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CmaCh13G009100 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh13G009100
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionB12D
Genome locationCma_Chr13:7281557..7282975
RNA-Seq ExpressionCmaCh13G009100
SyntenyCmaCh13G009100
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64280.1 hypothetical protein Csa_013651 [Cucumis sativus]6.0e-4291.49Show/hide
Query:  MAPST-VNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPS+ ++RWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRVTKENRAAGVLDNF EGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPST-VNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_008437938.1 PREDICTED: uncharacterized protein LOC103483212 [Cucumis melo]2.7e-4292.55Show/hide
Query:  MAP-STVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAP ST++RWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENRAAGVLDNF EGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAP-STVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_022137737.1 uncharacterized protein LOC111009092 [Momordica charantia]1.1e-4394.62Show/hide
Query:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSTV+RWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRV+KENR+AGVLDNF EGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_022924187.1 uncharacterized protein LOC111431708 [Cucurbita moschata]1.2e-4598.92Show/hide
Query:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNF EGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_023000853.1 uncharacterized protein LOC111495175 [Cucurbita maxima]1.4e-46100Show/hide
Query:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
TrEMBL top hitse value%identityAlignment
A0A1S3AVT0 uncharacterized protein LOC1034832121.3e-4292.55Show/hide
Query:  MAP-STVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAP ST++RWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENRAAGVLDNF EGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAP-STVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A5A7UIX5 Uncharacterized protein1.3e-4292.55Show/hide
Query:  MAP-STVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAP ST++RWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENRAAGVLDNF EGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAP-STVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A6J1C941 uncharacterized protein LOC1110090925.3e-4494.62Show/hide
Query:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSTV+RWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRV+KENR+AGVLDNF EGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A6J1E888 uncharacterized protein LOC1114317085.7e-4698.92Show/hide
Query:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNF EGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A6J1KNV1 uncharacterized protein LOC1114951756.7e-47100Show/hide
Query:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29970.1 B12D protein8.7e-2350.6Show/hide
Query:  VNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFT
        + RW+RPEVYPL  A+G    +  FQL RN  +NP+ R+ KE+R  G+L+N DEGEKY +H  RK++R + P++MPS+N FF+
Subjt:  VNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFT
AT3G48140.1 B12D protein2.0e-3578.82Show/hide
Query:  NRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPS
        +RWLRPEVYPLFAA GVAVGIC F L+RNI  NPEVR TKENRAAG+LDN  EGEKY E+FLRKFVRNK PEIMP +N FFTDP+
Subjt:  NRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTTCCACCGTTAATCGATGGCTGAGACCTGAGGTTTACCCACTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCTGCGGGTTTCAGTTAGTCCGTAACATCTG
CATCAATCCTGAAGTCAGAGTGACCAAGGAGAATAGAGCCGCTGGAGTCCTGGATAACTTTGATGAGGGAGAGAAGTATACCGAGCATTTCCTGAGGAAATTCGTGCGCA
ACAAGTCACCAGAAATTATGCCGTCGATCAACAACTTCTTCACAGACCCAAGTCGAAACTAA
mRNA sequenceShow/hide mRNA sequence
TAAAGTCTCATCTCCTTCGCCCCCACAACTCTCCGACTCAGTAGCGTCTTAGTCTCCTCGATCCGCTTCCTTCCCCGAGATTCGTCAATGGCTCCTTCCACCGTTAATCG
ATGGCTGAGACCTGAGGTTTACCCACTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCTGCGGGTTTCAGTTAGTCCGTAACATCTGCATCAATCCTGAAGTCAGAGTGA
CCAAGGAGAATAGAGCCGCTGGAGTCCTGGATAACTTTGATGAGGGAGAGAAGTATACCGAGCATTTCCTGAGGAAATTCGTGCGCAACAAGTCACCAGAAATTATGCCG
TCGATCAACAACTTCTTCACAGACCCAAGTCGAAACTAAGATCCTACATGAATGAACTACACATAAGTTTGGATATAGTTTCGAATTTGAATAGTTGGTGGCTGTAAACA
CCATTCTGTTCTTGAATTTGCTTTTATTTGTTTGATGAAATAAACTGTTCTGAACCAAAATTATGAAATTCTGATTTTCATCTATGCACATCGAATGGTTTTTGTTAATG
GATATGTGAATTGACCGATTCTATATTACAAGTTATAAATGTGTTTGGAGCTTCAGAGTCTTGGTTGTGGAACATTCTTTTTGGGGGAATAGGAAAGCTTTTGATGATTC
AATGAAATTCAACTTTGTGATCAAGACATATTACACAGATGTTTATTGCAAGTATATTTTCAAATTTGGATGGACT
Protein sequenceShow/hide protein sequence
MAPSTVNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFDEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN