; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh11G018280 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh11G018280
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description50S ribosomal protein L6
Genome locationCma_Chr11:12213310..12215992
RNA-Seq ExpressionCmaCh11G018280
SyntenyCmaCh11G018280
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000702 - Ribosomal protein L6
IPR002358 - Ribosomal protein L6, conserved site
IPR019906 - Ribosomal protein L6, bacterial-type
IPR020040 - Ribosomal protein L6, alpha-beta domain
IPR036789 - Ribosomal protein L6, alpha-beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136314.1 50S ribosomal protein L6, chloroplastic [Momordica charantia]6.4e-11493.36Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK
        MASTL+IPFQTSNFRSTFLGEKNGFS STMPV HI  LRKTIECKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELS+LYPREVKIER+DSGILRVKK
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK

Query:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP
        A+ETRRA QMHGLFRTLTDNMV+GVS+GFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIPDGLQV VEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

XP_022930652.1 50S ribosomal protein L6, chloroplastic isoform X2 [Cucurbita moschata]2.7e-12098.67Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK
        MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK

Query:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP
        ALETRRANQMHGLFRTLTDNMV+GVSKGFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIPDGLQV VEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

XP_022988915.1 50S ribosomal protein L6, chloroplastic isoform X1 [Cucurbita maxima]5.8e-115100Show/hide
Query:  NFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHG
        NFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHG
Subjt:  NFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHG

Query:  LFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYAD
        LFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYAD
Subjt:  LFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYAD

Query:  EVVRRKEGKAGKKK
        EVVRRKEGKAGKKK
Subjt:  EVVRRKEGKAGKKK

XP_022988916.1 50S ribosomal protein L6, chloroplastic isoform X2 [Cucurbita maxima]1.9e-121100Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK
        MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK

Query:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP
        ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

XP_023530191.1 50S ribosomal protein L6, chloroplastic [Cucurbita pepo subsp. pepo]3.9e-11997.35Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK
        MASTLSIPFQTSNFRSTFLGEKNGFSAST+PVSHIVRLR+TIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDD+GILRVKK
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK

Query:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP
        ALETRRANQMHGLFRTLTDNMV+GVSKGFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIPDGLQV VEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

TrEMBL top hitse value%identityAlignment
A0A6J1C3Z5 50S ribosomal protein L6, chloroplastic3.1e-11493.36Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK
        MASTL+IPFQTSNFRSTFLGEKNGFS STMPV HI  LRKTIECKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELS+LYPREVKIER+DSGILRVKK
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK

Query:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP
        A+ETRRA QMHGLFRTLTDNMV+GVS+GFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIPDGLQV VEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

A0A6J1ER61 50S ribosomal protein L6, chloroplastic isoform X21.3e-12098.67Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK
        MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK

Query:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP
        ALETRRANQMHGLFRTLTDNMV+GVSKGFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIPDGLQV VEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

A0A6J1ERI9 50S ribosomal protein L6, chloroplastic isoform X14.1e-11498.6Show/hide
Query:  NFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHG
        NFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHG
Subjt:  NFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHG

Query:  LFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYAD
        LFRTLTDNMV+GVSKGFEKKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIPDGLQV VEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYAD
Subjt:  LFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYAD

Query:  EVVRRKEGKAGKKK
        EVVRRKEGKAGKKK
Subjt:  EVVRRKEGKAGKKK

A0A6J1JIK5 50S ribosomal protein L6, chloroplastic isoform X29.1e-122100Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK
        MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK

Query:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP
        ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKYADEVVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

A0A6J1JKX3 50S ribosomal protein L6, chloroplastic isoform X12.8e-115100Show/hide
Query:  NFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHG
        NFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHG
Subjt:  NFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHG

Query:  LFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYAD
        LFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYAD
Subjt:  LFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYAD

Query:  EVVRRKEGKAGKKK
        EVVRRKEGKAGKKK
Subjt:  EVVRRKEGKAGKKK

SwissProt top hitse value%identityAlignment
B0C1E7 50S ribosomal protein L68.1e-5158.66Show/hide
Query:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEG
        SRIGK PI +P  V +T++GQ + VKGP GELS     EV IE+ D+ ++ V +  E+R A Q HGL RTL  NMV GVSKGFEKKLQ+ GVGYRA ++G
Subjt:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEG

Query:  KDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK
        ++L+LN+G+S+PV +  P+G+QV VE NT + VSG +K  +G  AA IR  RPPEPYKGKG++YADE VRRK GKAGKK
Subjt:  KDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK

B7KI01 50S ribosomal protein L61.1e-5056.42Show/hide
Query:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEG
        SRIGK+PI +P+ VT+ + G  + VKGP GEL    P  V +E+D+ G+LRV +  ++R A Q HGL RTL  NMV GVSKGFEK+L++ GVGYRA  +G
Subjt:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEG

Query:  KDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK
          L LN+G+S PV M +P G+ V VE+NT IT++G DK  +G  AA IR  RPPEPYKGKG++Y  EVVRRK GK GKK
Subjt:  KDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK

O23049 50S ribosomal protein L6, chloroplastic6.5e-9375.22Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK
        MAS+L   FQ    RS FLG++N F  S+ P + +    KTIECKESRIGKQPI VPSNVTI L+GQDLKVKGPLGEL+L YPREV++ +++SG LRVKK
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK

Query:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP
         +ETRRANQMHGLFRTLTDNMV+GVSKGFEKKL LVGVGYRA ++GK+LVLNLGFSHPV+M IPD L+V VEENTRITVSGYDK  IGQFAA++R+WRPP
Subjt:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKY+DE+VRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

P82193 50S ribosomal protein L6, chloroplastic1.2e-8974.32Show/hide
Query:  LSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALET
        +S+P   S+ +S FLG K   S S +PV+ I   RK+++CKESRIGKQPI VP+NV I ++GQDLKVKGPLGELS+ YPREV +E+ +SG LRV+KA+ET
Subjt:  LSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALET

Query:  RRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYK
        RRANQMHGLFRTLTDNMV+GVSKGFEKKLQLVGVGYRA +EGKDL+L+LGFSHPVRMAIPD LQV VEENT++TVSG DK  +GQFAA+IR WRPPEPYK
Subjt:  RRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYK

Query:  GKGVKYADEVVRRKEGKAGKKK
        GKGV+Y DEVVRRKEGKAGKKK
Subjt:  GKGVKYADEVVRRKEGKAGKKK

Q8YPJ3 50S ribosomal protein L66.8e-5055.06Show/hide
Query:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEG
        SRIGK+PI VP+ V +T+ G  + VKGP GELS   P  V + ++    L+V +  ETR + Q+HGL RTL  NMV GVS+GF+++L++ GVGYRA ++G
Subjt:  SRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEG

Query:  KDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGK
        ++LVLN+G+SH V++  PDG+Q +VE NT + VSGYDK  +G  AA +R  RPPEPYKGKG++YA EVVRRK GK GK
Subjt:  KDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGK

Arabidopsis top hitse value%identityAlignment
AT1G05190.1 Ribosomal protein L6 family4.6e-9475.22Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK
        MAS+L   FQ    RS FLG++N F  S+ P + +    KTIECKESRIGKQPI VPSNVTI L+GQDLKVKGPLGEL+L YPREV++ +++SG LRVKK
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKK

Query:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP
         +ETRRANQMHGLFRTLTDNMV+GVSKGFEKKL LVGVGYRA ++GK+LVLNLGFSHPV+M IPD L+V VEENTRITVSGYDK  IGQFAA++R+WRPP
Subjt:  ALETRRANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEVVRRKEGKAGKKK
        EPYKGKGVKY+DE+VRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEVVRRKEGKAGKKK

AT2G18400.1 ribosomal protein L6 family protein1.5e-2047.96Show/hide
Query:  FEKKLQLVGVGYRAILE--GKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGK
        F + L++VGVGY+A  E  G+ L L LG+SH V +A+P  ++V   +N  +  +G DK  + QFAA++R  +PPEPYKGKG+ Y DEVV++K+GK  K
Subjt:  FEKKLQLVGVGYRAILE--GKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACGCTATCCATCCCTTTTCAAACCAGCAATTTTCGGTCTACTTTTTTGGGAGAGAAAAATGGATTCTCTGCTTCTACAATGCCTGTATCCCATATT
GTTCGCTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAACCAATTCAAGTGCCATCCAATGTAACCATCACATTACAGGGTCAGGATTTGAAA
GTTAAAGGTCCTTTGGGAGAGCTTTCACTACTTTATCCACGAGAAGTGAAGATTGAGAGGGATGATTCAGGGATCTTAAGGGTTAAGAAGGCACTGGAGACTAGG
AGAGCCAACCAAATGCATGGGCTTTTCAGGACCCTTACAGACAATATGGTGATAGGAGTATCCAAGGGGTTTGAGAAGAAACTTCAATTGGTAGGTGTTGGTTAT
CGAGCGATTTTAGAAGGAAAAGACTTGGTATTAAATCTTGGGTTCTCTCATCCAGTTAGAATGGCCATTCCTGACGGGCTTCAAGTAATGGTGGAAGAAAACACC
AGAATTACCGTCAGTGGTTATGATAAATGTGCCATTGGTCAGTTTGCTGCCTCTATTAGACAATGGAGACCTCCAGAACCGTATAAGGGTAAAGGAGTGAAATAT
GCTGATGAAGTTGTCAGAAGAAAGGAGGGGAAAGCAGGGAAGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
CATTTTAGGTTTGGATAGCCTCCTCTCACAGCAGACCATATAACTGGTTCTGTCAAACTGGGTGTTCACTGTAATAGGCTATGGCTTCCACGCTATCCATCCCTT
TTCAAACCAGCAATTTTCGGTCTACTTTTTTGGGAGAGAAAAATGGATTCTCTGCTTCTACAATGCCTGTATCCCATATTGTTCGCTTGAGGAAGACTATAGAAT
GCAAGGAATCACGAATAGGGAAGCAACCAATTCAAGTGCCATCCAATGTAACCATCACATTACAGGGTCAGGATTTGAAAGTTAAAGGTCCTTTGGGAGAGCTTT
CACTACTTTATCCACGAGAAGTGAAGATTGAGAGGGATGATTCAGGGATCTTAAGGGTTAAGAAGGCACTGGAGACTAGGAGAGCCAACCAAATGCATGGGCTTT
TCAGGACCCTTACAGACAATATGGTGATAGGAGTATCCAAGGGGTTTGAGAAGAAACTTCAATTGGTAGGTGTTGGTTATCGAGCGATTTTAGAAGGAAAAGACT
TGGTATTAAATCTTGGGTTCTCTCATCCAGTTAGAATGGCCATTCCTGACGGGCTTCAAGTAATGGTGGAAGAAAACACCAGAATTACCGTCAGTGGTTATGATA
AATGTGCCATTGGTCAGTTTGCTGCCTCTATTAGACAATGGAGACCTCCAGAACCGTATAAGGGTAAAGGAGTGAAATATGCTGATGAAGTTGTCAGAAGAAAGG
AGGGGAAAGCAGGGAAGAAGAAGTGATGGTTCGTTATTCATTGTTGGTTTTTCTCTCTTTCTGAAATAAGTGATTGTCTTTCTAGAATCAGAAAGGATTATTGGC
ATCATAATTTATTAGAGTTCCATTTTTTTTTCTTCTCCTATTTGTTATTAAATTTTCAGTTTAATATCATCATCACTATTCAGTTCCTACCACATTTTCATCAGT
TGGAAAAACGGCATCTAGTGTATACTTGCGCATGTAGCATGGACTCGGTTTTCTTCCAGTGCTAAGTGTGTCCGTGTGATGAGAACTGAACAATAATATAATTTC
TTTTCTGC
Protein sequenceShow/hide protein sequence
MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVSHIVRLRKTIECKESRIGKQPIQVPSNVTITLQGQDLKVKGPLGELSLLYPREVKIERDDSGILRVKKALETR
RANQMHGLFRTLTDNMVIGVSKGFEKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPDGLQVMVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKY
ADEVVRRKEGKAGKKK