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CmaCh14G001920 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh14G001920
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionDNA helicase
Genome locationCma_Chr14:819285..820426
RNA-Seq ExpressionCmaCh14G001920
SyntenyCmaCh14G001920
Gene Ontology termsGO:0032501 - multicellular organismal process (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003678 - DNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR001208 - MCM domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR031327 - Mini-chromosome maintenance protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580586.1 putative DNA helicase MCM8, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3896.47Show/hide
Query:  MDIGGGNYLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVK
        MDIGGGNYLYLAAVSIKNSKSQSIH RSCNILTLMQEK SCLIFSHSPKRL FIMKFFSGECGSDVFCQILQSLCSSIYGHELVK
Subjt:  MDIGGGNYLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVK

KAG7017341.1 putative DNA helicase MCM8, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-3887.23Show/hide
Query:  MDIGGGNYLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLVLFG
        MDIGGGNYLYLAAVSIKNSKSQSIH RSCNILTLMQEK SCLIFSHSPKRL FIMKFFSGECGSDVFCQILQSLCSSIYGHELV + +  + +G
Subjt:  MDIGGGNYLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLVLFG

XP_023538746.1 probable DNA helicase MCM8 isoform X4 [Cucurbita pepo subsp. pepo]2.8e-2862.7Show/hide
Query:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV
        MDIGGG          YLYL AVSIKNSKSQS      +  +  +      +FS SP+ L FI+K FSGE GSDVF QILQS+C SIYGHELVK GITL 
Subjt:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV

Query:  LFGGVRKHSKDQNKVPVRWVIHFIDV
        LFGGVRKHSKDQNKVPVR  IH I V
Subjt:  LFGGVRKHSKDQNKVPVRWVIHFIDV

XP_038903978.1 probable DNA helicase MCM8 isoform X1 [Benincasa hispida]5.7e-2962.7Show/hide
Query:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV
        MDIGGG          YLYL AVSIKNSKSQS      +  +  +      +FS SP+ L FI+K FSGECG DVF QILQS+C SIYGHELVK GITL 
Subjt:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV

Query:  LFGGVRKHSKDQNKVPVRWVIHFIDV
        LFGGVRKHSKDQNKVPVR  IH I V
Subjt:  LFGGVRKHSKDQNKVPVRWVIHFIDV

XP_038903981.1 probable DNA helicase MCM8 isoform X3 [Benincasa hispida]5.7e-2962.7Show/hide
Query:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV
        MDIGGG          YLYL AVSIKNSKSQS      +  +  +      +FS SP+ L FI+K FSGECG DVF QILQS+C SIYGHELVK GITL 
Subjt:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV

Query:  LFGGVRKHSKDQNKVPVRWVIHFIDV
        LFGGVRKHSKDQNKVPVR  IH I V
Subjt:  LFGGVRKHSKDQNKVPVRWVIHFIDV

TrEMBL top hitse value%identityAlignment
A0A6A1WF97 Putative DNA helicase MCM81.4e-2861.11Show/hide
Query:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV
        MDIGGG          +LYL AVSIKNSKSQS+H  S +  +  +      +FS SP+ L FI+K FS E GSD+F QILQS+C SIYGHELVK GITL 
Subjt:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV

Query:  LFGGVRKHSKDQNKVPVRWVIHFIDV
        LFGGVRKHS+DQNKVPVR  IH I V
Subjt:  LFGGVRKHSKDQNKVPVRWVIHFIDV

A0A6J1KSD1 DNA helicase1.4e-2862.7Show/hide
Query:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV
        MDIGGG          YLYL AVSIKNSKSQS      +  +  +      +FS SP+ L FI+K FSGE GSDVF QILQS+C SIYGHELVK GITL 
Subjt:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV

Query:  LFGGVRKHSKDQNKVPVRWVIHFIDV
        LFGGVRKHSKDQNKVPVR  IH I V
Subjt:  LFGGVRKHSKDQNKVPVRWVIHFIDV

A0A6J1KU61 DNA helicase1.4e-2862.7Show/hide
Query:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV
        MDIGGG          YLYL AVSIKNSKSQS      +  +  +      +FS SP+ L FI+K FSGE GSDVF QILQS+C SIYGHELVK GITL 
Subjt:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV

Query:  LFGGVRKHSKDQNKVPVRWVIHFIDV
        LFGGVRKHSKDQNKVPVR  IH I V
Subjt:  LFGGVRKHSKDQNKVPVRWVIHFIDV

A0A6J1KWN6 DNA helicase1.4e-2862.7Show/hide
Query:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV
        MDIGGG          YLYL AVSIKNSKSQS      +  +  +      +FS SP+ L FI+K FSGE GSDVF QILQS+C SIYGHELVK GITL 
Subjt:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV

Query:  LFGGVRKHSKDQNKVPVRWVIHFIDV
        LFGGVRKHSKDQNKVPVR  IH I V
Subjt:  LFGGVRKHSKDQNKVPVRWVIHFIDV

A0A6J1L1E9 DNA helicase1.4e-2862.7Show/hide
Query:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV
        MDIGGG          YLYL AVSIKNSKSQS      +  +  +      +FS SP+ L FI+K FSGE GSDVF QILQS+C SIYGHELVK GITL 
Subjt:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV

Query:  LFGGVRKHSKDQNKVPVRWVIHFIDV
        LFGGVRKHSKDQNKVPVR  IH I V
Subjt:  LFGGVRKHSKDQNKVPVRWVIHFIDV

SwissProt top hitse value%identityAlignment
B8AZ14 Probable DNA helicase MCM84.1e-2252.38Show/hide
Query:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV
        MD+GGG          YLYL A+S++NSK   +H  S N         S    + + K L FI K F  E G+DVF QIL S C SIYGHELVK GITL 
Subjt:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV

Query:  LFGGVRKHSKDQNKVPVRWVIHFIDV
        LFGGV+KHS DQNKVPVR  IH + V
Subjt:  LFGGVRKHSKDQNKVPVRWVIHFIDV

B9FKM7 Probable DNA helicase MCM84.1e-2252.38Show/hide
Query:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV
        MD+GGG          YLYL A+S++NSK   +H  S N         S    + + K L FI K F  E G+DVF QIL S C SIYGHELVK GITL 
Subjt:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV

Query:  LFGGVRKHSKDQNKVPVRWVIHFIDV
        LFGGV+KHS DQNKVPVR  IH + V
Subjt:  LFGGVRKHSKDQNKVPVRWVIHFIDV

Q0V9Q6 DNA helicase MCM81.6e-1035.78Show/hide
Query:  LYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLVLFGGVRKHSKDQNKVPV
        LY+ A S+ NSK   I             +        S K L+ I +  + E   ++F  I+ SLC +IYGHELVK G++L LFGG +K++ D+N++P+
Subjt:  LYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLVLFGGVRKHSKDQNKVPV

Query:  RWVIHFIDV
        R   H + V
Subjt:  RWVIHFIDV

Q9SF37 Probable DNA helicase MCM81.2e-2452.38Show/hide
Query:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV
        MDIGGG          YL++ AVS+KN+K QS    S +  +  Q      ++S S + L FI+K F  E GSD F +IL S+C SIYGHE+VK GITL 
Subjt:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV

Query:  LFGGVRKHSKDQNKVPVRWVIHFIDV
        LFGGVRKHS D+NKVPVR  IH I V
Subjt:  LFGGVRKHSKDQNKVPVRWVIHFIDV

Q9UJA3 DNA helicase MCM84.7e-1035.71Show/hide
Query:  LYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSC---LIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLVLFGGVRKHSKDQNK
        LY+ A SI NSK Q               +  C   ++   S K L+ I +  + E   ++F  I+ SLC  I+GHELVK G+ L LFGG +K++ D+N+
Subjt:  LYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSC---LIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLVLFGGVRKHSKDQNK

Query:  VPVRWVIHFIDV
        +P+R   H + V
Subjt:  VPVRWVIHFIDV

Arabidopsis top hitse value%identityAlignment
AT3G09660.1 minichromosome maintenance 88.3e-2652.38Show/hide
Query:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV
        MDIGGG          YL++ AVS+KN+K QS    S +  +  Q      ++S S + L FI+K F  E GSD F +IL S+C SIYGHE+VK GITL 
Subjt:  MDIGGGN---------YLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLV

Query:  LFGGVRKHSKDQNKVPVRWVIHFIDV
        LFGGVRKHS D+NKVPVR  IH I V
Subjt:  LFGGVRKHSKDQNKVPVRWVIHFIDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATTGGAGGAGGCAACTATTTGTATCTGGCGGCTGTTTCAATAAAAAATTCCAAGTCACAGTCTATACACCCGAGGAGTTGCAACATTCTAACTCTAATGCAAGA
GAAACCGAGTTGCTTGATTTTTTCTCATTCTCCCAAGAGATTGCATTTTATTATGAAATTCTTCTCTGGGGAATGTGGTTCGGATGTCTTCTGTCAAATACTTCAATCCT
TATGTTCATCCATCTATGGACATGAACTTGTTAAAGTGGGAATAACACTAGTACTATTTGGTGGTGTACGAAAGCATTCAAAAGACCAGAATAAAGTCCCTGTTAGATGG
GTTATTCATTTCATAGATGTTGTTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATTGGAGGAGGCAACTATTTGTATCTGGCGGCTGTTTCAATAAAAAATTCCAAGTCACAGTCTATACACCCGAGGAGTTGCAACATTCTAACTCTAATGCAAGA
GAAACCGAGTTGCTTGATTTTTTCTCATTCTCCCAAGAGATTGCATTTTATTATGAAATTCTTCTCTGGGGAATGTGGTTCGGATGTCTTCTGTCAAATACTTCAATCCT
TATGTTCATCCATCTATGGACATGAACTTGTTAAAGTGGGAATAACACTAGTACTATTTGGTGGTGTACGAAAGCATTCAAAAGACCAGAATAAAGTCCCTGTTAGATGG
GTTATTCATTTCATAGATGTTGTTTCTTAG
Protein sequenceShow/hide protein sequence
MDIGGGNYLYLAAVSIKNSKSQSIHPRSCNILTLMQEKPSCLIFSHSPKRLHFIMKFFSGECGSDVFCQILQSLCSSIYGHELVKVGITLVLFGGVRKHSKDQNKVPVRW
VIHFIDVVS