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CmaCh14G002000 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh14G002000
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionDNA-binding protein S1FA-like
Genome locationCma_Chr14:861433..862970
RNA-Seq ExpressionCmaCh14G002000
SyntenyCmaCh14G002000
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006779 - DNA binding protein S1FA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651038.1 hypothetical protein Csa_000825 [Cucumis sativus]9.0e-3196.15Show/hide
Query:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        MASANGKGNVIND+EAKG NPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR+RLKQGVSAPGE
Subjt:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

XP_004137812.1 DNA-binding protein S1FA [Cucumis sativus]9.0e-3196.15Show/hide
Query:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        MASANGKGNVIND+EAKG NPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR+RLKQGVSAPGE
Subjt:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

XP_008442666.1 PREDICTED: DNA-binding protein S1FA-like [Cucumis melo]2.6e-3096.15Show/hide
Query:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        MASANGKGNVINDVEAKG NPALIVLLLVGGLLL FLVGNYALYLYAQKNLPPKKKKPVSKKKMKR+RLKQGVSAPGE
Subjt:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

XP_022934038.1 DNA-binding protein S1FA-like [Cucurbita moschata]8.1e-32100Show/hide
Query:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
Subjt:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

XP_038905724.1 DNA-binding protein S1FA-like [Benincasa hispida]6.9e-3197.44Show/hide
Query:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        MASANGKGNVINDVEAKG NPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR+RLKQGVSAPGE
Subjt:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

TrEMBL top hitse value%identityAlignment
A0A0A0LAW3 DNA-binding protein S1FA4.3e-3196.15Show/hide
Query:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        MASANGKGNVIND+EAKG NPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR+RLKQGVSAPGE
Subjt:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

A0A1S3B680 DNA-binding protein S1FA-like1.3e-3096.15Show/hide
Query:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        MASANGKGNVINDVEAKG NPALIVLLLVGGLLL FLVGNYALYLYAQKNLPPKKKKPVSKKKMKR+RLKQGVSAPGE
Subjt:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

A0A6J1F6J1 DNA-binding protein S1FA-like3.9e-32100Show/hide
Query:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
Subjt:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

A0A6J1IZV9 DNA-binding protein S1FA-like3.9e-32100Show/hide
Query:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
Subjt:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

A0A6J1KWU8 DNA-binding protein S1FA-like isoform X13.1e-2991.03Show/hide
Query:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        MASANGKGNV+NDV AKG NP L+VLLLVGGLLLIFL+GNYALYLYAQKNLPPKKKKPVSKKKMKR+RLKQGVSAPGE
Subjt:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

SwissProt top hitse value%identityAlignment
P42551 DNA-binding protein S1FA18.7e-2178.12Show/hide
Query:  EAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        EAKGLNP LIVLL+VGG LL+FL+ NY LY+YAQKNLPP+KKKPVSKKK+KR++LKQGV  PGE
Subjt:  EAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

P42552 DNA-binding protein S1FA8.4e-2480.88Show/hide
Query:  INDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        +N+VEAKGLNP LIVLL++GGLLL FLVGN+ LY YAQKNLPPKKKKP+SKKKMKR+RLKQGV+ PGE
Subjt:  INDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

Q42337 DNA-binding protein S1FA28.7e-2165.38Show/hide
Query:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        M+S    G  +  VEAKGLNP LIVLL++GGLL+ FL+ NY +Y+YAQKNLPP+KKKP+SKKK+KR++LKQGV  PGE
Subjt:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

Q7XLX6 DNA-binding protein S1FA21.9e-2068Show/hide
Query:  ANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        A+   NV+ +   KGLNP +IVL++V   LL+F VGNYALY+YAQK LPP+KKKPVSKKKMKR++LKQGVSAPGE
Subjt:  ANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

Q93VI0 DNA-binding protein S1FA38.7e-2175.38Show/hide
Query:  VEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        +E+KGLNP LIVLL++GGLLL FLVGN+ LY YAQKNLPP+KKKPVSKKKMK++++KQGV  PGE
Subjt:  VEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

Arabidopsis top hitse value%identityAlignment
AT2G37120.1 S1FA-like DNA-binding protein6.2e-2265.38Show/hide
Query:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        M+S    G  +  VEAKGLNP LIVLL++GGLL+ FL+ NY +Y+YAQKNLPP+KKKP+SKKK+KR++LKQGV  PGE
Subjt:  MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

AT3G09735.1 S1FA-like DNA-binding protein6.2e-2275.38Show/hide
Query:  VEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        +E+KGLNP LIVLL++GGLLL FLVGN+ LY YAQKNLPP+KKKPVSKKKMK++++KQGV  PGE
Subjt:  VEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

AT3G53370.1 S1FA-like DNA-binding protein6.2e-2278.12Show/hide
Query:  EAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        EAKGLNP LIVLL+VGG LL+FL+ NY LY+YAQKNLPP+KKKPVSKKK+KR++LKQGV  PGE
Subjt:  EAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE

AT3G53370.2 S1FA-like DNA-binding protein8.7e-0875.76Show/hide
Query:  YAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE
        +A KNLPP+KKKPVSKKK+KR++LKQGV  PGE
Subjt:  YAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAGCCAATGGCAAGGGCAACGTGATCAATGACGTTGAAGCAAAAGGATTGAATCCAGCGCTAATAGTTCTTCTTCTTGTTGGTGGGTTGCTGCTGATTTTCCT
CGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAATCTCCCTCCCAAGAAGAAAAAGCCAGTTTCTAAAAAGAAGATGAAGAGGGACAGACTGAAGCAAGGGGTGT
CTGCACCCGGAGAGTAA
mRNA sequenceShow/hide mRNA sequence
GGCCCATAGAAACTGCAGGACCCGGGTGGACCAAATCGCCGATTTATATGAATTTTCCCGTTTTCTTAGAGCTCGCCGACAATTTGTTTTTCCGTCAACGCTTCACCGCT
GATCCGATTTATACAATTGGCTTTAATTCAGGATCTTCCTGCCGGCCGATCTGTCCGGCTTTGAGTTGTAGACATGGCTTCAGCCAATGGCAAGGGCAACGTGATCAATG
ACGTTGAAGCAAAAGGATTGAATCCAGCGCTAATAGTTCTTCTTCTTGTTGGTGGGTTGCTGCTGATTTTCCTCGTAGGGAACTATGCACTTTACTTGTATGCACAGAAG
AATCTCCCTCCCAAGAAGAAAAAGCCAGTTTCTAAAAAGAAGATGAAGAGGGACAGACTGAAGCAAGGGGTGTCTGCACCCGGAGAGTAAAAAACAACAGAAAAGAGAGA
AAATTTAGCTCCCCGAGGTTTCCTTCTCTATAGAACGTTTTGATTCTCAAAATTTTCCTACATAGACTATCTTGAAAGTTGCTACAGGTATTTCCTATATCTGCTGTCTT
AAACTATTCAGTAATCGAACTTGATTATGAGTTTCTTAACTCTTATTACATGGGCTCTTTTCTCAACGTGCCATTGACTCTTCACTACTTATGCCCATCTTTTCTTTTTG
GCACACACCAGAAATATTTTTGTTTCTCCATTTTTGAACAGCCTTAGCTCAATGCTTTTTACTGTTGGAATCTTTTTTTTTTTTTGGACTGCAATGTGAGATCCCGCATC
AGTTGGGTAG
Protein sequenceShow/hide protein sequence
MASANGKGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRDRLKQGVSAPGE