; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh12G006100 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh12G006100
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionBnaC06g07050D protein
Genome locationCma_Chr12:3204275..3205894
RNA-Seq ExpressionCmaCh12G006100
SyntenyCmaCh12G006100
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7013179.1 unnamed protein product [Microthlaspi erraticum]3.1e-1176.36Show/hide
Query:  SVRLGFRNRIFEELGLPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPARAA
        +V  G  NR      LPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPAR +
Subjt:  SVRLGFRNRIFEELGLPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPARAA
KAF1866114.1 hypothetical protein Lal_00043067 [Lupinus albus]7.4e-1384.62Show/hide
Query:  RKVRMTSSHHAPYALGDTRATMAGTKGRDPARAATRLHEAGIASNRRSAIRR
        RKVRMTSSHHAPYALGDTRATM+GTK R P+RAATRLHEA IASNR S+I R
Subjt:  RKVRMTSSHHAPYALGDTRATMAGTKGRDPARAATRLHEAGIASNRRSAIRR
KGN54736.1 hypothetical protein Csa_012261 [Cucumis sativus]1.1e-1182Show/hide
Query:  LPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPARAATRLHEAGIAS
        L VIS+RKVRM SSHHAPYALGDTR  MAGTK  DPA+AATRLHE GIAS
Subjt:  LPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPARAATRLHEAGIAS
PHT34165.1 hypothetical protein CQW23_25965 [Capsicum baccatum]4.0e-11100Show/hide
Query:  LPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPAR
        LPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPAR
Subjt:  LPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPAR
VFQ70667.1 unnamed protein product [Cuscuta campestris]4.0e-11100Show/hide
Query:  LPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPAR
        LPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPAR
Subjt:  LPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPAR
TrEMBL top hitse value%identityAlignment
A0A0A0L3L9 Uncharacterized protein5.1e-1282Show/hide
Query:  LPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPARAATRLHEAGIAS
        L VIS+RKVRM SSHHAPYALGDTR  MAGTK  DPA+AATRLHE GIAS
Subjt:  LPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPARAATRLHEAGIAS
A0A6A5LUN7 Uncharacterized protein3.6e-1384.62Show/hide
Query:  RKVRMTSSHHAPYALGDTRATMAGTKGRDPARAATRLHEAGIASNRRSAIRR
        RKVRMTSSHHAPYALGDTRATM+GTK R P+RAATRLHEA IASNR S+I R
Subjt:  RKVRMTSSHHAPYALGDTRATMAGTKGRDPARAATRLHEAGIASNRRSAIRR
A0A6D2HBK0 Uncharacterized protein1.5e-1176.36Show/hide
Query:  SVRLGFRNRIFEELGLPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPARAA
        +V  G  NR      LPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPAR +
Subjt:  SVRLGFRNRIFEELGLPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPARAA
A0A6N2L1K4 Uncharacterized protein ycf685.5e-1491.67Show/hide
Query:  MTSSHHAPYALGDTRATMAGTKGRDPARAATRLHEAGIASNRRSAIRR
        MTSSHHAPYALGDTRATMAGTKGRDPARAATRLHEAGIASNRR  + R
Subjt:  MTSSHHAPYALGDTRATMAGTKGRDPARAATRLHEAGIASNRRSAIRR
A0A6N2MWA8 Uncharacterized protein ycf688.8e-12100Show/hide
Query:  PYALGDTRATMAGTKGRDPARAATRLHEAGIASNRRSAIRR
        PYALGDTRATMAGTKGRDPARAATRLHEAGIASNRRSAIRR
Subjt:  PYALGDTRATMAGTKGRDPARAATRLHEAGIASNRRSAIRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCCTGGCTTGTTGGACGTGGAGATTTCGTAAAAAAGCTATATTCGGTGCGGCTAGGGTTTCGAAACAGAATCTTTGAAGAACTAGGACTGCCGGTGATAAGCCG
GAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGGCTGCAACTCGCC
TGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGCCTGGCTTGTTGGACGTGGAGATTTCGTAAAAAAGCTATATTCGGTGCGGCTAGGGTTTCGAAACAGAATCTTTGAAGAACTAGGACTGCCGGTGATAAGCCG
GAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGGCTGCAACTCGCC
TGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGA
Protein sequenceShow/hide protein sequence
MSAWLVGRGDFVKKLYSVRLGFRNRIFEELGLPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPARAATRLHEAGIASNRRSAIRR