; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh11G008560 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh11G008560
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionProline-tRNA ligase
Genome locationCma_Chr11:4329515..4331522
RNA-Seq ExpressionCmaCh11G008560
SyntenyCmaCh11G008560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER40785.1 proline-tRNA ligase [Striga asiatica]1.7e-1561.84Show/hide
Query:  MLRKKSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI
        MLR+KS VES W AVGTG GA+L TSASP A+C    PS D  A  LLLKGT  R VT SG+I GR D+E G IG+
Subjt:  MLRKKSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI

KAE8728381.1 hypothetical protein F3Y22_tig00004502pilonHSYRG00033 [Hibiscus syriacus]4.2e-1165.57Show/hide
Query:  GTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI
        GTGQGA+LH  ASPAAN F SFPS  A A  LLL  T I  VT SG+I+GRND ECG IG+
Subjt:  GTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI

MCI21992.1 hypothetical protein [Trifolium medium]9.4e-1964.71Show/hide
Query:  KSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI--LPQNRRIRKGV
        KS VES   AVGTGQGAML T+ASP ANCFLS PS DAHA  LLL GTC   VT SGNI G  DKECG IG+  +P   R + GV
Subjt:  KSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI--LPQNRRIRKGV

PON89144.1 hypothetical protein TorRG33x02_150070 [Trema orientale]6.7e-2578.95Show/hide
Query:  MLRKKSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI
        MLRKKS VES  HAVGTGQGA+LHTSASP  NCFLS PS DAHA  LLLKGTC RI T SGNI+GRNDKECG IG+
Subjt:  MLRKKSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI

TrEMBL top hitse value%identityAlignment
A0A2P5EUC5 Uncharacterized protein3.3e-2578.95Show/hide
Query:  MLRKKSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI
        MLRKKS VES  HAVGTGQGA+LHTSASP  NCFLS PS DAHA  LLLKGTC RI T SGNI+GRNDKECG IG+
Subjt:  MLRKKSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI

A0A392QDQ8 Uncharacterized protein (Fragment)4.6e-1964.71Show/hide
Query:  KSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI--LPQNRRIRKGV
        KS VES   AVGTGQGAML T+ASP ANCFLS PS DAHA  LLL GTC   VT SGNI G  DKECG IG+  +P   R + GV
Subjt:  KSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI--LPQNRRIRKGV

A0A5A7Q6A6 Proline-tRNA ligase8.0e-1661.84Show/hide
Query:  MLRKKSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI
        MLR+KS VES W AVGTG GA+L TSASP A+C    PS D  A  LLLKGT  R VT SG+I GR D+E G IG+
Subjt:  MLRKKSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI

A0A7C9CFB7 Uncharacterized protein6.1e-2475Show/hide
Query:  MLRKKSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI
        MLR+KS VES WHAVGTGQGAML  SASP ANCFLS PS DAHA PLLL G C   VTYSGNI GRN++E GHIG+
Subjt:  MLRKKSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI

A0A7C9CLC4 Uncharacterized protein3.6e-1659.21Show/hide
Query:  MLRKKSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI
        ML KKS VES WHA+GTG  AMLH  ASP A+ F S PS D  A  LLL G C   VT SGNI GR ++ECG +G+
Subjt:  MLRKKSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCGCAAGAAGTCGTTTGTCGAGTCTGCCTGGCACGCTGTAGGCACTGGCCAAGGTGCCATGCTGCATACAAGTGCATCTCCTGCTGCCAATTGTTTCCTG
TCCTTCCCATCGAAGGATGCCCATGCATGCCCCCTGCTATTGAAAGGTACTTGTATACGTATTGTTACGTATTCTGGAAATATCAAGGGTCGAAACGACAAGGAG
TGTGGGCATATCGGAATACTTCCTCAGAATCGAAGGATACGAAAAGGAGTCATGAAACCGAGAGACCCTAAAGAAAACGGAACAAGTGGAGGAACTGGTCCTTTA
AACATTGATGCTGCCTGCAATCAATTCAATGCCACCAAAAGGAAGTATGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCGCAAGAAGTCGTTTGTCGAGTCTGCCTGGCACGCTGTAGGCACTGGCCAAGGTGCCATGCTGCATACAAGTGCATCTCCTGCTGCCAATTGTTTCCTG
TCCTTCCCATCGAAGGATGCCCATGCATGCCCCCTGCTATTGAAAGGTACTTGTATACGTATTGTTACGTATTCTGGAAATATCAAGGGTCGAAACGACAAGGAG
TGTGGGCATATCGGAATACTTCCTCAGAATCGAAGGATACGAAAAGGAGTCATGAAACCGAGAGACCCTAAAGAAAACGGAACAAGTGGAGGAACTGGTCCTTTA
AACATTGATGCTGCCTGCAATCAATTCAATGCCACCAAAAGGAAGTATGCATGA
Protein sequenceShow/hide protein sequence
MLRKKSFVESAWHAVGTGQGAMLHTSASPAANCFLSFPSKDAHACPLLLKGTCIRIVTYSGNIKGRNDKECGHIGILPQNRRIRKGVMKPRDPKENGTSGGTGPL
NIDAACNQFNATKRKYA