CuGenDBv2

Gene ID	CmaCh12G005160
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Thioredoxin domain-containing protein
Genome location	Cma_Chr12:2658060..2661139
RNA-Seq Expression	CmaCh12G005160
Synteny	CmaCh12G005160
Gene Ontology terms	GO:0006396 - RNA processing (biological process) GO:0045454 - cell redox homeostasis (biological process) GO:0009507 - chloroplast (cellular component)
InterPro domains	IPR013766 - Thioredoxin domain IPR036249 - Thioredoxin-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6585642.1 hypothetical protein SDJN03_18375, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-119

86.64

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Query:  RPSLSGQASATHKFRAPSFWKKYNKGIGDNFWRKFEDIMRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAF
        RPS     S+ H+    +  +   +G+   F     +IMRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAF
Subjt:  RPSLSGQASATHKFRAPSFWKKYNKGIGDNFWRKFEDIMRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAF

Query:  KPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVI
        KPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALA GKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPE+LHYDISYVPCFVI
Subjt:  KPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVI

Query:  LDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPGSDNKQQPPC
        LDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPGSDN+QQPPC
Subjt:  LDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPGSDNKQQPPC

XP_022144394.1 uncharacterized protein LOC111014082 [Momordica charantia]

1.7e-92

80.29

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Query:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL
        M STPKQP FCFKWPWD +PKNP DCSFEGPWLFKSLQNVG FA NF+N+VSKSSPPW+NAFKPL F+    GNK S  RKKL+PEEQGEAE+RAFA+AL
Subjt:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL

Query:  ACGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT
        A GKEATVIEFYSPKC LC+SLL  V +MEARNS WL+IVMADAEN+KWLPE+LHYDI YVPCFV+LDK GKALAKTGIPSSRLHVIAGLSHLL LKRP 
Subjt:  ACGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT

Query:  TLPGSDNK
        +L GS NK
Subjt:  TLPGSDNK

XP_022951826.1 uncharacterized protein LOC111454558 [Cucurbita moschata]

1.4e-115

97.13

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Query:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGK
        MRSTPKQPLFCFKWPWD+NPKNPSDC FEGPWLFKSLQNVGVFA+NFLNEVSKSSPP VNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALA GK
Subjt:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGK

Query:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
        EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPE+LHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
Subjt:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG

Query:  SDNKQQPPC
        SDNKQQPPC
Subjt:  SDNKQQPPC

XP_023002017.1 uncharacterized protein LOC111496027 [Cucurbita maxima]

5.6e-120

100

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Query:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGK
        MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGK
Subjt:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGK

Query:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
        EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
Subjt:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG

Query:  SDNKQQPPC
        SDNKQQPPC
Subjt:  SDNKQQPPC

XP_023537358.1 uncharacterized protein LOC111798444 [Cucurbita pepo subsp. pepo]

1.5e-117

97.61

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Query:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGK
        MRSTPKQPLFCFKWPWD+NPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNK+SKSRKKLSPEEQGEAENRAFAAALA GK
Subjt:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGK

Query:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
        EATVIEFYSPKCPLCSSLLGFVTQMEARN+QWLNIVMADAENDKWLPE+LHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
Subjt:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG

Query:  SDNKQQPPC
        SDNKQQPPC
Subjt:  SDNKQQPPC

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BAS7 uncharacterized protein LOC103487919

2.5e-89

80.3

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Query:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL
        M STPKQPLFCFKWPWD++ KN SDCSFEGPWLFKSLQNVG FA NF+N+VSKSSPPW+  FKPL F+    GNKIS+SRK L+PEEQGEAENRA AAAL
Subjt:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL

Query:  ACGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT
        A GKEATVIEFYSPKC LC+SLL  V ++EARNS WLNIVMADAENDKWLPE+LHYDI YVPCFV+LDK GKALAKTGIPSSRLHVIAGLSHL+KLK P 
Subjt:  ACGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT

Query:  TLP
        + P
Subjt:  TLP

A0A5A7TE38 Thioredoxin-like protein

6.1e-88

79.31

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Query:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL
        M STPKQPLFCFKWPWD++ +N SDCSFEGPWLFKSLQNVG FA NF+N+VSKSSP W+  FKPL F+    GNKIS+SRK L+PEEQGEAENRA AAAL
Subjt:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL

Query:  ACGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT
        A GKEATVIEFYSPKC LC+SLL  V ++EARNS WLNIVMADAENDKWLPE+LHYDI YVPCFV+LDK GKALAKTGIPSSRLHVIAGLSHL+KLK P 
Subjt:  ACGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT

Query:  TLP
        + P
Subjt:  TLP

A0A6J1CS67 uncharacterized protein LOC111014082

8.2e-93

80.29

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Query:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL
        M STPKQP FCFKWPWD +PKNP DCSFEGPWLFKSLQNVG FA NF+N+VSKSSPPW+NAFKPL F+    GNK S  RKKL+PEEQGEAE+RAFA+AL
Subjt:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL

Query:  ACGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT
        A GKEATVIEFYSPKC LC+SLL  V +MEARNS WL+IVMADAEN+KWLPE+LHYDI YVPCFV+LDK GKALAKTGIPSSRLHVIAGLSHLL LKRP 
Subjt:  ACGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT

Query:  TLPGSDNK
        +L GS NK
Subjt:  TLPGSDNK

A0A6J1GJW7 uncharacterized protein LOC111454558

6.9e-116

97.13

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Query:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGK
        MRSTPKQPLFCFKWPWD+NPKNPSDC FEGPWLFKSLQNVGVFA+NFLNEVSKSSPP VNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALA GK
Subjt:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGK

Query:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
        EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPE+LHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
Subjt:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG

Query:  SDNKQQPPC
        SDNKQQPPC
Subjt:  SDNKQQPPC

A0A6J1KP92 uncharacterized protein LOC111496027

2.7e-120

100

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Query:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGK
        MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGK
Subjt:  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGK

Query:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
        EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
Subjt:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG

Query:  SDNKQQPPC
        SDNKQQPPC
Subjt:  SDNKQQPPC

SwissProt top hits

e value

%identity

Alignment

P35088 Thiol:disulfide interchange protein TxlA

9.3e-09

38.46

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Query:  VIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGK
        ++EFY+  C  C ++ G +  ++   S  L+ VM + +NDKWLPE+L Y++  +P FV L+ QG+
Subjt:  VIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGK

P73920 Thiol:disulfide interchange protein TxlA homolog

1.6e-08

34.57

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Query:  AAALACGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKT
        A AL  G+  T++EFY+  C  C ++   + +++      +N  M + +N+KWLPE+L Y +  +P FV LD  G A+A++
Subjt:  AAALACGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKT

Arabidopsis top hits

e value

%identity

Alignment

AT5G06430.1 Thioredoxin superfamily protein

5.1e-63

60.2

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Query:  STPKQPLFCFKWPWDIN--PKNPSD-CSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACG
        ST K P FC KWPWD N  PK+ S  C F+GPWLF+S+Q +G  A + L    ++       F+P           +K LS  EQGEAE RAFAAALA  
Subjt:  STPKQPLFCFKWPWDIN--PKNPSD-CSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACG

Query:  KEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRP
        KEATV+EFYS KC LC+SLL FV ++E RNS WL+I MADAEN+KW PE+LHYD+ YVPCFV+LDK G+ALAKTG+PSSR HVIAG+SHLLK+KRP
Subjt:  KEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRP

Sequences

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CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGAAGGCAAAGGAGAAGCCATCGAGCTCGAAATCCCCCCCTCCGCTCGCCCTGCTTTTCTTTCCTAGCCTTCTCAATGTCGTCCGCCCTTCTCTTTCAGGCCAA
GCATCTGCAACTCACAAGTTTCGAGCACCGAGCTTCTGGAAGAAGTACAACAAGGGGATTGGTGATAATTTTTGGAGGAAATTTGAAGATATAATGCGTTCGACA
CCCAAACAGCCTCTCTTTTGCTTCAAATGGCCATGGGACATAAACCCTAAAAATCCTTCTGACTGTTCATTTGAGGGTCCTTGGCTGTTCAAATCACTGCAAAAT
GTGGGTGTCTTTGCTTCCAATTTCTTAAACGAAGTTTCAAAGTCATCACCTCCATGGGTCAATGCTTTCAAGCCATTGTCGTTTGATGGAAATAAGATATCTAAG
TCTAGAAAAAAGCTAAGTCCTGAAGAGCAAGGAGAGGCAGAAAATAGGGCATTTGCAGCAGCATTAGCCTGTGGGAAAGAAGCCACCGTCATTGAGTTCTACTCG
CCTAAATGTCCCCTTTGCAGTTCATTGCTTGGTTTTGTTACGCAGATGGAGGCAAGGAATTCACAATGGCTTAACATTGTGATGGCTGATGCAGAGAATGATAAA
TGGCTGCCTGAGATTCTTCATTATGATATTAGTTATGTTCCTTGCTTCGTGATTTTGGACAAACAAGGCAAGGCGCTAGCAAAGACGGGTATTCCGAGCAGTCGG
CTTCATGTAATTGCAGGACTTTCTCATCTTCTCAAACTGAAGCGCCCGACAACACTCCCTGGATCAGATAACAAGCAGCAGCCACCATGTTGAAACACAGACATT
TGGAACAAAAGAGGAGGAGTCGTTACAAATGGTATCAGAATGGTAGCTCTTCCTAATAAGATGTGGTTCGGGATGAACTAAGGTAGAAACTGGTAGAGGCATATG
ACACTCAAGTAAATGAGGGTATATGAATGAACTGAAACTACATCCGAATGAGAGTGATCATGAGAATAGAGTAACCAAGAAATGCTTAAAAGAATTGAAAGTCAG
GTTGTGAACAAAGTGCACCTTCCTTTACATTGGCTCAATCACAAGAGCAATTATATGTTGGGTATATGAACAAAGTGTACTTTCCTTTACATTGGCTCAATCACA
AGAGCAATTATATGTCGGGTGACCTCTTTTAAGAATTTTTTTAGGATGTATGCGAGTGAAGATAAAATATGCTAGAATGGCTCTGGTTTGTTTGTGAGAATAGTC
TTCACCACTCTTAAGAAGCGAATAGTAGGTAACATGATCATGTTACATAAGAATGTCGAAACTATCAGGTGTCAAATCTGAACTCCAAATCTTAGACATGGATAT
TTACAAGTTGATTCGGTCTCTAGCCATAAAAATATGACTCGTTCTACCACG

Protein sequence

Show/hide protein sequence

MKAKEKPSSSKSPPPLALLFFPSLLNVVRPSLSGQASATHKFRAPSFWKKYNKGIGDNFWRKFEDIMRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQN
VGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDK
WLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPGSDNKQQPPC

CmaCh12G005160 (gene) of Cucurbita maxima (Rimu) v1.1 genome