; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh12G009010 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh12G009010
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionB3 domain-containing protein At2g31420-like
Genome locationCma_Chr12:6867264..6867776
RNA-Seq ExpressionCmaCh12G009010
SyntenyCmaCh12G009010
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586098.1 hypothetical protein SDJN03_18831, partial [Cucurbita argyrosperma subsp. sororia]1.4e-8996.47Show/hide
Query:  MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSP
        MSVSPYPS SKWRNAFFLITTPDMPTRMRKQIEEM GYNLQLVIHKKLIETDMNEKDGRLFLIIKKILF FITPDEE+LLNDANG MEVKILDEGQRVSP
Subjt:  MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSP

Query:  MFLTKGKIQEHDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL
        MFLTKGKIQEHDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDI+NEIFTSDLYFALNTMDGRCFL
Subjt:  MFLTKGKIQEHDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL

KAG6586099.1 hypothetical protein SDJN03_18832, partial [Cucurbita argyrosperma subsp. sororia]3.0e-7177.65Show/hide
Query:  MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSP
        MSVSP  SMS  R  FF+ +TPD+PTRMRK+IE+MHGYNLQ+VI+KKLI+ DMN+KDGR+F  IK I FDF+TP E+E+LNDANGV+EVKI+DE QRVSP
Subjt:  MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSP

Query:  MFLTKGKIQEHDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL
        M LTKGKI+EHD Y  TTHWNSFV KNCLK G+LIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRC L
Subjt:  MFLTKGKIQEHDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL

KAG6586100.1 hypothetical protein SDJN03_18833, partial [Cucurbita argyrosperma subsp. sororia]5.4e-6584.35Show/hide
Query:  MPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSPMFLTKGKIQEHDAYCLTTHWNSF
        MPT MRKQIE+MHGYNLQLVIHK+LIE DMNEK GRLF  IKK+ FDF+TP+E+ELLNDANGVMEVKI+DE QRVSPMFLTKGKI+E D Y  TTHWNSF
Subjt:  MPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSPMFLTKGKIQEHDAYCLTTHWNSF

Query:  VAKNCLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL
        V KNCLK+GHLIQLWSFRRVRLVDIDNEIFTSDLYFALNT+DGRC L
Subjt:  VAKNCLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL

KAG7020922.1 hypothetical protein SDJN02_17610, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-7466.52Show/hide
Query:  MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEG-----
        MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEM GYNLQLVIHKKLIETDMNEKDGRLFLIIKKILF FITPDEE+LLNDANG MEVKILDEG     
Subjt:  MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEG-----

Query:  -------------------------------------------------------------QRVSPMFLTKGKIQEHDAYCLTTHWNSFVAKNCLKIGHL
                                                                     QRVSPM LTKGKI+EHD Y  TTHWNSFV KNCLK G+L
Subjt:  -------------------------------------------------------------QRVSPMFLTKGKIQEHDAYCLTTHWNSFVAKNCLKIGHL

Query:  IQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGR
        IQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGR
Subjt:  IQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGR

XP_022938320.1 B3 domain-containing protein At1g05930-like [Cucurbita moschata]1.2e-9198.24Show/hide
Query:  MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSP
        MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEM GYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEE+LLNDANGVMEVKILDEGQRVSP
Subjt:  MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSP

Query:  MFLTKGKIQEHDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL
        MFLTKGKIQEHDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDI+NEIFTSDLYFALNTMDGRCFL
Subjt:  MFLTKGKIQEHDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL

TrEMBL top hitse value%identityAlignment
A0A6J1CX35 putative B3 domain-containing protein At2g274109.5e-2343.4Show/hide
Query:  KWRNAFFLITTPDMPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKI-LFDFITPDEEELLNDANG-----VMEVKILDEGQRVSPMFLT
        K R A  L  TP+MP  MR +I E+ GY +QLVI K+L  TDMN+  GRL L  KK+ + DF+T +E +LLN  +       M+V I+D   +   + L 
Subjt:  KWRNAFFLITTPDMPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKI-LFDFITPDEEELLNDANG-----VMEVKILDEGQRVSPMFLT

Query:  KGKIQEHDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDID--NEIFTSDLYFAL
        K KI   D YCL T WNSFV +  L+ G  IQLWSFR+    + +   +I TS L+ A+
Subjt:  KGKIQEHDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDID--NEIFTSDLYFAL

A0A6J1FDQ3 B3 domain-containing protein At2g31420-like5.9e-6583.67Show/hide
Query:  MPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSPMFLTKGKIQEHDAYCLTTHWNSF
        MPT MRKQIE+MHGYNLQLVIHK+LIE DMNEK GRLF  IKK+ FDF+TP+E+ELLNDANGVMEVKI+DE QRVSPMFLTKGKI++ D Y  TTHWNSF
Subjt:  MPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSPMFLTKGKIQEHDAYCLTTHWNSF

Query:  VAKNCLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL
        V KNCLK+GHLIQLWSFRRVRLVDIDNEIFTSDLYFALNT+DGRC L
Subjt:  VAKNCLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL

A0A6J1FIJ8 B3 domain-containing protein At2g31420-like1.6e-6280.42Show/hide
Query:  MRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSPMFLTKGKIQEHDAYCLTTHWNSFVAKN
        MRK+IE+MHGYNLQ+VI+KKLI+ DMN+KDGR+F  IK I FDF+TP E+E+LNDANGV+EVKI+DE QRVSPMFLTKGKI+EHD Y  TTHWNSFV KN
Subjt:  MRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSPMFLTKGKIQEHDAYCLTTHWNSFVAKN

Query:  CLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL
        CLK G+LIQLWSFRRVRL+DIDNEIFTSDLYFALNTMDGRC L
Subjt:  CLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL

A0A6J1FJF6 B3 domain-containing protein At1g05930-like5.6e-9298.24Show/hide
Query:  MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSP
        MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEM GYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEE+LLNDANGVMEVKILDEGQRVSP
Subjt:  MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSP

Query:  MFLTKGKIQEHDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL
        MFLTKGKIQEHDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDI+NEIFTSDLYFALNTMDGRCFL
Subjt:  MFLTKGKIQEHDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL

A0A6J1I325 B3 domain-containing protein At2g31420-like1.4e-6382.52Show/hide
Query:  MRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSPMFLTKGKIQEHDAYCLTTHWNSFVAKN
        MRKQIE+MHGYNLQ+VI+KKLI+ DMN+KDGR+F  IK + FDF+TP E+ELLNDANGVMEVKI+DE QRVSPMFLTKGKI+EHD Y  TTHWNSFV KN
Subjt:  MRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSPMFLTKGKIQEHDAYCLTTHWNSFVAKN

Query:  CLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL
        CLK G+LIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRC L
Subjt:  CLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL

SwissProt top hitse value%identityAlignment
Q9SIC7 B3 domain-containing protein At2g314205.9e-0627.2Show/hide
Query:  MPTRMRKQIEEMHGYNLQLVIHKK-LIETDMNEKDGRLFLIIKKI-LFDFITPDE-----EELLNDANGVMEVKILDEGQRVSPMFLTKGKIQEHDAYCL
        +P  + K + + +GY+ +L+I ++ L  TD+ +  G L + + K+   DF+T DE     E+ L      ++V ++D       ++L K        Y L
Subjt:  MPTRMRKQIEEMHGYNLQLVIHKK-LIETDMNEKDGRLFLIIKKI-LFDFITPDE-----EELLNDANGVMEVKILDEGQRVSPMFLTKGKIQEHDAYCL

Query:  TTHWNSFVAKNCLKIGHLIQLWSFR
        +  WN+ + K   K+  +I++WSFR
Subjt:  TTHWNSFVAKNCLKIGHLIQLWSFR

Arabidopsis top hitse value%identityAlignment
AT2G31420.1 Domain of unknown function (DUF313)4.2e-0727.2Show/hide
Query:  MPTRMRKQIEEMHGYNLQLVIHKK-LIETDMNEKDGRLFLIIKKI-LFDFITPDE-----EELLNDANGVMEVKILDEGQRVSPMFLTKGKIQEHDAYCL
        +P  + K + + +GY+ +L+I ++ L  TD+ +  G L + + K+   DF+T DE     E+ L      ++V ++D       ++L K        Y L
Subjt:  MPTRMRKQIEEMHGYNLQLVIHKK-LIETDMNEKDGRLFLIIKKI-LFDFITPDE-----EELLNDANGVMEVKILDEGQRVSPMFLTKGKIQEHDAYCL

Query:  TTHWNSFVAKNCLKIGHLIQLWSFR
        +  WN+ + K   K+  +I++WSFR
Subjt:  TTHWNSFVAKNCLKIGHLIQLWSFR

AT5G38490.1 Domain of unknown function (DUF313)4.4e-0428.45Show/hide
Query:  QLVIHKKLIETDMNEKDGRLFLIIKKIL-FDFITP------------DEEELLNDANGVMEV--KILDEGQRVSPMFLTKGKIQEHDAYCLTTHWNSFVA
        +L+  + L ++D+N    RL +  +K++  DF+TP            DEE+  N   G + V  +    G R     + K        Y L   WN  V 
Subjt:  QLVIHKKLIETDMNEKDGRLFLIIKKIL-FDFITP------------DEEELLNDANGVMEV--KILDEGQRVSPMFLTKGKIQEHDAYCLTTHWNSFVA

Query:  KNCLKIGHLIQLWSFR
         + LK+G  I LW+FR
Subjt:  KNCLKIGHLIQLWSFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGTTTCTCCATATCCATCGATGTCAAAGTGGCGCAATGCATTCTTTCTAATCACAACGCCGGACATGCCAACTCGGATGCGAAAGCAGATCGAGGAGATGCATGG
ATACAATCTTCAGTTGGTGATTCATAAGAAATTAATAGAAACTGATATGAACGAGAAAGATGGCCGTTTGTTTCTTATAATCAAGAAAATCTTATTCGATTTCATCACCC
CAGACGAGGAGGAGCTCTTGAATGATGCAAACGGAGTCATGGAAGTCAAGATTCTTGATGAGGGTCAAAGGGTGAGCCCCATGTTCTTGACCAAAGGCAAGATTCAAGAA
CATGATGCATATTGTTTGACCACTCATTGGAATTCTTTTGTCGCCAAAAATTGCTTGAAAATTGGCCACCTTATCCAACTTTGGAGTTTCAGAAGAGTTCGACTCGTAGA
CATAGATAACGAAATATTCACCTCTGATCTTTACTTTGCGTTGAATACCATGGATGGTCGATGTTTTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAGTTTCTCCATATCCATCGATGTCAAAGTGGCGCAATGCATTCTTTCTAATCACAACGCCGGACATGCCAACTCGGATGCGAAAGCAGATCGAGGAGATGCATGG
ATACAATCTTCAGTTGGTGATTCATAAGAAATTAATAGAAACTGATATGAACGAGAAAGATGGCCGTTTGTTTCTTATAATCAAGAAAATCTTATTCGATTTCATCACCC
CAGACGAGGAGGAGCTCTTGAATGATGCAAACGGAGTCATGGAAGTCAAGATTCTTGATGAGGGTCAAAGGGTGAGCCCCATGTTCTTGACCAAAGGCAAGATTCAAGAA
CATGATGCATATTGTTTGACCACTCATTGGAATTCTTTTGTCGCCAAAAATTGCTTGAAAATTGGCCACCTTATCCAACTTTGGAGTTTCAGAAGAGTTCGACTCGTAGA
CATAGATAACGAAATATTCACCTCTGATCTTTACTTTGCGTTGAATACCATGGATGGTCGATGTTTTCTTTAG
Protein sequenceShow/hide protein sequence
MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMHGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFDFITPDEEELLNDANGVMEVKILDEGQRVSPMFLTKGKIQE
HDAYCLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRCFL