; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh11G011990 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh11G011990
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description26S proteasome regulatory subunit 6A homolog
Genome locationCma_Chr11:7131881..7133988
RNA-Seq ExpressionCmaCh11G011990
SyntenyCmaCh11G011990
Gene Ontology termsGO:0019538 - protein metabolic process (biological process)
GO:0005622 - intracellular (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8706440.1 26S protease regulatory subunit 6A-like protein [Hibiscus syriacus]8.2e-1846.34Show/hide
Query:  EEDQLASLTTDRIIPASRLLENEIRIFK--------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYFF
        EEDQLAS+TTD I+ ASRLL+NEIRI K                                      ILEMNPEDEAEE            +   + L   
Subjt:  EEDQLASLTTDRIIPASRLLENEIRIFK--------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYFF

Query:  RDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
        R      +    +QTIFLPVVG+VD +KLKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  RDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK

XP_022136131.1 26S proteasome regulatory subunit 6A homolog [Momordica charantia]4.8e-1846.39Show/hide
Query:  LEEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLY
        LEEDQLAS+TTD II ASRLL+NEIRI K                                       ILEMNPEDEAEE            +   + L 
Subjt:  LEEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLY

Query:  FFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
          R      +    +QTIFLPVVG++D +KLKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  FFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK

XP_022746762.1 26S proteasome regulatory subunit 6A homolog isoform X2 [Durio zibethinus]3.8e-2360.32Show/hide
Query:  EEDQLASLTTDRIIPASRLLENEIRIFKILEMNPEDEAEEMVQILILTRKAIENVLLVLYFFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV---
        EEDQL S+TTD II ASRLL+NEIRI KILEMNPEDEAEE            +   + L   R      +    +QTIFLPVVG+VD +KLKPGDLV   
Subjt:  EEDQLASLTTDRIIPASRLLENEIRIFKILEMNPEDEAEEMVQILILTRKAIENVLLVLYFFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV---

Query:  -DSYLILDTLPSGYDSR-QAMDVDEK
         DSYLILDTLPS YDSR +AM+VDEK
Subjt:  -DSYLILDTLPSGYDSR-QAMDVDEK

XP_038880104.1 26S proteasome regulatory subunit 6A homolog [Benincasa hispida]3.7e-1846.99Show/hide
Query:  LEEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLY
        LEEDQLAS+TTD II ASRLL+NEIRI K                                       ILEMNPEDEAEE            +   + L 
Subjt:  LEEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLY

Query:  FFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
          R      +    +QTIFLPVVG+VD +KLKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  FFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK

XP_038977280.1 26S proteasome regulatory subunit 6A homolog A-like [Phoenix dactylifera]6.3e-1854.76Show/hide
Query:  EEDQLASLTTDRIIPASRLLENEIRIFKILEMNPEDEAEEMVQILILTRKAIENVLLVLYFFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV---
        E+D+LAS+TTD I  ASRLL+NEIR   IL+MNPED  EE            + V + +   R      +    +QTIFLPVVG+VD +KLKPGDLV   
Subjt:  EEDQLASLTTDRIIPASRLLENEIRIFKILEMNPEDEAEEMVQILILTRKAIENVLLVLYFFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV---

Query:  -DSYLILDTLPSGYDSR-QAMDVDEK
         DSYLILDTLPS YDSR +AM+VDEK
Subjt:  -DSYLILDTLPSGYDSR-QAMDVDEK

TrEMBL top hitse value%identityAlignment
A0A5D3CEH3 26S protease regulatory subunit 6A-like protein5.2e-1846.39Show/hide
Query:  LEEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLY
        LEEDQLAS+TT+ II ASRLL+NEIRI K                                       ILEMNPEDEAEE            +   + L 
Subjt:  LEEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLY

Query:  FFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
          R      +    +QTIFLPVVG+VD +KLKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  FFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK

A0A6A3AP97 26S protease regulatory subunit 6A-like protein4.0e-1846.34Show/hide
Query:  EEDQLASLTTDRIIPASRLLENEIRIFK--------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYFF
        EEDQLAS+TTD I+ ASRLL+NEIRI K                                      ILEMNPEDEAEE            +   + L   
Subjt:  EEDQLASLTTDRIIPASRLLENEIRIFK--------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYFF

Query:  RDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
        R      +    +QTIFLPVVG+VD +KLKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  RDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK

A0A6J1C2N5 26S proteasome regulatory subunit 6A homolog2.3e-1846.39Show/hide
Query:  LEEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLY
        LEEDQLAS+TTD II ASRLL+NEIRI K                                       ILEMNPEDEAEE            +   + L 
Subjt:  LEEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLY

Query:  FFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
          R      +    +QTIFLPVVG++D +KLKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  FFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK

A0A6P5Z2C2 26S proteasome regulatory subunit 6A homolog isoform X21.8e-2360.32Show/hide
Query:  EEDQLASLTTDRIIPASRLLENEIRIFKILEMNPEDEAEEMVQILILTRKAIENVLLVLYFFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV---
        EEDQL S+TTD II ASRLL+NEIRI KILEMNPEDEAEE            +   + L   R      +    +QTIFLPVVG+VD +KLKPGDLV   
Subjt:  EEDQLASLTTDRIIPASRLLENEIRIFKILEMNPEDEAEEMVQILILTRKAIENVLLVLYFFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV---

Query:  -DSYLILDTLPSGYDSR-QAMDVDEK
         DSYLILDTLPS YDSR +AM+VDEK
Subjt:  -DSYLILDTLPSGYDSR-QAMDVDEK

A0A7J7D193 26S protease regulatory subunit 6A5.2e-1846.06Show/hide
Query:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF
        EEDQLAS+TTD I+ ASRLL+NEIRI K                                       ILEMNPEDEAEE            +   + L  
Subjt:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF

Query:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
         R      +    +QTIFLPVVG+VD +KLKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK

SwissProt top hitse value%identityAlignment
O04019 26S proteasome regulatory subunit 6A homolog B5.5e-1743.64Show/hide
Query:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF
        E DQLAS+TTD I  ASRLL NEIRI K                                       ILEM+PED+AEE            +   + L  
Subjt:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF

Query:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
         R      +    +QTIFLPVVG+VD + LKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK

O23894 26S proteasome regulatory subunit 6A homolog1.0e-1843.64Show/hide
Query:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF
        EEDQLAS++T+ I+ A+RLLENEIRI K                                       ILEMNPED+AEE            +   + L  
Subjt:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF

Query:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
         R      +    +QTIFLPVVG+VD + LKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK

P46465 26S proteasome regulatory subunit 6A homolog1.1e-1741.21Show/hide
Query:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF
        ++DQLAS++T+ I+ A+RLL+NE R+ K                                       ILEMNPEDEAEE            +   + L  
Subjt:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF

Query:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
         R      +    +QTIFLPV+G+VD  KLKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK

P54776 26S proteasome regulatory subunit 6A homolog2.5e-1742.42Show/hide
Query:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF
        E+DQL +++T+ II ASRLL+NEIRI K                                       ILEMNPE+EAEE            +   + L  
Subjt:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF

Query:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
         R      +    +QTIFLPVVG+VD + LKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK

Q9SEI2 26S proteasome regulatory subunit 6A homolog A6.6e-1843.03Show/hide
Query:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF
        EEDQLAS++T+ I  A+RLL+NEIRI K                                       ILEMNPED+AEE            +   + L  
Subjt:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF

Query:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
         R      +    +QTIFLPVVG+VD + LKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK

Arabidopsis top hitse value%identityAlignment
AT1G09100.1 26S proteasome AAA-ATPase subunit RPT5B3.9e-1843.64Show/hide
Query:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF
        E DQLAS+TTD I  ASRLL NEIRI K                                       ILEM+PED+AEE            +   + L  
Subjt:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF

Query:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
         R      +    +QTIFLPVVG+VD + LKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK

AT3G05530.1 regulatory particle triple-A ATPase 5A4.7e-1943.03Show/hide
Query:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF
        EEDQLAS++T+ I  A+RLL+NEIRI K                                       ILEMNPED+AEE            +   + L  
Subjt:  EEDQLASLTTDRIIPASRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQILILTRKAIENVLLVLYF

Query:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK
         R      +    +QTIFLPVVG+VD + LKPGDLV    DSYLILDTLPS YDSR +AM+VDEK
Subjt:  FRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLV----DSYLILDTLPSGYDSR-QAMDVDEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCCTCGAAGAAGACCAGTTGGCTTCATTGACCACAGATCGCATCATTCCAGCTTCTCGTCTTCTAGAAAACGAGATTCGGATCTTCAAGATTCTGGAAATGAA
CCCAGAAGATGAAGCTGAAGAGATGGTGCAAATATTGATCTTGACTCGCAAAGCAATTGAAAATGTGTTGCTGGTGCTTTACTTCTTTAGGGATCAGGTTATGTATGCCA
TTTTGTACATATTCAAACAGACAATCTTTTTACCTGTTGTTGGGATTGTTGATTCCAACAAATTAAAACCTGGTGATTTAGTTGACAGTTACCTGATCTTGGACACTCTA
CCATCTGGGTACGATTCTAGACAGGCAATGGACGTTGATGAAAAACATTAG
mRNA sequenceShow/hide mRNA sequence
AAACTCATTTATCCCTTTCTGAAGATCGGTTGATGAAATTTTCTCCTTCAGTTTTTGTGAGCTCAGGCGATTCCACTCGAAATGGCGATCCTCGAAGAAGACCAGTTGGC
TTCATTGACCACAGATCGCATCATTCCAGCTTCTCGTCTTCTAGAAAACGAGATTCGGATCTTCAAGATTCTGGAAATGAACCCAGAAGATGAAGCTGAAGAGATGGTGC
AAATATTGATCTTGACTCGCAAAGCAATTGAAAATGTGTTGCTGGTGCTTTACTTCTTTAGGGATCAGGTTATGTATGCCATTTTGTACATATTCAAACAGACAATCTTT
TTACCTGTTGTTGGGATTGTTGATTCCAACAAATTAAAACCTGGTGATTTAGTTGACAGTTACCTGATCTTGGACACTCTACCATCTGGGTACGATTCTAGACAGGCAAT
GGACGTTGATGAAAAACATTAGAGGGTTGGAGAAGCAGGCAAGTCTCTAGCTTTCTCTAGGCATGCCTTATATGAACAATGAACATGCATTTGTTTTGGTCACATAATTG
AGCATTGATCTACCCATTTATCATACAATTCCACACATCTTTTTATGCATAACTTTAATTTTAGACCATAAAATTCAATTTCAGTGATTTGAAGTTGAATGTATAATTTG
AATCGTGTTATCTTCTTATTCTTCGTGTTATTTTACTTGCCTATTCTTCG
Protein sequenceShow/hide protein sequence
MAILEEDQLASLTTDRIIPASRLLENEIRIFKILEMNPEDEAEEMVQILILTRKAIENVLLVLYFFRDQVMYAILYIFKQTIFLPVVGIVDSNKLKPGDLVDSYLILDTL
PSGYDSRQAMDVDEKH