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CmaCh13G005390 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh13G005390
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionEndosomal targeting BRO1-like domain-containing protein
Genome locationCma_Chr13:5609456..5613321
RNA-Seq ExpressionCmaCh13G005390
SyntenyCmaCh13G005390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583904.1 hypothetical protein SDJN03_19836, partial [Cucurbita argyrosperma subsp. sororia]2.0e-0894.44Show/hide
Query:  QIGRNVSGAPQVFDEMRQRDVGALERNVNATAHVLK
        +IGRNVSGAPQVFDEMRQRDVGALERNVNATA VLK
Subjt:  QIGRNVSGAPQVFDEMRQRDVGALERNVNATAHVLK
KAG7019522.1 hypothetical protein SDJN02_18483 [Cucurbita argyrosperma subsp. argyrosperma]7.9e-1092.31Show/hide
Query:  QIGRNVSGAPQVFDEMRQRDVGALERNVNATAHVLKGNK
        +IGRNVSGAPQVFDEMRQRDVGALERNVNATA VLKGN+
Subjt:  QIGRNVSGAPQVFDEMRQRDVGALERNVNATAHVLKGNK
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G17940.1 Endosomal targeting BRO1-like domain-containing protein1.4e-0451.22Show/hide
Query:  VSLQRTLRPHLTKATLAVKRRLACEMVKHWHQIGRNVSGAP
        V +Q  +    +KATLAVKRRL+CEMVK+W Q   N+   P
Subjt:  VSLQRTLRPHLTKATLAVKRRLACEMVKHWHQIGRNVSGAP
AT1G73390.1 Endosomal targeting BRO1-like domain-containing protein1.8e-0451.22Show/hide
Query:  VSLQRTLRPHLTKATLAVKRRLACEMVKHWHQIGRNVSGAP
        V +Q  +     KATLAVKRRL+CEMVK+W Q   N+   P
Subjt:  VSLQRTLRPHLTKATLAVKRRLACEMVKHWHQIGRNVSGAP
AT1G73390.2 Endosomal targeting BRO1-like domain-containing protein1.8e-0451.22Show/hide
Query:  VSLQRTLRPHLTKATLAVKRRLACEMVKHWHQIGRNVSGAP
        V +Q  +     KATLAVKRRL+CEMVK+W Q   N+   P
Subjt:  VSLQRTLRPHLTKATLAVKRRLACEMVKHWHQIGRNVSGAP
AT1G73390.3 Endosomal targeting BRO1-like domain-containing protein1.8e-0451.22Show/hide
Query:  VSLQRTLRPHLTKATLAVKRRLACEMVKHWHQIGRNVSGAP
        V +Q  +     KATLAVKRRL+CEMVK+W Q   N+   P
Subjt:  VSLQRTLRPHLTKATLAVKRRLACEMVKHWHQIGRNVSGAP
AT1G73390.4 Endosomal targeting BRO1-like domain-containing protein1.8e-0451.22Show/hide
Query:  VSLQRTLRPHLTKATLAVKRRLACEMVKHWHQIGRNVSGAP
        V +Q  +     KATLAVKRRL+CEMVK+W Q   N+   P
Subjt:  VSLQRTLRPHLTKATLAVKRRLACEMVKHWHQIGRNVSGAP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATACCGAAGTTTTCCGGCGAGCGTAACCCAAACTCCGGCGACTACGAATACGTCAGCCTCCAACGAACCCTTAGACCTCACCTCACCAAAGCAACCCTTGCTGT
GAAGCGAAGGCTTGCATGCGAGATGGTAAAACACTGGCACCAGATTGGACGAAACGTCAGTGGGGCACCTCAAGTGTTCGACGAAATGCGCCAAAGAGACGTGGGGGCTT
TGGAGCGCAATGTTAATGCAACTGCCCATGTCCTGAAAGGAAACAAAACCCCAAACCGCCAAAGCCATGGCAACACCTTTCAGTCCACTCATCTTATCATGAAACAAGAA
CACCGCCGCAACAGGAACTATAGGAAACCCCAGTACACAAACAGCATTGGAAAACAGAGAAGAAACCTCAAATATCAAACCAACACACCCAAGAGTGAAAACCTTCCACA
AAATGGCAGTCCAAACCACTGTCATAATGAAGATGGGGAAGCCTGCTACTTGGACCAAGGTTCCAAGCCATTTGCTTTTGCCTCCTTTGTCAAAGTAGAGTCTTCCAAGG
AGGGCACTTTTCTTGAGCTTCTGCCATGGCTGAAAGTGAAGAGCTTCCTGAGAGAGATGGTGAGGAACCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATACCGAAGTTTTCCGGCGAGCGTAACCCAAACTCCGGCGACTACGAATACGTCAGCCTCCAACGAACCCTTAGACCTCACCTCACCAAAGCAACCCTTGCTGT
GAAGCGAAGGCTTGCATGCGAGATGGTAAAACACTGGCACCAGATTGGACGAAACGTCAGTGGGGCACCTCAAGTGTTCGACGAAATGCGCCAAAGAGACGTGGGGGCTT
TGGAGCGCAATGTTAATGCAACTGCCCATGTCCTGAAAGGAAACAAAACCCCAAACCGCCAAAGCCATGGCAACACCTTTCAGTCCACTCATCTTATCATGAAACAAGAA
CACCGCCGCAACAGGAACTATAGGAAACCCCAGTACACAAACAGCATTGGAAAACAGAGAAGAAACCTCAAATATCAAACCAACACACCCAAGAGTGAAAACCTTCCACA
AAATGGCAGTCCAAACCACTGTCATAATGAAGATGGGGAAGCCTGCTACTTGGACCAAGGTTCCAAGCCATTTGCTTTTGCCTCCTTTGTCAAAGTAGAGTCTTCCAAGG
AGGGCACTTTTCTTGAGCTTCTGCCATGGCTGAAAGTGAAGAGCTTCCTGAGAGAGATGGTGAGGAACCTATGAAGAAGAAAGAACAGACCATTCAAAGAATTGATTCAT
TAGCTCATCATAAGAAGCCTGCAACTTTGTTTTTTTTTTTTTCTCTCAGTGAAGAACAATCCAAAACAATGTTCTTCCCTTTTATCCCCTTCTTGGACAAAAAAGTTGAC
C
Protein sequenceShow/hide protein sequence
MEIPKFSGERNPNSGDYEYVSLQRTLRPHLTKATLAVKRRLACEMVKHWHQIGRNVSGAPQVFDEMRQRDVGALERNVNATAHVLKGNKTPNRQSHGNTFQSTHLIMKQE
HRRNRNYRKPQYTNSIGKQRRNLKYQTNTPKSENLPQNGSPNHCHNEDGEACYLDQGSKPFAFASFVKVESSKEGTFLELLPWLKVKSFLREMVRNL