ESRSKRS RLYEYDERRVCLVAKKIKELEKLDARNV HSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ NKI
Subjt:  ESRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI

A0A6J1H9I9 uncharacterized protein LOC1114613292.5e-6171.04Show/hide
Query:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE
        M L  SI+ TKKFF KT+CNFKSFFSNTY RLPKA PPF+ G EM KD     SF K++  NAV FSKT+D+TQM +VEKNE SIKIG THQRK+QEN  
Subjt:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE

Query:  SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI
                L EYDERR+CLVAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYLEIVD FFMD+FAEFC+NSSS Q N I
Subjt:  SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI

A0A6J1IF62 uncharacterized protein LOC1114722331.2e-95100Show/hide
Query:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE
        MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE
Subjt:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE

Query:  SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI
        SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI
Subjt:  SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI

A0A6J1JFL9 uncharacterized protein LOC1114852921.0e-5467.76Show/hide
Query:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE
        M L  SIS+TKKFF KT+CNFKSFFSNTY RLPK          M KD     SF K++  NAVHFSKTI +TQM +VEKNE SIKIGATHQRK+QEN  
Subjt:  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRE

Query:  SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI
                L  YDERR+CLVAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYL+IVD FFMD+FAEFC+N SS Q N I
Subjt:  SRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15260.1 unknown protein2.3e-1129.94Show/hide
Query:  SISTTKKFFKKTICNFKS-FFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRESRSK
        SI    +F KKT+ + KS   S+ Y  LP   P     P          S T++  +  V    T                    THQ+      + + K
Subjt:  SISTTKKFFKKTICNFKS-FFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRESRSK

Query:  RSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHN
        +    +E  ++R   +A+K+K+L  +D R+VDH+LD+ E L  YS +  P YL+IVD FF DM+ EF    +S++ N
Subjt:  RSRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHN

AT3G16070.1 unknown protein2.4e-0828.22Show/hide
Query:  TKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSN---GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRESRSKRS
        T  FF +T+ + KS       +LP+    F+             +F +SN   G+N   ++  ++  + D     E  +K+   H+ + QE +  + K++
Subjt:  TKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSN---GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRESRSKRS

Query:  RRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFA
             Y  R    + KKI E+   +  +++ +LD+EE LHYYSR++ P YL IVD FF D+++
Subjt:  RRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFA

AT3G24535.1 unknown protein8.0e-1233.52Show/hide
Query:  MFLLPSISTTKKFFKKTICNFKSFFSN--TYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQEN
        M L  SIS T+K F+KTI NFKSFF N  TYH+LPK   P      +  D   +   T S  ++++H  K       D V  N+ S     + Q +  + 
Subjt:  MFLLPSISTTKKFFKKTICNFKSFFSN--TYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQEN

Query:  RESRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNV----DHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCS
         E+          + + +V LV  K+KE+EK+   ++     +  D+ E LH YSRL    YL++V+ FFM+++++F S
Subjt:  RESRSKRSRRLYEYDERRVCLVAKKIKELEKLDARNV----DHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTACTACCCTCCATTTCCACCACCAAAAAATTCTTCAAAAAAACCATATGTAACTTCAAATCTTTCTTCTCCAACACCTACCATCGCCTACCCAAGGCG
GCGCCGCCCTTCACCGCCGGCCCCGAAATGGCTAAAGATGAGGTCCAAAATGGAAGCTTTACGAAGAGTAATGGCAACAATGCAGTTCATTTTTCGAAGACGATC
GACAAGACCCAGATGGACAGAGTTGAAAAAAATGAACAGAGCATCAAAATTGGAGCGACCCATCAAAGGAAATCCCAAGAAAACAGGGAATCGAGGTCGAAGAGG
AGTCGTAGGTTGTACGAGTACGATGAGAGGAGAGTGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAAAAATTAGACGCGAGAAATGTGGATCATAGTTTGGAT
ATTGAAGAGATCCTTCATTACTACTCTCGCCTCACTTGTCCAACATACCTCGAAATTGTGGACACATTCTTCATGGACATGTTCGCTGAATTCTGTTCTAACTCC
TCGTCTTCTCAACACAACAAAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCTACTACCCTCCATTTCCACCACCAAAAAATTCTTCAAAAAAACCATATGTAACTTCAAATCTTTCTTCTCCAACACCTACCATCGCCTACCCAAGGCG
GCGCCGCCCTTCACCGCCGGCCCCGAAATGGCTAAAGATGAGGTCCAAAATGGAAGCTTTACGAAGAGTAATGGCAACAATGCAGTTCATTTTTCGAAGACGATC
GACAAGACCCAGATGGACAGAGTTGAAAAAAATGAACAGAGCATCAAAATTGGAGCGACCCATCAAAGGAAATCCCAAGAAAACAGGGAATCGAGGTCGAAGAGG
AGTCGTAGGTTGTACGAGTACGATGAGAGGAGAGTGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAAAAATTAGACGCGAGAAATGTGGATCATAGTTTGGAT
ATTGAAGAGATCCTTCATTACTACTCTCGCCTCACTTGTCCAACATACCTCGAAATTGTGGACACATTCTTCATGGACATGTTCGCTGAATTCTGTTCTAACTCC
TCGTCTTCTCAACACAACAAAATTTGA
Protein sequenceShow/hide protein sequence
MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRESRSKR
SRRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQHNKI