; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh14G010760 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh14G010760
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description50S ribosomal protein L16, chloroplastic
Genome locationCma_Chr14:6391058..6397809
RNA-Seq ExpressionCmaCh14G010760
SyntenyCmaCh14G010760
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000114 - Ribosomal protein L16
IPR016180 - Ribosomal protein L10e/L16
IPR020798 - Ribosomal protein L16, conserved site
IPR036920 - Ribosomal protein L10e/L16 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM88685.1 ribosomal protein L16 [Lagenaria siceraria]4.6e-6399.2Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRG KIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAISIAASKMPIRTQFITS
Subjt:  AENIARKAISIAASKMPIRTQFITS

QJA16182.1 ribosomal protein L16 [Siraitia grosvenorii]1.3e-6298.4Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRG KIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM GV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAISIAASKMPIRTQFITS
Subjt:  AENIARKAISIAASKMPIRTQFITS

YP_009505117.1 ribosomal protein L16 [Cucurbita pepo]4.6e-6399.2Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRG KIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAISIAASKMPIRTQFITS
Subjt:  AENIARKAISIAASKMPIRTQFITS

YP_009752112.1 ribosomal protein L16 [Dendrosicyos socotranus]1.0e-6298.4Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRG KIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAI+IAASKMPIRTQFITS
Subjt:  AENIARKAISIAASKMPIRTQFITS

YP_009752703.1 ribosomal protein L16 [Ampelosycios humblotii]1.3e-6298.4Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRG KIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM GV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAISIAASKMPIRTQFITS
Subjt:  AENIARKAISIAASKMPIRTQFITS

TrEMBL top hitse value%identityAlignment
A0A344AXR1 50S ribosomal protein L16, chloroplastic2.2e-6399.2Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRG KIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAISIAASKMPIRTQFITS
Subjt:  AENIARKAISIAASKMPIRTQFITS

A0A6H0ET50 50S ribosomal protein L16, chloroplastic4.9e-6398.4Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRG KIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAI+IAASKMPIRTQFITS
Subjt:  AENIARKAISIAASKMPIRTQFITS

A0A6H0EX62 50S ribosomal protein L16, chloroplastic6.5e-6398.4Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRG KIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM GV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAISIAASKMPIRTQFITS
Subjt:  AENIARKAISIAASKMPIRTQFITS

A0A7T3QNM8 50S ribosomal protein L166.5e-6398.4Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRG KIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYE+SGV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAISIAASKMPIRTQFITS
Subjt:  AENIARKAISIAASKMPIRTQFITS

X2EZK1 50S ribosomal protein L16, chloroplastic2.2e-6399.2Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRG KIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAISIAASKMPIRTQFITS
Subjt:  AENIARKAISIAASKMPIRTQFITS

SwissProt top hitse value%identityAlignment
B1NWI7 50S ribosomal protein L16, chloroplastic8.1e-6394.4Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RK HRGRMKGI++RGNRICFGRYA+QALEPAWITSRQIEAGRRAMTRNARRG KIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM GV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAISIAASKMPIRTQFI S
Subjt:  AENIARKAISIAASKMPIRTQFITS

Q09ME0 50S ribosomal protein L16, chloroplastic4.8e-6395.2Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RK HRGRMKGISYRGN ICFGRYA+QALEPAWITSRQIEAGRRAMTRN RRG KIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAISIAASKMPIRTQFI S
Subjt:  AENIARKAISIAASKMPIRTQFITS

Q09WY0 50S ribosomal protein L16, chloroplastic4.8e-6393.6Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RKHHRGRMKGISYRGN ICFGRYA+QALEPAWITSRQIEAGRRAMTRNARRG KIWVRIFPDKP+T+RPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
         ENIARKAI+IAASKMPIRTQFI S
Subjt:  AENIARKAISIAASKMPIRTQFITS

Q2L940 50S ribosomal protein L16, chloroplastic6.2e-6394.4Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RK HRGRMKGISYRGNRICFGRYA+QALEPAWITSRQIEAGRRAMTRN RRG KIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAISIAASKMPI+TQFI S
Subjt:  AENIARKAISIAASKMPIRTQFITS

Q4VZN1 50S ribosomal protein L16, chloroplastic3.0e-6598.4Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RKHHRGRMKGISYRGN ICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRG KIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
        AENIARKAISIAASKMPIRTQFITS
Subjt:  AENIARKAISIAASKMPIRTQFITS

Arabidopsis top hitse value%identityAlignment
AT2G28830.1 PLANT U-BOX 123.3e-4369.84Show/hide
Query:  RKHHRGRM-KGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSG
        +KHHRGR+ KG+S +G  IC  RYA+Q LEPAWITSRQIEAGRRAMTRN  RG  + V IF DKPVT+RP ETRMG GKG+P +WVAVVKPG+I+YEM G
Subjt:  RKHHRGRM-KGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSG

Query:  VAENIARKAISIAASKMPIRTQFITS
        V+E +AR+AISIAASK+P +T+FI S
Subjt:  VAENIARKAISIAASKMPIRTQFITS

ATCG00790.1 ribosomal protein L163.0e-6088.8Show/hide
Query:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV
        RK HRGR+KGIS RGNRICFGRYA+Q LEPAWITSRQIEAGRRAMTRN RRG KIWVRIFPDKPVT+RP ETRMGSGKGSPEYWVAVVKPG+ILYEM GV
Subjt:  RKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV

Query:  AENIARKAISIAASKMPIRTQFITS
         ENIARKAISIAASKMPI+TQFI S
Subjt:  AENIARKAISIAASKMPIRTQFITS

ATMG00080.1 ribosomal protein L167.9e-2141.98Show/hide
Query:  KHHRGR-MKGISYRGNRICFGRYAIQALEPAWITSRQIEAGR--------RAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGR
        K+ +GR  +G    G ++ FGRY  ++ +   ++ R IEA R        RAM+   RR  KIWVR+F D P+T +PTE RMG GKG+P  W+A V  G+
Subjt:  KHHRGR-MKGISYRGNRICFGRYAIQALEPAWITSRQIEAGR--------RAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGR

Query:  ILYEMSGVAENIARKAISIAASKMPIRTQFI
        I +EM GV+   AR+A ++AA K    T+F+
Subjt:  ILYEMSGVAENIARKAISIAASKMPIRTQFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTATCGAAGCTTCACGAGTCAGACTCGGATCCCTACCTCATCCTCTTGCAGATCTTTTATCCACAACCATTTTCATCTTCGTAAACACCATAGAGGAAGA
ATGAAAGGAATATCTTATCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAAGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGA
AGGGCAATGACACGAAATGCACGACGCGGCAGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGG
AAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGAGTGGAGTAGCCGAAAATATAGCCAGAAAAGCTATTTCAATAGCG
GCATCAAAAATGCCTATACGAACCCAATTCATTACTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTATCGAAGCTTCACGAGTCAGACTCGGATCCCTACCTCATCCTCTTGCAGATCTTTTATCCACAACCATTTTCATCTTCGTAAACACCATAGAGGAAGA
ATGAAAGGAATATCTTATCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAAGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGA
AGGGCAATGACACGAAATGCACGACGCGGCAGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGG
AAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGAGTGGAGTAGCCGAAAATATAGCCAGAAAAGCTATTTCAATAGCG
GCATCAAAAATGCCTATACGAACCCAATTCATTACTTCGTGA
Protein sequenceShow/hide protein sequence
MTYRSFTSQTRIPTSSSCRSFIHNHFHLRKHHRGRMKGISYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGRKIWVRIFPDKPVTLRPTETRMGSG
KGSPEYWVAVVKPGRILYEMSGVAENIARKAISIAASKMPIRTQFITS