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CmaCh11G006880 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh11G006880
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionWD repeat containing protein
Genome locationCma_Chr11:3345253..3347905
RNA-Seq ExpressionCmaCh11G006880
SyntenyCmaCh11G006880
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588036.1 hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sororia]8.4e-6398.41Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
        MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQME+DEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN

Query:  IPEDQHQKPFHWIVDGWREKTGSSKK
        I EDQHQKPFHWIVDGWREKTGSSKK
Subjt:  IPEDQHQKPFHWIVDGWREKTGSSKK

XP_004135711.1 uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus]1.2e-3265.35Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTE
        M DPRA L S SS   LPPND LP+RFKV+WRVLLISNFALSAYMFASARK            +   QLEND +EK SDSEI+ EIPST MVDTTGIVTE
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTE

Query:  NIPEDQHQKPFHWIVDGWREKTGSSKK
        N+ EDQ Q+P   +V GWREK G S+K
Subjt:  NIPEDQHQKPFHWIVDGWREKTGSSKK

XP_022926648.1 uncharacterized protein LOC111433716 [Cucurbita moschata]4.6e-6196.83Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
        MADPRASLSSLSSPPSL PNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQME++EAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN

Query:  IPEDQHQKPFHWIVDGWREKTGSSKK
        I EDQHQKPFHWIVDGWREKTGSSKK
Subjt:  IPEDQHQKPFHWIVDGWREKTGSSKK

XP_022968528.1 uncharacterized protein LOC111467730 isoform X1 [Cucurbita maxima]4.5e-64100Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
        MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN

Query:  IPEDQHQKPFHWIVDGWREKTGSSKK
        IPEDQHQKPFHWIVDGWREKTGSSKK
Subjt:  IPEDQHQKPFHWIVDGWREKTGSSKK

XP_023530326.1 uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo]4.2e-6297.62Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
        MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQME+DEAEKDLGQLENDGIEKCSDSEIMEIPST MVDTTGIVTEN
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN

Query:  IPEDQHQKPFHWIVDGWREKTGSSKK
        I EDQHQKPFHWIVDGWREKTGSSKK
Subjt:  IPEDQHQKPFHWIVDGWREKTGSSKK

TrEMBL top hitse value%identityAlignment
A0A0A0M1X9 Uncharacterized protein5.7e-3365.35Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTE
        M DPRA L S SS   LPPND LP+RFKV+WRVLLISNFALSAYMFASARK            +   QLEND +EK SDSEI+ EIPST MVDTTGIVTE
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTE

Query:  NIPEDQHQKPFHWIVDGWREKTGSSKK
        N+ EDQ Q+P   +V GWREK G S+K
Subjt:  NIPEDQHQKPFHWIVDGWREKTGSSKK

A0A1S3BR82 uncharacterized protein LOC1034923204.5e-3061.42Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTE
        M   R  L S SS   LPPND LP+RFKV+WR+LLISNFALSAYMFASARK            +   +LEND +EK SDSEI+ EIPST MVDTTGIVTE
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTE

Query:  NIPEDQHQKPFHWIVDGWREKTGSSKK
        N+ EDQ Q+P   +V GWREK G S+K
Subjt:  NIPEDQHQKPFHWIVDGWREKTGSSKK

A0A6J1D315 uncharacterized protein LOC1110165445.6e-2863.48Show/hide
Query:  MADPRASL-SSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVT
        M DPRA L SS S PP LPPND LPRRFKV+WRVLLISNFAL+AYMFA+ARKKDLG+ME D             +EK SD E+M  IPST MVDTT I  
Subjt:  MADPRASL-SSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVT

Query:  ENIPEDQHQKPFHWI
        ENI ED  ++PF W+
Subjt:  ENIPEDQHQKPFHWI

A0A6J1EIP0 uncharacterized protein LOC1114337162.2e-6196.83Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
        MADPRASLSSLSSPPSL PNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQME++EAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN

Query:  IPEDQHQKPFHWIVDGWREKTGSSKK
        I EDQHQKPFHWIVDGWREKTGSSKK
Subjt:  IPEDQHQKPFHWIVDGWREKTGSSKK

A0A6J1HYA0 uncharacterized protein LOC111467730 isoform X12.2e-64100Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
        MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN

Query:  IPEDQHQKPFHWIVDGWREKTGSSKK
        IPEDQHQKPFHWIVDGWREKTGSSKK
Subjt:  IPEDQHQKPFHWIVDGWREKTGSSKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACCCACGAGCATCACTGTCATCTCTATCTTCACCGCCGTCTTTGCCTCCCAATGATCAGCTACCCAGACGCTTCAAGGTCGTCTGGCGCGTTCTACTG
ATCTCCAATTTCGCCCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAAAGATTTGGGGCAAATGGAGAGTGATGAAGCAGAAAAAGATTTGGGTCAACTGGAA
AATGATGGAATAGAAAAATGCAGTGATAGTGAAATAATGGAAATACCCTCAACGTTTATGGTGGATACCACTGGCATAGTTACAGAGAACATCCCGGAAGATCAG
CACCAAAAACCATTCCATTGGATTGTTGATGGTTGGAGAGAAAAAACAGGTTCGAGTAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
TACAAGGGGGCGTTGCTTGGCGCGCACACGAAGACCGAGTCAAAGCTGCCATCGCCAAGCTACCCAATTTCGCCACTTTCAATGGCAGACCCACGAGCATCACTG
TCATCTCTATCTTCACCGCCGTCTTTGCCTCCCAATGATCAGCTACCCAGACGCTTCAAGGTCGTCTGGCGCGTTCTACTGATCTCCAATTTCGCCCTTTCAGCC
TACATGTTTGCAAGTGCAAGGAAGAAAGATTTGGGGCAAATGGAGAGTGATGAAGCAGAAAAAGATTTGGGTCAACTGGAAAATGATGGAATAGAAAAATGCAGT
GATAGTGAAATAATGGAAATACCCTCAACGTTTATGGTGGATACCACTGGCATAGTTACAGAGAACATCCCGGAAGATCAGCACCAAAAACCATTCCATTGGATT
GTTGATGGTTGGAGAGAAAAAACAGGTTCGAGTAAAAAATGAATTGGTAGGTTAGAAGCTGATTCTTGAACGGCTCAATGTTCATCCTCTCAAAACTGATTTGAT
TAGAGCTCATCCAGGTAAATATGTTATTTCAGGAGACTGATTCTTGTAGTGAAACCTTCATTAACCCGGATATCTTCTTGTAGAACTTTTACAGATTTGATTAAC
TGTTTAATGACGATTCAAGAGATAATCTCTGCTCTCTAAAGTTTGATTCAATGTTTGTATTTCATATTTTGATTAATTGGGCTGTTGTTGATAAACTAGTTGTAT
CTTGTGTTTTGGTTATATGTGTT
Protein sequenceShow/hide protein sequence
MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTENIPEDQ
HQKPFHWIVDGWREKTGSSKK