; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh11G014130 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh11G014130
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRNase H domain-containing protein
Genome locationCma_Chr11:9283000..9289153
RNA-Seq ExpressionCmaCh11G014130
SyntenyCmaCh11G014130
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588976.1 hypothetical protein SDJN03_17541, partial [Cucurbita argyrosperma subsp. sororia]1.5e-17298.39Show/hide
Query:  ITPSPTLCFSAQFLRHCHSFHFFRMEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDL
        ITPSPTLCFSAQFLRHCHSFHFFRMEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDL
Subjt:  ITPSPTLCFSAQFLRHCHSFHFFRMEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDL

Query:  FGKLLACPYEQPSSTRGKMAEEYPKAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTI
        FGKLLACPYE+PSSTRGKMAEEYPKAKRQRNVENTESGFV AD+VSTDS KQEITRDH SEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTI
Subjt:  FGKLLACPYEQPSSTRGKMAEEYPKAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTI

Query:  CRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLR
        CRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLR
Subjt:  CRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLR

Query:  DGIVVEDCKHK
        DGIVVEDCKHK
Subjt:  DGIVVEDCKHK

KAG7015252.1 hypothetical protein SDJN02_22886 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-14794.43Show/hide
Query:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP
        MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYE+PSSTRGKMAEEYP
Subjt:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP

Query:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL
        KAKRQRNVENTESGFV AD+VSTDS KQEITRDH SEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL
Subjt:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL

Query:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK
        KHALKSGFKHIS           VQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK
Subjt:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK

XP_022928161.1 uncharacterized protein LOC111435064 [Cucurbita moschata]7.3e-15697.91Show/hide
Query:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP
        MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRG+MAEEYP
Subjt:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP

Query:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL
        KAKRQRNVENTESGFV AD+VSTDS KQEITRDH SEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL
Subjt:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL

Query:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK
        KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAI+LRDGIVVEDCKHK
Subjt:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK

XP_022989146.1 uncharacterized protein LOC111486303 [Cucurbita maxima]4.9e-160100Show/hide
Query:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP
        MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP
Subjt:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP

Query:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL
        KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL
Subjt:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL

Query:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK
        KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK
Subjt:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK

XP_023529762.1 uncharacterized protein LOC111792488 [Cucurbita pepo subsp. pepo]3.9e-15798.26Show/hide
Query:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP
        MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGL+SATYSISAANVTNDLFGKLLACPYEQPSST GKMAEEYP
Subjt:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP

Query:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL
        KAKRQRNVENTESGFV  D+VSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL
Subjt:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL

Query:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK
        KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK
Subjt:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK

TrEMBL top hitse value%identityAlignment
A0A0A0LHV8 RNase H domain-containing protein2.3e-10772.32Show/hide
Query:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLAC-PYEQPSSTRGKMAEEY
        MEGDKDAYYVV KGDVFGFYR+ KEL    G   FDP+ATIYKGYHLSKE+E+YL +HGL+SATYSISAANVT DLFGK+L C PYEQPS+TRGKMAEEY
Subjt:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLAC-PYEQPSSTRGKMAEEY

Query:  PKAKRQRNV-ENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVIL
         KA+RQ  V ENTE                                  YFLEFDGASKGNPGLAGAGAVLRANDG+T+C+LQEGVGIAT NVAEYRAVIL
Subjt:  PKAKRQRNV-ENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVIL

Query:  GLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK
        GLKHALK+G KHI V+GDSKLVCMQVQGLWKLKN NMA  CKVAK+LKDKFVSFEI+H PR+QNSDADALAN AI L+DG+VVEDC HK
Subjt:  GLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK

A0A1S3B7N6 uncharacterized protein LOC103487060 isoform X17.0e-11274.05Show/hide
Query:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLAC-PYEQPSSTRGKMAEEY
        MEGDKDAYYVV+KGDVFGFYRS KEL  Q G   FDPNATIYKGYHLSKE+E+YL SHGL+SATYSISAANVT DLFGK+L C PYEQPS+TRGKMAEEY
Subjt:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLAC-PYEQPSSTRGKMAEEY

Query:  PKAKRQRNV-ENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVIL
        PKA+RQ  V +NTE                                  YFLEFDGASKGNPGLAGAGA+LRANDG+T+CRLQEGVGIAT NVAEYRA+IL
Subjt:  PKAKRQRNV-ENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVIL

Query:  GLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK
        GLKHALK+G KHI V+GDSKLVCMQVQGLWKLKNQNMA LCKVAK+LKDKFVSFEI+H+PR +NSDADALANRAI+L+DG+VVEDC HK
Subjt:  GLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK

A0A6J1D7M4 uncharacterized protein LOC1110183844.7e-11663.27Show/hide
Query:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP
        MEGDKDAYYVV+KG V GFY+S KE EAQ G  IFDPNATIYKGYHLSKE+EQYLASHGL+SATYSISAANVT DLFGKLLAC YEQPSS RG+  EE  
Subjt:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP

Query:  KAKRQRNVEN-TESGFVDADMVSTDSPKQEITRDHGSEAVPASS--------------------------------------------------------
         A R   V    E GFV A+ VSTDSPKQEI  DHG EAVPASS                                                        
Subjt:  KAKRQRNVEN-TESGFVDADMVSTDSPKQEITRDHGSEAVPASS--------------------------------------------------------

Query:  -----------------------------SRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVR
                                     S+ YFLEFDGASKGNPGLAGAGAVLRA DG+T+CRLQEGVGIATNNVAEYRAVILGLKHALK+GFKHI V+
Subjt:  -----------------------------SRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVR

Query:  GDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK
        GDSKLVCMQVQGLWK+KN NM  LCKVAK+LKDKF SFEI+HIPREQNSDADALANRAI+LRDG+VVEDCKHK
Subjt:  GDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK

A0A6J1EJI9 uncharacterized protein LOC1114350643.5e-15697.91Show/hide
Query:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP
        MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRG+MAEEYP
Subjt:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP

Query:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL
        KAKRQRNVENTESGFV AD+VSTDS KQEITRDH SEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL
Subjt:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL

Query:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK
        KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAI+LRDGIVVEDCKHK
Subjt:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK

A0A6J1JJ82 uncharacterized protein LOC1114863032.4e-160100Show/hide
Query:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP
        MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP
Subjt:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP

Query:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL
        KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL
Subjt:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL

Query:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK
        KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK
Subjt:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK

SwissProt top hitse value%identityAlignment
P54162 14.7 kDa ribonuclease H-like protein8.2e-0934.92Show/hide
Query:  DGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVS
        DGAS GNPG +G G  ++         +   +G+ TN  AE+ A+I G+K     G++ +S R DS +V  +   L  +KN       +    LK  F  
Subjt:  DGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVS

Query:  FEINHIPREQNSDADALANRAIYLRD
        F I  IP +QN  AD LA  AI L +
Subjt:  FEINHIPREQNSDADALANRAIYLRD

P64956 Uncharacterized protein Mb2253c1.8e-1943.65Show/hide
Query:  LEFDGASKGNPGLAGAGAVL-RANDGTTICRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKD
        +E DG S+GNPG AG GAV+  A+  T +   ++ +G ATNNVAEYR +I GL  A+K G    +V  DSKLV  Q+ G WK+K+ ++  L   A+ L  
Subjt:  LEFDGASKGNPGLAGAGAVL-RANDGTTICRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKD

Query:  KFVSFEINHIPREQNSDADALANRAI
        +F       +PR +N+ AD LAN A+
Subjt:  KFVSFEINHIPREQNSDADALANRAI

P9WLH4 Uncharacterized protein MT22871.8e-1943.65Show/hide
Query:  LEFDGASKGNPGLAGAGAVL-RANDGTTICRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKD
        +E DG S+GNPG AG GAV+  A+  T +   ++ +G ATNNVAEYR +I GL  A+K G    +V  DSKLV  Q+ G WK+K+ ++  L   A+ L  
Subjt:  LEFDGASKGNPGLAGAGAVL-RANDGTTICRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKD

Query:  KFVSFEINHIPREQNSDADALANRAI
        +F       +PR +N+ AD LAN A+
Subjt:  KFVSFEINHIPREQNSDADALANRAI

P9WLH5 Bifunctional protein Rv2228c1.8e-1943.65Show/hide
Query:  LEFDGASKGNPGLAGAGAVL-RANDGTTICRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKD
        +E DG S+GNPG AG GAV+  A+  T +   ++ +G ATNNVAEYR +I GL  A+K G    +V  DSKLV  Q+ G WK+K+ ++  L   A+ L  
Subjt:  LEFDGASKGNPGLAGAGAVL-RANDGTTICRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKD

Query:  KFVSFEINHIPREQNSDADALANRAI
        +F       +PR +N+ AD LAN A+
Subjt:  KFVSFEINHIPREQNSDADALANRAI

Q9HSF6 Ribonuclease HI2.3e-1943.9Show/hide
Query:  FDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFV
        FDGAS+GNPG A  G VL + DG  +    + +G ATNN AEY A+I  L+ A   GF  I +RGDS+LV  Q+ G W   + ++      A++L   F 
Subjt:  FDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFV

Query:  SFEINHIPREQNSDADALANRAI
         + I H+PR  N  ADALAN A+
Subjt:  SFEINHIPREQNSDADALANRAI

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein2.0e-6645Show/hide
Query:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP
        ++ +KDA++VVRKGDV G Y+   + +AQ GS +FD   ++YKGY L K++E+YL+S GL+   YS+ A+++ +D+FG L  C +++P+    K++E+  
Subjt:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP

Query:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL
         ++ +   +  +   + +  +S D P +++++   S  +   S    F+EFDGASKGNPGL+GA AVL+  DG+ ICR+++G+GIATNN AEY A+ILGL
Subjt:  KAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILGL

Query:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIV
        K+A++ G+K+I V+GDSKLVCMQ++G WK+ ++ +A L K AK L +K VSFEI+H+ R  N+DAD  AN A+ L +G V
Subjt:  KHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIV

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.1e-7248.79Show/hide
Query:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP
        ME +KDA+Y+VRKGD+ G YRS  E + QAGS +  P  ++YKGY   K +E  L+S G+++A +S++A++V +D FGKL+ CP +QPSS++G+   +  
Subjt:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP

Query:  KAKRQRNVENTESGF-----------VDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNN
         +KR +++ + ESG            ++ DM+    P   +TR       P   +    +EFDGASKGNPG AGAGAVLRA+D + +  L+EGVG ATNN
Subjt:  KAKRQRNVENTESGF-----------VDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNN

Query:  VAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDG
        VAEYRA++LGL+ AL  GFK++ V GDS LVCMQVQG WK  +  MA LCK AK+L + F +F+I HI RE+NS+AD  AN AI+L DG
Subjt:  VAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDG

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.1e-7248.79Show/hide
Query:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP
        ME +KDA+Y+VRKGD+ G YRS  E + QAGS +  P  ++YKGY   K +E  L+S G+++A +S++A++V +D FGKL+ CP +QPSS++G+   +  
Subjt:  MEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQPSSTRGKMAEEYP

Query:  KAKRQRNVENTESGF-----------VDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNN
         +KR +++ + ESG            ++ DM+    P   +TR       P   +    +EFDGASKGNPG AGAGAVLRA+D + +  L+EGVG ATNN
Subjt:  KAKRQRNVENTESGF-----------VDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNN

Query:  VAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDG
        VAEYRA++LGL+ AL  GFK++ V GDS LVCMQVQG WK  +  MA LCK AK+L + F +F+I HI RE+NS+AD  AN AI+L DG
Subjt:  VAEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDG

AT5G51080.1 RNase H family protein3.2e-5641.64Show/hide
Query:  DKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQ--PSSTRG--KMAEEY
        +KDA++VVRKGD+ G Y+   + +AQ GS ++DP  ++YKGY L K++E+ L++ GL+   Y   A ++  D+FG L  C ++   PS++    K+AE  
Subjt:  DKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQ--PSSTRG--KMAEEY

Query:  PKAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILG
        P A                                       +S     +EFDGASKGNPGL+GA AVL+  DG+ I ++++G+GIATNN AEY  +ILG
Subjt:  PKAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILG

Query:  LKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIV
        LKHA++ G+  I V+ DSKLVCMQ++G WK+ ++ ++ L K AK L DK +SFEI+H+ R  NSDAD  AN A  L +G V
Subjt:  LKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIV

AT5G51080.2 RNase H family protein3.2e-5641.64Show/hide
Query:  DKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQ--PSSTRG--KMAEEY
        +KDA++VVRKGD+ G Y+   + +AQ GS ++DP  ++YKGY L K++E+ L++ GL+   Y   A ++  D+FG L  C ++   PS++    K+AE  
Subjt:  DKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKLLACPYEQ--PSSTRG--KMAEEY

Query:  PKAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILG
        P A                                       +S     +EFDGASKGNPGL+GA AVL+  DG+ I ++++G+GIATNN AEY  +ILG
Subjt:  PKAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNVAEYRAVILG

Query:  LKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIV
        LKHA++ G+  I V+ DSKLVCMQ++G WK+ ++ ++ L K AK L DK +SFEI+H+ R  NSDAD  AN A  L +G V
Subjt:  LKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGAAGAACTCATCATCACTCCTTCACCAACTCTCTGCTTCTCTGCACAATTTCTCCGCCATTGCCACTCCTTCCATTTCTTCAGAATGGAGGGAGATAAAGATGC
CTATTACGTCGTACGGAAAGGGGATGTTTTTGGATTTTACAGGAGTTTTAAGGAGCTCGAGGCTCAAGCTGGATCTCTGATATTTGATCCTAATGCAACGATCTACAAAG
GGTATCACTTATCTAAAGAATCCGAGCAGTACCTTGCATCACATGGACTTCGAAGTGCAACTTACTCTATAAGTGCTGCTAATGTGACAAACGATCTATTTGGAAAACTA
CTTGCTTGTCCTTATGAGCAACCATCTTCTACTAGAGGAAAAATGGCAGAAGAGTACCCCAAAGCTAAGAGACAACGAAACGTTGAGAATACCGAATCGGGGTTTGTAGA
TGCCGACATGGTCTCAACCGATTCTCCGAAACAAGAAATTACTCGGGATCATGGCTCTGAAGCCGTACCTGCTTCTTCAAGCCGTGTCTATTTTCTTGAGTTTGATGGTG
CCTCAAAGGGAAATCCTGGACTAGCAGGTGCTGGAGCTGTATTACGTGCGAACGATGGAACCACGATCTGTAGGTTGCAAGAAGGGGTTGGGATTGCTACAAATAACGTT
GCTGAATATCGTGCTGTAATATTAGGACTGAAACATGCTCTAAAGAGTGGCTTTAAACACATTTCTGTGCGAGGAGACTCCAAACTCGTTTGTATGCAGGTTCAGGGTCT
ATGGAAGCTCAAAAACCAAAATATGGCTACTTTGTGTAAAGTGGCAAAGGATCTCAAGGATAAGTTTGTGTCATTTGAGATAAACCACATCCCCAGGGAACAAAATTCCG
ACGCCGACGCTCTAGCAAACCGTGCTATATATCTCCGAGATGGCATTGTAGTAGAAGACTGCAAGCATAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGAAGAACTCATCATCACTCCTTCACCAACTCTCTGCTTCTCTGCACAATTTCTCCGCCATTGCCACTCCTTCCATTTCTTCAGAATGGAGGGAGATAAAGATGC
CTATTACGTCGTACGGAAAGGGGATGTTTTTGGATTTTACAGGAGTTTTAAGGAGCTCGAGGCTCAAGCTGGATCTCTGATATTTGATCCTAATGCAACGATCTACAAAG
GGTATCACTTATCTAAAGAATCCGAGCAGTACCTTGCATCACATGGACTTCGAAGTGCAACTTACTCTATAAGTGCTGCTAATGTGACAAACGATCTATTTGGAAAACTA
CTTGCTTGTCCTTATGAGCAACCATCTTCTACTAGAGGAAAAATGGCAGAAGAGTACCCCAAAGCTAAGAGACAACGAAACGTTGAGAATACCGAATCGGGGTTTGTAGA
TGCCGACATGGTCTCAACCGATTCTCCGAAACAAGAAATTACTCGGGATCATGGCTCTGAAGCCGTACCTGCTTCTTCAAGCCGTGTCTATTTTCTTGAGTTTGATGGTG
CCTCAAAGGGAAATCCTGGACTAGCAGGTGCTGGAGCTGTATTACGTGCGAACGATGGAACCACGATCTGTAGGTTGCAAGAAGGGGTTGGGATTGCTACAAATAACGTT
GCTGAATATCGTGCTGTAATATTAGGACTGAAACATGCTCTAAAGAGTGGCTTTAAACACATTTCTGTGCGAGGAGACTCCAAACTCGTTTGTATGCAGGTTCAGGGTCT
ATGGAAGCTCAAAAACCAAAATATGGCTACTTTGTGTAAAGTGGCAAAGGATCTCAAGGATAAGTTTGTGTCATTTGAGATAAACCACATCCCCAGGGAACAAAATTCCG
ACGCCGACGCTCTAGCAAACCGTGCTATATATCTCCGAGATGGCATTGTAGTAGAAGACTGCAAGCATAAATGA
Protein sequenceShow/hide protein sequence
MLEELIITPSPTLCFSAQFLRHCHSFHFFRMEGDKDAYYVVRKGDVFGFYRSFKELEAQAGSLIFDPNATIYKGYHLSKESEQYLASHGLRSATYSISAANVTNDLFGKL
LACPYEQPSSTRGKMAEEYPKAKRQRNVENTESGFVDADMVSTDSPKQEITRDHGSEAVPASSSRVYFLEFDGASKGNPGLAGAGAVLRANDGTTICRLQEGVGIATNNV
AEYRAVILGLKHALKSGFKHISVRGDSKLVCMQVQGLWKLKNQNMATLCKVAKDLKDKFVSFEINHIPREQNSDADALANRAIYLRDGIVVEDCKHK