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CmaCh11G014830 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh11G014830
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description54S ribosomal protein L37, mitochondrial-like
Genome locationCma_Chr11:9759576..9760500
RNA-Seq ExpressionCmaCh11G014830
SyntenyCmaCh11G014830
Gene Ontology termsGO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR013870 - Ribosomal protein L37, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022683.1 hypothetical protein SDJN02_16417 [Cucurbita argyrosperma subsp. argyrosperma]6.0e-5796.15Show/hide
Query:  MAMSQIRLFRRSLLNTK-DLIKLTNVRTFAAGGKKKGSK-GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        MAMSQIRL RRSLLN+K DLIKLTNVRTFAAGGKKKGSK GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
Subjt:  MAMSQIRLFRRSLLNTK-DLIKLTNVRTFAAGGKKKGSK-GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNST
        RKDAKTLPYEDLKRFVKLDTRARIKENNS+
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNST

XP_022928329.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita moschata]2.4e-5896.9Show/hide
Query:  MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSK-GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRR
        MAMSQIRL RRSLLNTKDLIKLTNVRTFAAGGKKKGSK GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSEL+R
Subjt:  MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSK-GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRR

Query:  KDAKTLPYEDLKRFVKLDTRARIKENNST
        KDAKTLPYEDLKRFVKLDTRARIKENNS+
Subjt:  KDAKTLPYEDLKRFVKLDTRARIKENNST

XP_022989738.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima]5.3e-6199.22Show/hide
Query:  MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRK
        MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRK
Subjt:  MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRK

Query:  DAKTLPYEDLKRFVKLDTRARIKENNST
        DAKTLPYEDLKRFVKLDTRARIKENNS+
Subjt:  DAKTLPYEDLKRFVKLDTRARIKENNST

XP_023530063.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita pepo subsp. pepo]2.1e-5796.92Show/hide
Query:  MAMSQIRLFRRSLLNTK-DLIKLTNVRTFAAGGKKKGSK-GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        MAMSQIRL RRSLLNTK DLIKLTNVRTFAAGGKKKGSK GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
Subjt:  MAMSQIRLFRRSLLNTK-DLIKLTNVRTFAAGGKKKGSK-GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNST
        RKDAKTLPYEDLKRFVKLDTRARIKENNS+
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNST

XP_038883607.1 54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida]1.4e-5084.5Show/hide
Query:  MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGK-KKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRR
        M MSQIRLFRRS++N+KDLI+LT+VRTFAAGGK KKGSKGGAA DAPKAS LSKEVKSTTVVGANILKEGADPK+MADSEYP WLW L+DK P LSELRR
Subjt:  MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGK-KKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRR

Query:  KDAKTLPYEDLKRFVKLDTRARIKENNST
        K+ +TLPY DLKRFVKLDTRA+IKENNST
Subjt:  KDAKTLPYEDLKRFVKLDTRARIKENNST

TrEMBL top hitse value%identityAlignment
A0A1S3B544 54S ribosomal protein L37, mitochondrial isoform X21.2e-4780.62Show/hide
Query:  MAMSQIRLFRRSLL-NTKDLIKLTNVRTFAAGGK-KKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        M +SQIR FRR+++ ++KDLI+LT+VR+FAAGGK KKGSKGGAA DAPKASILSKEVKSTTVVGANILKEGADPK+MADSEYP WLW L+DK P LSELR
Subjt:  MAMSQIRLFRRSLL-NTKDLIKLTNVRTFAAGGK-KKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNS
        RK+A++LPY DL+RFVKLDTRARIKENNS
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNS

A0A5D3CXE8 39S ribosomal protein L541.2e-4780.62Show/hide
Query:  MAMSQIRLFRRSLL-NTKDLIKLTNVRTFAAGGK-KKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR
        M +SQIR FRR+++ ++KDLI+LT+VR+FAAGGK KKGSKGGAA DAPKASILSKEVKSTTVVGANILKEGADPK+MADSEYP WLW L+DK P LSELR
Subjt:  MAMSQIRLFRRSLL-NTKDLIKLTNVRTFAAGGK-KKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELR

Query:  RKDAKTLPYEDLKRFVKLDTRARIKENNS
        RK+A++LPY DL+RFVKLDTRARIKENNS
Subjt:  RKDAKTLPYEDLKRFVKLDTRARIKENNS

A0A6J1DJG1 54S ribosomal protein L37, mitochondrial-like1.6e-5085.83Show/hide
Query:  MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRK
        MAMSQ RLF RS++N KD IK+T+VRTFAAGGKKKGSKGGAA D PKASILSKEVKS+TVVGANILKEGADPKVMADSEYPDWLWRLIDK PALSELRRK
Subjt:  MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRK

Query:  DAKTLPYEDLKRFVKLDTRARIKENNS
        + + LPYEDLKRFVKLD RA IKENNS
Subjt:  DAKTLPYEDLKRFVKLDTRARIKENNS

A0A6J1EKI4 54S ribosomal protein L37, mitochondrial-like1.2e-5896.9Show/hide
Query:  MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSK-GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRR
        MAMSQIRL RRSLLNTKDLIKLTNVRTFAAGGKKKGSK GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSEL+R
Subjt:  MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSK-GGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRR

Query:  KDAKTLPYEDLKRFVKLDTRARIKENNST
        KDAKTLPYEDLKRFVKLDTRARIKENNS+
Subjt:  KDAKTLPYEDLKRFVKLDTRARIKENNST

A0A6J1JQ61 54S ribosomal protein L37, mitochondrial-like2.6e-6199.22Show/hide
Query:  MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRK
        MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRK
Subjt:  MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRK

Query:  DAKTLPYEDLKRFVKLDTRARIKENNST
        DAKTLPYEDLKRFVKLDTRARIKENNS+
Subjt:  DAKTLPYEDLKRFVKLDTRARIKENNST

SwissProt top hitse value%identityAlignment
Q9CPW3 39S ribosomal protein L54, mitochondrial4.7e-0440.91Show/hide
Query:  NVRTFAAGGKKKGSKGGAATDAPK-ASILSKEVKSTT-VVGANILKEGADPKVMADSEYPDWLWRL
        ++R +A     KG KGG A +A K   + +   + TT  +G NI KEG D  + ADSEYP WL+++
Subjt:  NVRTFAAGGKKKGSKGGAATDAPK-ASILSKEVKSTT-VVGANILKEGADPKVMADSEYPDWLWRL

Arabidopsis top hitse value%identityAlignment
AT3G01740.1 Mitochondrial ribosomal protein L375.5e-4066.14Show/hide
Query:  MSQIRLFRRSLLNTKDLIKLTNVRTFAAGGK--KKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRK
        M++I L R S  ++KD+++    RTFAA     KKG KGG A+DAPK S L+KE+KSTTVVGAN LK+G+DPK++ DS+YPDWLW L+DKRPALSELRRK
Subjt:  MSQIRLFRRSLLNTKDLIKLTNVRTFAAGGK--KKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRK

Query:  DAKTLPYEDLKRFVKLDTRARIKENNS
        + +TLPY+DLKRFVKLDTR +IKENNS
Subjt:  DAKTLPYEDLKRFVKLDTRARIKENNS

AT5G14290.1 Mitochondrial ribosomal protein L374.1e-3559.84Show/hide
Query:  MSQIRLFRRSLLNTKDLIKLTNVRTF--AAGGKKKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRK
        M+ IR+F  S+  +KD+++    RTF  AAG  KK  +G    DAPKAS LSKE+KS+ VV AN LK+G DPK++ +S++PD+LW L+DKRPALSELRRK
Subjt:  MSQIRLFRRSLLNTKDLIKLTNVRTF--AAGGKKKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRK

Query:  DAKTLPYEDLKRFVKLDTRARIKENNS
        + +TL ++DLKRFVKLDTRARIKEN+S
Subjt:  DAKTLPYEDLKRFVKLDTRARIKENNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGAGCCAAATTAGATTGTTTAGAAGAAGCCTTCTGAATACCAAAGATCTGATAAAACTGACAAATGTGCGAACATTTGCTGCTGGGGGCAAAAAGAAG
GGTTCTAAAGGGGGTGCGGCTACTGATGCTCCTAAAGCATCAATTCTAAGTAAAGAGGTCAAATCTACCACTGTAGTTGGTGCCAATATTCTTAAGGAAGGTGCA
GATCCAAAAGTCATGGCAGACTCAGAGTACCCTGATTGGCTGTGGCGTTTGATCGATAAGCGTCCAGCTCTTAGTGAATTACGAAGGAAGGATGCCAAAACGCTT
CCCTACGAGGATCTCAAGCGCTTTGTTAAGTTGGATACTCGAGCAAGGATTAAGGAAAACAACTCTACATATTCGAACCCAACCAGCTCGGCGCAAGTCGATAGA
ATTGATAAGTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGAGCCAAATTAGATTGTTTAGAAGAAGCCTTCTGAATACCAAAGATCTGATAAAACTGACAAATGTGCGAACATTTGCTGCTGGGGGCAAAAAGAAG
GGTTCTAAAGGGGGTGCGGCTACTGATGCTCCTAAAGCATCAATTCTAAGTAAAGAGGTCAAATCTACCACTGTAGTTGGTGCCAATATTCTTAAGGAAGGTGCA
GATCCAAAAGTCATGGCAGACTCAGAGTACCCTGATTGGCTGTGGCGTTTGATCGATAAGCGTCCAGCTCTTAGTGAATTACGAAGGAAGGATGCCAAAACGCTT
CCCTACGAGGATCTCAAGCGCTTTGTTAAGTTGGATACTCGAGCAAGGATTAAGGAAAACAACTCTACATATTCGAACCCAACCAGCTCGGCGCAAGTCGATAGA
ATTGATAAGTACTAA
Protein sequenceShow/hide protein sequence
MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSKGGAATDAPKASILSKEVKSTTVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRKDAKTL
PYEDLKRFVKLDTRARIKENNSTYSNPTSSAQVDRIDKY