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CmaCh12G012700 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh12G012700
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Genome locationCma_Chr12:9903694..9904062
RNA-Seq ExpressionCmaCh12G012700
SyntenyCmaCh12G012700
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586449.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]2.7e-5894.31Show/hide
Query:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSV-GD
        MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQ IITEPPSVVV+D PTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQ+CISSWLSV GD
Subjt:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSV-GD

Query:  CCPLCRCHVSSDNKLETTKPVQV
        CCPLCRCHVSSDNK ET KPVQV
Subjt:  CCPLCRCHVSSDNKLETTKPVQV

KAG7021303.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-5995.12Show/hide
Query:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSV-GD
        MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQ IITEPPSVVV+DLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQ+CISSWLSV GD
Subjt:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSV-GD

Query:  CCPLCRCHVSSDNKLETTKPVQV
        CCPLCRCHVSSDNK ET KPVQV
Subjt:  CCPLCRCHVSSDNKLETTKPVQV

XP_022938297.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]3.5e-5894.31Show/hide
Query:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSV-GD
        MAAVLPEATRSAFAA YIMDLESMFDLDTVLTGADDYYNDQ IITEPPSVVV+DLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQ+CISSWLSV GD
Subjt:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSV-GD

Query:  CCPLCRCHVSSDNKLETTKPVQV
        CCPLCRCHVSSDNK ET KPVQV
Subjt:  CCPLCRCHVSSDNKLETTKPVQV

XP_022965415.1 E3 ubiquitin-protein ligase RNF181-like [Cucurbita maxima]4.3e-64100Show/hide
Query:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDC
        MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDC
Subjt:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDC

Query:  CPLCRCHVSSDNKLETTKPVQV
        CPLCRCHVSSDNKLETTKPVQV
Subjt:  CPLCRCHVSSDNKLETTKPVQV

XP_023537996.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]3.8e-6095.9Show/hide
Query:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDC
        MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQ IITEPPSVVV+DLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQ+CISSWLSVGDC
Subjt:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDC

Query:  CPLCRCHVSSDNKLETTKPVQV
        CPLCRCHVSSDNK ET KPVQV
Subjt:  CPLCRCHVSSDNKLETTKPVQV

TrEMBL top hitse value%identityAlignment
A0A0A0LEZ1 RING-type domain-containing protein3.0e-3968.97Show/hide
Query:  ATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTV-VTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRC
        AT + +AASYIMD+ESMFDLDTVLTGADD+Y    ++  PP V+V++LPTV   DDVCAVCME+F  DEGGKQIPCGHVYHQSC+SSWLS+ D CPLCRC
Subjt:  ATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTV-VTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRC

Query:  HVSSDNKLETTKPVQV
        H++  +K ET+K VQV
Subjt:  HVSSDNKLETTKPVQV

A0A5A7V793 RING-H2 finger protein ATL5-like1.8e-3971.3Show/hide
Query:  ATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCH
        AT +  AA YIMD+ESMFDLDTVL+GADD+Y     +  PP VVV+DLPTV TDD CAVCME+F  DEGGKQIPCGHVYHQSCISSWLSVGD CPLCR H
Subjt:  ATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCH

Query:  VSSDNKLETTKPVQV
        ++  +K ET+K VQV
Subjt:  VSSDNKLETTKPVQV

A0A6J1DM93 E3 ubiquitin-protein ligase RHA1B-like2.9e-2657.26Show/hide
Query:  AVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCP
        AVL E TR+  AA+Y M+L  +FDLD VL+G DD+    +        +V+DLPTVV  DVCAVC E+FR+DEGGKQIPCGHVYH+ CISSWL+V DCCP
Subjt:  AVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCP

Query:  LCRCHVSSDNKLETTKP
        LCR  V       T+ P
Subjt:  LCRCHVSSDNKLETTKP

A0A6J1FDN7 E3 ubiquitin-protein ligase RING1-like1.7e-5894.31Show/hide
Query:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSV-GD
        MAAVLPEATRSAFAA YIMDLESMFDLDTVLTGADDYYNDQ IITEPPSVVV+DLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQ+CISSWLSV GD
Subjt:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSV-GD

Query:  CCPLCRCHVSSDNKLETTKPVQV
        CCPLCRCHVSSDNK ET KPVQV
Subjt:  CCPLCRCHVSSDNKLETTKPVQV

A0A6J1HNM2 E3 ubiquitin-protein ligase RNF181-like2.1e-64100Show/hide
Query:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDC
        MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDC
Subjt:  MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDC

Query:  CPLCRCHVSSDNKLETTKPVQV
        CPLCRCHVSSDNKLETTKPVQV
Subjt:  CPLCRCHVSSDNKLETTKPVQV

SwissProt top hitse value%identityAlignment
Q6AVN2 E3 ubiquitin-protein ligase SIRP12.4e-0935.62Show/hide
Query:  VSDLPTVVTDDV--CAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDNKLETTKPVQV
        V  LPTV  ++V  C+VC+++       KQ+PC H +H SCI  WL +   CP+CR  + S+   +  +P  +
Subjt:  VSDLPTVVTDDV--CAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDNKLETTKPVQV

Q8LPN7 E3 ubiquitin-protein ligase RING1-like8.3e-1040.48Show/hide
Query:  NDQMIITEPPS--VVVSDLPTV-VTDDV-------CAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDN
        ND      PP+    +  LPTV VT D+       CAVCM+EF      KQ+PC HV+HQ C+  WL + + CP+CR  + +D+
Subjt:  NDQMIITEPPS--VVVSDLPTV-VTDDV-------CAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDN

Q9D0C1 E3 ubiquitin-protein ligase RNF1152.4e-0936.71Show/hide
Query:  DQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDNKLETTK
        D+  IT  P+V V+    V T   C VC E++  +E  +Q+PC H +H SCI  WL + D CP+CR  ++ ++    T+
Subjt:  DQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDNKLETTK

Q9SNB6 E3 ubiquitin-protein ligase RDUF11.8e-0943.75Show/hide
Query:  PSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSD
        P V +SD  T    + CAVC E F A   G+++PC H++H  CI  WLS+ + CP+CR  + SD
Subjt:  PSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSD

Q9VHI7 E3 ubiquitin-protein ligase Iruka7.0e-0931.58Show/hide
Query:  LDTVLTGADDYYNDQMIITEPPSVV---VSDLPTVV--TDDV-----CAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSD
        LDT++T       +QM  + PP +    ++++P V    ++V     C++C ++F+ DE  +++PC H+YH++CI  WL++   CP+CR  ++ D
Subjt:  LDTVLTGADDYYNDQMIITEPPSVV---VSDLPTVV--TDDV-----CAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSD

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein2.4e-1236.73Show/hide
Query:  FDLDTVLTGADDYYNDQM---IITEPP----------SVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVS
        F+ D ++   D+ + D M    I  PP          +V+++D   +V + VCA+C EEF   E GK++ C H+YH SCI SWL++ + CP+CR  V+
Subjt:  FDLDTVLTGADDYYNDQM---IITEPP----------SVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVS

AT3G19950.1 RING/U-box superfamily protein5.9e-1140.48Show/hide
Query:  NDQMIITEPPS--VVVSDLPTV-VTDDV-------CAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDN
        ND      PP+    +  LPTV VT D+       CAVCM+EF      KQ+PC HV+HQ C+  WL + + CP+CR  + +D+
Subjt:  NDQMIITEPPS--VVVSDLPTV-VTDDV-------CAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDN

AT3G30460.1 RING/U-box superfamily protein1.0e-1052Show/hide
Query:  VCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDN
        VCA+C EE  A+E   ++PC H YH+ CIS+WLS  + CPLCR +V   N
Subjt:  VCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDN

AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein1.3e-1043.75Show/hide
Query:  PSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSD
        P V +SD  T    + CAVC E F A   G+++PC H++H  CI  WLS+ + CP+CR  + SD
Subjt:  PSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSD

AT3G60080.1 RING/U-box superfamily protein1.7e-1037.84Show/hide
Query:  PSVVVSDLPTVVTDD-------VCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDNKL
        P++ +S      TDD       +CAVC E+F   E  +++PC H+YH  CI  WLS  + CPLCR  + +  K+
Subjt:  PSVVVSDLPTVVTDD-------VCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDNKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTGTCTTGCCAGAAGCAACAAGATCAGCTTTTGCAGCGAGCTACATCATGGACCTTGAATCCATGTTCGATCTCGACACGGTCCTCACCGGTGCCGATGACTA
TTATAACGACCAGATGATCATCACAGAGCCGCCGTCCGTGGTGGTTTCCGATTTGCCAACGGTGGTCACAGACGACGTATGTGCAGTTTGTATGGAGGAATTCCGGGCGG
ATGAAGGTGGTAAACAGATCCCCTGCGGTCATGTGTACCATCAAAGTTGTATATCCTCATGGCTCTCCGTCGGCGACTGTTGCCCTCTCTGCCGCTGCCACGTCTCCTCC
GACAACAAATTGGAAACTACTAAACCCGTTCAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTGTCTTGCCAGAAGCAACAAGATCAGCTTTTGCAGCGAGCTACATCATGGACCTTGAATCCATGTTCGATCTCGACACGGTCCTCACCGGTGCCGATGACTA
TTATAACGACCAGATGATCATCACAGAGCCGCCGTCCGTGGTGGTTTCCGATTTGCCAACGGTGGTCACAGACGACGTATGTGCAGTTTGTATGGAGGAATTCCGGGCGG
ATGAAGGTGGTAAACAGATCCCCTGCGGTCATGTGTACCATCAAAGTTGTATATCCTCATGGCTCTCCGTCGGCGACTGTTGCCCTCTCTGCCGCTGCCACGTCTCCTCC
GACAACAAATTGGAAACTACTAAACCCGTTCAGGTTTAG
Protein sequenceShow/hide protein sequence
MAAVLPEATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVVTDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSS
DNKLETTKPVQV