CuGenDBv2

Gene ID	CmaCh12G007750
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Cytochrome f
Genome location	Cma_Chr12:5165729..5166092
RNA-Seq Expression	CmaCh12G007750
Synteny	CmaCh12G007750
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0009507 - chloroplast (cellular component) GO:0031361 - integral component of thylakoid membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0020037 - heme binding (molecular function)
InterPro domains	IPR002325 - Cytochrome f IPR036826 - Cytochrome f large domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAF7034663.1 hypothetical protein CFC21_045648 [Triticum aestivum]

3.9e-11

56.25

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Query:  SENIPYTEAVTVEGWMHRMSGKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        S N  Y    TV+       G+ +I  +     L    GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  SENIPYTEAVTVEGWMHRMSGKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

KQK12757.1 hypothetical protein BRADI_1g05781v3 [Brachypodium distachyon]

1.7e-11

57.5

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Query:  SENIPYTEAVTVEGWMHRMSGKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        S N  Y    TV+       G+ LI  +     L    GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  SENIPYTEAVTVEGWMHRMSGKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

YP_009765686.1 cytochrome f [Hymenaea verrucosa]

5.0e-11

82.98

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Query:  LFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        LF   GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  LFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

YP_009767677.1 cytochrome f [Neoapaloxylon tuberosum]

5.0e-11

82.98

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Query:  LFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        LF   GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  LFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

YP_009768515.1 cytochrome f [Peltogyne chrysopis]

5.0e-11

82.98

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Query:  LFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        LF   GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  LFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

TrEMBL top hits

e value

%identity

Alignment

A0A0Q3GQR5 Cytochrome f

8.4e-12

57.5

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Query:  SENIPYTEAVTVEGWMHRMSGKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        S N  Y    TV+       G+ LI  +     L    GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  SENIPYTEAVTVEGWMHRMSGKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

A0A3B6GML8 Cytochrome f

1.9e-11

56.25

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Query:  SENIPYTEAVTVEGWMHRMSGKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        S N  Y    TV+       G+ +I  +     L    GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  SENIPYTEAVTVEGWMHRMSGKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

A0A6H0E2D2 Cytochrome f

2.4e-11

82.98

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Query:  LFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        LF   GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  LFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

A0A6H0EAB7 Cytochrome f

2.4e-11

82.98

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Query:  LFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        LF   GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  LFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

A0A6H0EBF9 Cytochrome f

2.4e-11

82.98

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Query:  LFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        LF   GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  LFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

SwissProt top hits

e value

%identity

Alignment

A1E9K3 Cytochrome f

1.9e-13

90.48

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Query:  GESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        GESIKI+QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  GESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

A1EA21 Cytochrome f

2.5e-13

66.67

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Query:  GKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        G+ +I ++     L    GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  GKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

A8SEB6 Cytochrome f

1.9e-13

90.48

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Query:  GESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        GESIKI+QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  GESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

A8Y999 Cytochrome f

2.5e-13

66.67

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Query:  GKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY
        G+ +I ++     L    GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF+
Subjt:  GKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFY

Q14FE4 Cytochrome f

2.5e-13

69.49

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Query:  GKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFF
        G+ +I S+     L    GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF
Subjt:  GKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFF

Arabidopsis top hits

e value

%identity

Alignment

ATCG00540.1 photosynthetic electron transfer A

5.2e-14

90.24

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Query:  GESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFF
        GESIK++QPLTSN  NVGGFGQGDAEIVLQDPLRVQGLLFF
Subjt:  GESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFF

Sequences

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CDS sequence

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ATGTTCACTTCTGAAAATATCCCATATACGGAGGCGGTAACCGTGGAAGGGTGGATGCATCGAATGAGCGGCAAGTGGTTGATATTATCCCTCAAGGACCAGAACTTCTT
GTTTCAGATGGCGGGCGAATCTATCAAAATCAATCAACCATTAACGAGTAATCAATCTAATGTGGGAGGATTTGGTCAGGGAGATGCGGAAATAGTCCTTCAAGATCCAT
TACGTGTCCAAGGCCTTTTGTTCTTTTATCTGTTATAA

mRNA sequence

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Protein sequence

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MFTSENIPYTEAVTVEGWMHRMSGKWLILSLKDQNFLFQMAGESIKINQPLTSNQSNVGGFGQGDAEIVLQDPLRVQGLLFFYLL

CmaCh12G007750 (gene) of Cucurbita maxima (Rimu) v1.1 genome