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CmaCh12G012010 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh12G012010
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionmethyl-CpG-binding domain-containing protein 11-like
Genome locationCma_Chr12:9419447..9420075
RNA-Seq ExpressionCmaCh12G012010
SyntenyCmaCh12G012010
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021238.1 hypothetical protein SDJN02_17926, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-0696.43Show/hide
Query:  MAESVEKDTANEEVLSFELPAPPGWKKK
        MAESVEKDT+NEEVLSFELPAPPGWKKK
Subjt:  MAESVEKDTANEEVLSFELPAPPGWKKK

XP_022143242.1 methyl-CpG-binding domain-containing protein 11-like [Momordica charantia]1.4e-0483.33Show/hide
Query:  MAESVEKDTANEEVLSFELPAPPGWKKKGF
        MA SV+KD+ANEEV+SFELPAPPGWKKK F
Subjt:  MAESVEKDTANEEVLSFELPAPPGWKKKGF

XP_022937827.1 methyl-CpG-binding domain-containing protein 11-like isoform X1 [Cucurbita moschata]4.3e-0693.33Show/hide
Query:  MAESVEKDTANEEVLSFELPAPPGWKKKGF
        MAESVEKDT+NEEVLSFELPAPPGWKKK F
Subjt:  MAESVEKDTANEEVLSFELPAPPGWKKKGF

XP_022965862.1 methyl-CpG-binding domain-containing protein 11-like isoform X1 [Cucurbita maxima]1.9e-0696.67Show/hide
Query:  MAESVEKDTANEEVLSFELPAPPGWKKKGF
        MAESVEKDTANEEVLSFELPAPPGWKKK F
Subjt:  MAESVEKDTANEEVLSFELPAPPGWKKKGF

XP_023537783.1 methyl-CpG-binding domain-containing protein 10-like isoform X1 [Cucurbita pepo subsp. pepo]4.3e-0693.33Show/hide
Query:  MAESVEKDTANEEVLSFELPAPPGWKKKGF
        MAESVEKDT+NEEVLSFELPAPPGWKKK F
Subjt:  MAESVEKDTANEEVLSFELPAPPGWKKKGF

TrEMBL top hitse value%identityAlignment
A0A6J1CQ83 methyl-CpG-binding domain-containing protein 11-like6.7e-0583.33Show/hide
Query:  MAESVEKDTANEEVLSFELPAPPGWKKKGF
        MA SV+KD+ANEEV+SFELPAPPGWKKK F
Subjt:  MAESVEKDTANEEVLSFELPAPPGWKKKGF

A0A6J1FCB1 methyl-CpG-binding domain-containing protein 11-like isoform X12.1e-0693.33Show/hide
Query:  MAESVEKDTANEEVLSFELPAPPGWKKKGF
        MAESVEKDT+NEEVLSFELPAPPGWKKK F
Subjt:  MAESVEKDTANEEVLSFELPAPPGWKKKGF

A0A6J1G2N9 methyl-CpG-binding domain-containing protein 11-like1.1e-0463.64Show/hide
Query:  MAESVEKDTANEEVLSFELPAPPGWKKKGFFGE-NSPLVVSRVF
        MA SVEKDT NEE++S ELPAPPGWKKK F  + NSP     +F
Subjt:  MAESVEKDTANEEVLSFELPAPPGWKKKGFFGE-NSPLVVSRVF

A0A6J1HLG2 methyl-CpG-binding domain-containing protein 11-like isoform X19.4e-0796.67Show/hide
Query:  MAESVEKDTANEEVLSFELPAPPGWKKKGF
        MAESVEKDTANEEVLSFELPAPPGWKKK F
Subjt:  MAESVEKDTANEEVLSFELPAPPGWKKKGF

A0A6J1KA38 methyl-CpG-binding domain-containing protein 11-like8.8e-0565.91Show/hide
Query:  MAESVEKDTANEEVLSFELPAPPGWKKKGFFGE-NSPLVVSRVF
        MA SVEKDT NEEV+S ELPAPPGWKKK F  + NSP     +F
Subjt:  MAESVEKDTANEEVLSFELPAPPGWKKKGFFGE-NSPLVVSRVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCAGTGGAGAAAGACACTGCGAATGAGGAGGTTCTGTCCTTTGAACTCCCTGCCCCTCCTGGCTGGAAGAAAAAGGGTTTCTTTGGTGAGAATTCACCGCT
TGTAGTATCTAGGGTTTTTTCTGGAAGGTTGAATTATCGAATTTCTTGCTTAATCTATCTTTTCGCTTGGATTTCCAGTCTTCTTCGACAGAATTCTCTGGAAATTGTTG
GTCTCTAG
mRNA sequenceShow/hide mRNA sequence
CTGGACATTCTGGATTTCTTTCTCAGAGAGAGAGAGAGGAGAGGAGAAAGAAGCATTGAATATAAAAGGAAGGGCAATCGCCGTCATTACCAAATTTGTCGCTGTAAATC
CATTTCTCTCCTCTGTTTTGGTTATGTGCAGCTAAGGAAGAAACCCAGAAACCCCAAATCGCGAATCCAAGTCATAAATGGCGGAATCAGTGGAGAAAGACACTGCGAAT
GAGGAGGTTCTGTCCTTTGAACTCCCTGCCCCTCCTGGCTGGAAGAAAAAGGGTTTCTTTGGTGAGAATTCACCGCTTGTAGTATCTAGGGTTTTTTCTGGAAGGTTGAA
TTATCGAATTTCTTGCTTAATCTATCTTTTCGCTTGGATTTCCAGTCTTCTTCGACAGAATTCTCTGGAAATTGTTGGTCTCTAG
Protein sequenceShow/hide protein sequence
MAESVEKDTANEEVLSFELPAPPGWKKKGFFGENSPLVVSRVFSGRLNYRISCLIYLFAWISSLLRQNSLEIVGL