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CmaCh14G006880 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh14G006880
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationCma_Chr14:3489496..3490772
RNA-Seq ExpressionCmaCh14G006880
SyntenyCmaCh14G006880
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581070.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]3.4e-32100Show/hide
Query:  DRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF
        DRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF
Subjt:  DRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF

KAG6588926.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]5.4e-3091.55Show/hide
Query:  MASQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCC
        MASQD+GRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN AAKNNA  PEENYQYSPMKKWFCC
Subjt:  MASQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCC

KGN58221.1 hypothetical protein Csa_017629 [Cucumis sativus]5.4e-3091.43Show/hide
Query:  SQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF
        + D+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK+N SR EENYQYSPMKKWFCCF
Subjt:  SQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF

XP_038883812.1 protein NOI4-like isoform X1 [Benincasa hispida]1.7e-3195.65Show/hide
Query:  QDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF
        QD+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNT AKNN SRPEENYQYSPMKKWFCCF
Subjt:  QDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF

XP_038883820.1 protein NOI4-like isoform X2 [Benincasa hispida]1.7e-3195.65Show/hide
Query:  QDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF
        QD+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNT AKNN SRPEENYQYSPMKKWFCCF
Subjt:  QDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF

TrEMBL top hitse value%identityAlignment
A0A0A0LDP9 AvrRpt-cleavage domain-containing protein2.6e-3091.43Show/hide
Query:  SQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF
        + D+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK+N SR EENYQYSPMKKWFCCF
Subjt:  SQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF

A0A2P5B5J0 RIN4, pathogenic type III effector avirulence factor Avr cleavage site5.2e-2374.36Show/hide
Query:  MASQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPG----NTAAKNNA--SRPEENYQYSPMKKWFCCF
        MASQD+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN A G    N    NN+  ++P E Y Y PMKKWFCCF
Subjt:  MASQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPG----NTAAKNNA--SRPEENYQYSPMKKWFCCF

A0A2P5FBR6 RIN4, pathogenic type III effector avirulence factor Avr cleavage site1.5e-2273.08Show/hide
Query:  MASQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPG----NTAAKNNA--SRPEENYQYSPMKKWFCCF
        MASQ++GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN A G    N    NN+  ++P E Y Y PMKKWFCCF
Subjt:  MASQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPG----NTAAKNNA--SRPEENYQYSPMKKWFCCF

A0A5D3E371 RPM1-interacting protein 4-like2.5e-2593.65Show/hide
Query:  SQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPM
        SQD+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK+N SR EENYQYSPM
Subjt:  SQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPM

B9SLS6 NOI, putative2.0e-2273.33Show/hide
Query:  MASQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAA---KNNASRPEENYQYSPMKKWFCCF
        M++QD+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN A G  AA    NN  +P++NYQ    KKWFCCF
Subjt:  MASQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAA---KNNASRPEENYQYSPMKKWFCCF

SwissProt top hitse value%identityAlignment
O22633 Protein NOI48.6e-1556.52Show/hide
Query:  DRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKNNASRPEENYQYSPMKKWFCC
        D+GRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+   +++ +      +      KKW CC
Subjt:  DRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKNNASRPEENYQYSPMKKWFCC

Q8GYN5 RPM1-interacting protein 42.8e-0538.03Show/hide
Query:  SQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN-EAPGNTAAKNNASRPEENYQYSPMKKWFCCF
        S ++   +PKFG+WD NNP+SA+G+T IF+K R+E+ S     G++    + S    N   S      CCF
Subjt:  SQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN-EAPGNTAAKNNASRPEENYQYSPMKKWFCCF

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein1.0e-1555.22Show/hide
Query:  DRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCC
        D+GRPLPKFGEWDVN+P+SAEGFTVIF+KAR+EKK      +                 P KKWFCC
Subjt:  DRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCC

AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein1.2e-1662.32Show/hide
Query:  QDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF
        Q + RPLPKFGEWDVN+PASAEGFTVIF+KARD+KK+N A G  A++    R     Q  P KK FCCF
Subjt:  QDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein6.8e-1579.07Show/hide
Query:  QDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
        +D+GRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+
Subjt:  QDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein4.7e-1655.71Show/hide
Query:  QDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKNNASRPEENYQYSPMKKWFCC
        +D+GRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+   +++ +      +      KKW CC
Subjt:  QDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKNNASRPEENYQYSPMKKWFCC

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein2.3e-1551.9Show/hide
Query:  SQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQY-----------SPMKKWFC
        ++++G+PLPKFGEWDVNNPASAEGFTVIFSKA DEKK+ +A G  A  N+   P+ N                  KWFC
Subjt:  SQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQY-----------SPMKKWFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGCAGGATAGAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCAACAACCCGGCCTCAGCCGAAGGCTTTACAGTAATATTTAGCAAAGCTAGA
GACGAGAAGAAGTCAAATGAGGCTCCGGGGAACACAGCAGCAAAAAACAATGCATCCAGACCAGAAGAGAATTATCAATATTCCCCCATGAAAAAATGGTTTTGC
TGTTTCTGA
mRNA sequenceShow/hide mRNA sequence
CTTTCTCTCAGTTTCATTTTCTGTGCACAAAGCTTTGTTAATGTATTTTAATGGCTTCGCAGGATAGAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCA
ACAACCCGGCCTCAGCCGAAGGCTTTACAGTAATATTTAGCAAAGCTAGAGACGAGAAGAAGTCAAATGAGGCTCCGGGGAACACAGCAGCAAAAAACAATGCAT
CCAGACCAGAAGAGAATTATCAATATTCCCCCATGAAAAAATGGTTTTGCTGTTTCTGA
Protein sequenceShow/hide protein sequence
MASQDRGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNASRPEENYQYSPMKKWFCCF