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CmaCh14G007580 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh14G007580
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr14:3782256..3782588
RNA-Seq ExpressionCmaCh14G007580
SyntenyCmaCh14G007580
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8021266.1 hypothetical protein FH972_007173 [Carpinus fangiana]8.2e-0645.19Show/hide
Query:  AAASFFCVALSLATLFAL----SPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISA-------APALESGEFIGKRSGSNSVKLNHGISAFGLS
        A ++ FC ALS+A  FA+    S +    ISASP V P+  S NMSSFFPSP D R    +A       AP   SGEF+GK S SNSV+   GI+  G+ 
Subjt:  AAASFFCVALSLATLFAL----SPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISA-------APALESGEFIGKRSGSNSVKLNHGISAFGLS

Query:  ICSV
        + S+
Subjt:  ICSV

KAG6621778.1 hypothetical protein I3842_Q002500 [Carya illinoinensis]1.2e-0443.36Show/hide
Query:  AAASFFCVALSLATLFALSPSAVS----AISASPPVPPHRASQNMSSFFPSP-VDGRSSPI------SAAPALESGEFIGKRSGSNSVKLNHGISAFGLS
        A  + FC A+S+A +FA+S +  S     ISASP V P+  + NMSSFFPSP V G  S        + AP   SGEF+GK S S+S +L+ GI   G  
Subjt:  AAASFFCVALSLATLFALSPSAVS----AISASPPVPPHRASQNMSSFFPSP-VDGRSSPI------SAAPALESGEFIGKRSGSNSVKLNHGISAFGLS

Query:  ICSVFGLRLVLNV
        + S+F   L+L V
Subjt:  ICSVFGLRLVLNV

XP_021642153.1 uncharacterized protein LOC110636664 [Hevea brasiliensis]5.3e-0543.59Show/hide
Query:  ATAAAAAAAASFFCVALSLATLFA--LSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAA---------PALESGEFIGKRSGSNSVKLNHG
        +++++AAAAA     A+SL  LF+  L+ S+   I+ASP V P+  + N+SSFFP+P +    P+S+A         P   SGEFIGK S S+S KLN  
Subjt:  ATAAAAAAAASFFCVALSLATLFA--LSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAA---------PALESGEFIGKRSGSNSVKLNHG

Query:  ISAFGLSICSVFGLRLV
        IS FG+ IC +F +R V
Subjt:  ISAFGLSICSVFGLRLV

XP_022934640.1 uncharacterized protein LOC111441775 [Cucurbita moschata]2.8e-3888.89Show/hide
Query:  AAAAASFFCVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAP----ALESGEFIGKRSGSNSVKLNHGISAFGLSICSVF
        A AAA+FFCVALSLA  FA+SP+AVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAP    ALESGEFIGKRSGSNSVKLNHGISAFGLSICSVF
Subjt:  AAAAASFFCVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAP----ALESGEFIGKRSGSNSVKLNHGISAFGLSICSVF

Query:  GLRLVLNV
         LRL LNV
Subjt:  GLRLVLNV

XP_022983589.1 uncharacterized protein LOC111482150 [Cucurbita maxima]6.2e-46100Show/hide
Query:  MATAAAAAAAASFFCVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAPALESGEFIGKRSGSNSVKLNHGISAFGLSICS
        MATAAAAAAAASFFCVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAPALESGEFIGKRSGSNSVKLNHGISAFGLSICS
Subjt:  MATAAAAAAAASFFCVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAPALESGEFIGKRSGSNSVKLNHGISAFGLSICS

Query:  VFGLRLVLNV
        VFGLRLVLNV
Subjt:  VFGLRLVLNV

TrEMBL top hitse value%identityAlignment
A0A5N6QUU6 Uncharacterized protein4.0e-0645.19Show/hide
Query:  AAASFFCVALSLATLFAL----SPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISA-------APALESGEFIGKRSGSNSVKLNHGISAFGLS
        A ++ FC ALS+A  FA+    S +    ISASP V P+  S NMSSFFPSP D R    +A       AP   SGEF+GK S SNSV+   GI+  G+ 
Subjt:  AAASFFCVALSLATLFAL----SPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISA-------APALESGEFIGKRSGSNSVKLNHGISAFGLS

Query:  ICSV
        + S+
Subjt:  ICSV

A0A6J1F8A3 uncharacterized protein LOC1114417751.4e-3888.89Show/hide
Query:  AAAAASFFCVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAP----ALESGEFIGKRSGSNSVKLNHGISAFGLSICSVF
        A AAA+FFCVALSLA  FA+SP+AVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAP    ALESGEFIGKRSGSNSVKLNHGISAFGLSICSVF
Subjt:  AAAAASFFCVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAP----ALESGEFIGKRSGSNSVKLNHGISAFGLSICSVF

Query:  GLRLVLNV
         LRL LNV
Subjt:  GLRLVLNV

A0A6J1J7U9 uncharacterized protein LOC1114821503.0e-46100Show/hide
Query:  MATAAAAAAAASFFCVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAPALESGEFIGKRSGSNSVKLNHGISAFGLSICS
        MATAAAAAAAASFFCVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAPALESGEFIGKRSGSNSVKLNHGISAFGLSICS
Subjt:  MATAAAAAAAASFFCVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAPALESGEFIGKRSGSNSVKLNHGISAFGLSICS

Query:  VFGLRLVLNV
        VFGLRLVLNV
Subjt:  VFGLRLVLNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCGCCGCCGCCGCCGCCGCCGCCGCCTCATTCTTCTGCGTTGCCTTGTCCCTGGCTACCCTTTTTGCCTTATCTCCATCAGCCGTCTCTGCAATATCG
GCTTCTCCACCTGTTCCGCCTCACAGAGCTTCCCAAAATATGTCTTCGTTTTTCCCATCTCCGGTCGATGGGCGTTCTTCTCCCATTTCTGCTGCTCCGGCGCTG
GAATCCGGCGAGTTCATAGGGAAGAGGAGTGGGTCCAATTCTGTGAAGCTCAATCATGGGATCTCAGCTTTTGGTTTGAGTATTTGTAGTGTTTTTGGTTTAAGA
CTGGTTCTTAACGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCGCCGCCGCCGCCGCCGCCGCCGCCTCATTCTTCTGCGTTGCCTTGTCCCTGGCTACCCTTTTTGCCTTATCTCCATCAGCCGTCTCTGCAATATCG
GCTTCTCCACCTGTTCCGCCTCACAGAGCTTCCCAAAATATGTCTTCGTTTTTCCCATCTCCGGTCGATGGGCGTTCTTCTCCCATTTCTGCTGCTCCGGCGCTG
GAATCCGGCGAGTTCATAGGGAAGAGGAGTGGGTCCAATTCTGTGAAGCTCAATCATGGGATCTCAGCTTTTGGTTTGAGTATTTGTAGTGTTTTTGGTTTAAGA
CTGGTTCTTAACGTTTGA
Protein sequenceShow/hide protein sequence
MATAAAAAAAASFFCVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAPALESGEFIGKRSGSNSVKLNHGISAFGLSICSVFGLR
LVLNV